RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 EMC4Q5J8M3 183 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 C6orf10Q5SRN2 563 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 C1orf185Q5T7R7 199 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 C16orf62Q7Z3J2 963 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 PLCZ1Q86YW0 608 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 MARVELD2Q8N4S9 558 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 ZNF527Q8NB42 609 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 NEIL3Q8TAT5 605 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 RNF138Q8WVD3 245 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 XAGE5Q8WWM1 108 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 VPS33AQ96AX1 596 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 SPDL1Q96EA4 605 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 C14orf79Q96F83 325 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 LRRC46Q96FV0 321 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 OTUB1Q96FW1 271 aaPredicted RBP12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 GNRHR2Q96P88 292 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 TTYH2Q9BSA4 534 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 INPP5KQ9BT40 448 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 TRIM8Q9BZR9 551 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 ENKD1Q9H0I2 346 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 OR51I1Q9H343 314 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 ZNF703Q9H7S9 590 aaPredicted RBP12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 GALNT9Q9HCQ5 603 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 PPP4R1LQ9P1A2 415 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 KLHL14Q9P2G3 628 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 C15orf41Q9Y2V0 281 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 HRH3Q9Y5N1 445 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 LIPGQ9Y5X9 500 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 PCNX1Q96RV3 2341 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 ITPR2Q14571 2701 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 C15orf38-AP3S2A0A0A6YYH1 394 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 H3BNH8 94 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 SCDO00767 359 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 NDUFB5O43674 189 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 SCO2O43819 266 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 STX11O75558 287 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 GSNP06396 782 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 CELA3AP09093 270 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 ENDOUP21128 410 aaKnown RBP12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 PTPN6P29350 595 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 RPS26P62854 115 aaKnown RBP12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 RCAN2Q14206 197 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 GRAMD1BQ3KR37 738 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 ARHGAP11BQ3KRB8 267 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 DCST2Q5T1A1 773 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 FNDC7Q5VTL7 733 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 TNFAIP8L2Q6P589 184 aaPredicted RBP12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 CCDC71Q8IV32 467 aaPredicted RBP12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 FUNDC1Q8IVP5 155 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 MISPQ8IVT2 679 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 PM20D2Q8IYS1 436 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 CLEC4FQ8N1N0 589 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 CHDHQ8NE62 594 aaPredicted RBP12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 OR4K17Q8NGC6 315 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 DUSP19Q8WTR2 217 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 TSPEARQ8WU66 669 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 LURAP1Q96LR2 239 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 ZNF317Q96PQ6 595 aaPredicted RBP12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 SDF2Q99470 211 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 RAD21L1Q9H4I0 556 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 PTGES2Q9H7Z7 377 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 SERHLQ9NQF3 203 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 KCNE3Q9Y6H6 103 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 NCKAP5O14513 1909 aa12.05□□□□□ -0.48
RAB11FIP3-207ENST00000461009 A0A096LPI6 279 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 A0A1W2PP18 115 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 NKX2-6A6NCS4 301 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 HSPB2A8KAH6 182 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 AHRRA9YTQ3 701 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 ALG1L2C9J202 215 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 NR5A2O00482 541 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 OXSR1O95747 527 aaPredicted RBP12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 ANGPTL1O95841 491 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 HPNP05981 417 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 OR12D1P0DN82 309 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 GLI4P10075 376 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 CDKN2CP42773 168 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 ATP12AP54707 1039 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 GAS1P54826 345 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 TLE4Q04727 773 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 HSPB2Q16082 182 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 FLYWCH1Q4VC44 716 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 CCNJQ5T5M9 372 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 GALNT10Q86SR1 603 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 MARCH3Q86UD3 253 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 RNF130Q86XS8 419 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 WDSUB1Q8N9V3 476 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 OR5D16Q8NGK9 328 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 OR4C3Q8NH37 302 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 ZFP90Q8TF47 636 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 GTF2H4Q92759 462 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 UCK2Q9BZX2 261 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 NSRP1Q9H0G5 558 aaKnown RBP12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 UBQLN3Q9H347 655 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 POLE3Q9NRF9 147 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 THUMPD1Q9NXG2 353 aaKnown RBP12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 LIPT1Q9Y234 373 aa12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 MRPS18CQ9Y3D5 142 aaKnown RBP12.04□□□□□ -0.48
RAB11FIP3-207ENST00000461009 A0A1W2PQD3 144 aa12.03□□□□□ -0.48
RAB11FIP3-207ENST00000461009 TMEM247A6NEH6 219 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms