RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 PLIN3O60664 434 aa14.42□□□□□ -0.1
COL7A1-204ENST00000462475 SS18L1O75177 396 aaPredicted RBP14.42□□□□□ -0.1
COL7A1-204ENST00000462475 SEC22BO75396 215 aa14.42□□□□□ -0.1
COL7A1-204ENST00000462475 OPN1LWP04000 364 aa14.42□□□□□ -0.1
COL7A1-204ENST00000462475 UROSP10746 265 aa14.42□□□□□ -0.1
COL7A1-204ENST00000462475 ACP2P11117 423 aa14.42□□□□□ -0.1
COL7A1-204ENST00000462475 PRPH2P23942 346 aa14.42□□□□□ -0.1
COL7A1-204ENST00000462475 GPC1P35052 558 aa14.42□□□□□ -0.1
COL7A1-204ENST00000462475 PRKAG1P54619 331 aa14.42□□□□□ -0.1
COL7A1-204ENST00000462475 DNAJB13P59910 316 aa14.42□□□□□ -0.1
COL7A1-204ENST00000462475 CFAP157Q5JU67 520 aa14.42□□□□□ -0.1
COL7A1-204ENST00000462475 SZRD1Q7Z422 152 aa14.42□□□□□ -0.1
COL7A1-204ENST00000462475 IFT20Q8IY31 132 aa14.42□□□□□ -0.1
COL7A1-204ENST00000462475 GSPT2Q8IYD1 628 aaKnown RBP14.42□□□□□ -0.1
COL7A1-204ENST00000462475 GTPBP8Q8N3Z3 284 aaPredicted RBP14.42□□□□□ -0.1
COL7A1-204ENST00000462475 GIMAP5Q96F15 307 aa14.42□□□□□ -0.1
COL7A1-204ENST00000462475 OTUB1Q96FW1 271 aaPredicted RBP14.42□□□□□ -0.1
COL7A1-204ENST00000462475 GMPPAQ96IJ6 420 aaPredicted RBP14.42□□□□□ -0.1
COL7A1-204ENST00000462475 TMEM185BQ9H7F4 350 aa14.42□□□□□ -0.1
COL7A1-204ENST00000462475 LRTM1Q9HBL6 345 aa14.42□□□□□ -0.1
COL7A1-204ENST00000462475 PLSCR4Q9NRQ2 329 aa14.42□□□□□ -0.1
COL7A1-204ENST00000462475 RAI1Q7Z5J4 1906 aaPredicted RBP14.42□□□□□ -0.1
COL7A1-204ENST00000462475 PCNX3Q9H6A9 2034 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 UQCRHLA0A096LP55 91 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 A0A1W2PRB8 838 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 NPIPB8E9PQR5 432 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 KLF4O43474 513 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 AKAP10O43572 662 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 NDUFB5O43674 189 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 CXCL13O43927 109 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 PLGP00747 810 aaPredicted RBP14.41□□□□□ -0.1
COL7A1-204ENST00000462475 NGFRP08138 427 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 SDC1P18827 310 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 PSMA4P25789 261 aaKnown RBP14.41□□□□□ -0.1
COL7A1-204ENST00000462475 PTH2RP49190 550 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 CTBP2P56545 445 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 NAA20P61599 178 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 SLC18A2Q05940 514 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 PLPPR5Q32ZL2 321 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 VPS26BQ4G0F5 336 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 BEX5Q5H9J7 111 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 FIGNL1Q6PIW4 674 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 STAC2Q6ZMT1 411 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 WDR75Q8IWA0 830 aaKnown RBP14.41□□□□□ -0.1
COL7A1-204ENST00000462475 CDRT4Q8N9R6 151 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 SLC16A11Q8NCK7 471 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 NUP43Q8NFH3 380 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 OR2T11Q8NH01 316 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 CLHC1Q8NHS4 586 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 NUDT8Q8WV74 236 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 IGFBPL1Q8WX77 278 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 ZNF764Q96H86 408 aaPredicted RBP14.41□□□□□ -0.1
COL7A1-204ENST00000462475 SH3YL1Q96HL8 342 aaPredicted RBP14.41□□□□□ -0.1
COL7A1-204ENST00000462475 FCRL1Q96LA6 429 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 RNF145Q96MT1 663 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 TSSK3Q96PN8 268 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 CCT7Q99832 543 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 BDH2Q9BUT1 245 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 GSX2Q9BZM3 304 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 REEP4Q9H6H4 257 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 MED17Q9NVC6 651 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 FBXO34Q9NWN3 711 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 C1orf109Q9NX04 203 aa14.41□□□□□ -0.1
COL7A1-204ENST00000462475 ROS1P08922 2347 aa14.4□□□□□ -0.1
COL7A1-204ENST00000462475 A0A087WZY1 265 aa14.4□□□□□ -0.1
COL7A1-204ENST00000462475 TNFSF11O14788 317 aa14.4□□□□□ -0.1
COL7A1-204ENST00000462475 KCNK2O95069 426 aa14.4□□□□□ -0.1
COL7A1-204ENST00000462475 PLAUP00749 431 aa14.4□□□□□ -0.1
COL7A1-204ENST00000462475 EFNA1P20827 205 aaPredicted RBP14.4□□□□□ -0.1
COL7A1-204ENST00000462475 PCSK6P29122 969 aa14.4□□□□□ -0.1
COL7A1-204ENST00000462475 FRKP42685 505 aaPredicted RBP14.4□□□□□ -0.1
COL7A1-204ENST00000462475 RPL38P63173 70 aaKnown RBP14.4□□□□□ -0.1
COL7A1-204ENST00000462475 PDE7AQ13946 482 aa14.4□□□□□ -0.1
COL7A1-204ENST00000462475 DUSP5Q16690 384 aa14.4□□□□□ -0.1
COL7A1-204ENST00000462475 CCDC153Q494R4 210 aa14.4□□□□□ -0.1
COL7A1-204ENST00000462475 MFSD12Q6NUT3 480 aa14.4□□□□□ -0.1
COL7A1-204ENST00000462475 ZNF704Q6ZNC4 412 aaPredicted RBP14.4□□□□□ -0.1
COL7A1-204ENST00000462475 Q6ZSR9 355 aa14.4□□□□□ -0.1
COL7A1-204ENST00000462475 PRIMA1Q86XR5 153 aa14.4□□□□□ -0.1
COL7A1-204ENST00000462475 OR2V1Q8NHB1 315 aa14.4□□□□□ -0.1
COL7A1-204ENST00000462475 ZFP28Q8NHY6 868 aa14.4□□□□□ -0.1
COL7A1-204ENST00000462475 POC1BQ8TC44 478 aa14.4□□□□□ -0.1
COL7A1-204ENST00000462475 FAM110BQ8TC76 370 aa14.4□□□□□ -0.1
COL7A1-204ENST00000462475 ZBTB8AQ96BR9 441 aa14.4□□□□□ -0.1
COL7A1-204ENST00000462475 PPCDCQ96CD2 204 aa14.4□□□□□ -0.1
COL7A1-204ENST00000462475 ZBED6CLQ96FA7 236 aaPredicted RBP14.4□□□□□ -0.1
COL7A1-204ENST00000462475 C16orf58Q96GQ5 468 aa14.4□□□□□ -0.1
COL7A1-204ENST00000462475 METTL2AQ96IZ6 378 aaKnown RBP14.4□□□□□ -0.1
COL7A1-204ENST00000462475 MS4A4EQ96PG1 132 aa14.4□□□□□ -0.1
COL7A1-204ENST00000462475 OXSMQ9NWU1 459 aa14.4□□□□□ -0.1
COL7A1-204ENST00000462475 NTMQ9P121 344 aa14.4□□□□□ -0.1
COL7A1-204ENST00000462475 STOML1Q9UBI4 398 aa14.4□□□□□ -0.1
COL7A1-204ENST00000462475 MCTS1Q9ULC4 181 aaKnown RBP14.4□□□□□ -0.1
COL7A1-204ENST00000462475 FIS1Q9Y3D6 152 aa14.4□□□□□ -0.1
COL7A1-204ENST00000462475 A0A0J9YW62 118 aa14.39□□□□□ -0.11
COL7A1-204ENST00000462475 C7orf72A4D263 438 aa14.39□□□□□ -0.11
COL7A1-204ENST00000462475 SLC28A1O00337 649 aa14.39□□□□□ -0.11
COL7A1-204ENST00000462475 ADAMDEC1O15204 470 aa14.39□□□□□ -0.11
COL7A1-204ENST00000462475 RGS14O43566 566 aa14.39□□□□□ -0.11
COL7A1-204ENST00000462475 TBX19O60806 448 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms