RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 A0A0G2JNG1 304 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 I3L1I5 382 aaPredicted RBP13.88□□□□□ -0.19
PTPRU-205ENST00000460170 KIR2DS3K7RE56 304 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 TOXO94900 526 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 ITGBL1O95965 494 aaPredicted RBP13.88□□□□□ -0.19
PTPRU-205ENST00000460170 JUNBP17275 347 aaPredicted RBP13.88□□□□□ -0.19
PTPRU-205ENST00000460170 PCSK6P29122 969 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 KIR2DS5Q14953 304 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 SLC22A10Q63ZE4 541 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 KCTD9Q7L273 389 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 TMPRSS9Q7Z410 1059 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 EGFL6Q8IUX8 553 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 PARP16Q8N5Y8 322 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 PPP4R1LQ9P1A2 415 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 KNL1Q8NG31 2342 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 TSPAN31Q12999 210 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 IQCF2Q8IXL9 164 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 C12orf4Q9NQ89 552 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 PPT2Q9UMR5 302 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 NAALAD2Q9Y3Q0 740 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 IL1AP01583 271 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 ATF4P18848 351 aaPredicted RBP13.87□□□□□ -0.19
PTPRU-205ENST00000460170 PITPNBP48739 271 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 BCL7AQ4VC05 210 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 HENMT1Q5T8I9 393 aaKnown RBP13.87□□□□□ -0.19
PTPRU-205ENST00000460170 ZER1Q7Z7L7 766 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 TMEM151BQ8IW70 566 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 ENTHD1Q8IYW4 607 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 TMEM38AQ9H6F2 299 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 MRPL15Q9P015 296 aaKnown RBP13.87□□□□□ -0.19
PTPRU-205ENST00000460170 FBXO9Q9UK97 447 aaPredicted RBP13.87□□□□□ -0.19
PTPRU-205ENST00000460170 ZNF443Q9Y2A4 671 aaPredicted RBP13.87□□□□□ -0.19
PTPRU-205ENST00000460170 CPMP14384 443 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 SFRP4Q6FHJ7 346 aaPredicted RBP13.87□□□□□ -0.19
PTPRU-205ENST00000460170 SLC35F2Q8IXU6 374 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 NEURL3Q96EH8 262 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 PRSS16Q9NQE7 514 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 IL37Q9NZH6 218 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 NDUFAF4Q9P032 175 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 FAM183AA6NL82 134 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 ZNF217O75362 1048 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 TRAPPC6AO75865 159 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 GPR75O95800 540 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 F3P13726 295 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 DEFA5Q01523 94 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 KDM4DQ6B0I6 523 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 KCMF1Q9P0J7 381 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 MGAT4CQ9UBM8 478 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 DKKL1Q9UK85 242 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 ALG5Q9Y673 324 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 NUMBLQ9Y6R0 609 aa13.87□□□□□ -0.19
PTPRU-205ENST00000460170 FXYD1O00168 92 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 CREBL2O60519 120 aaPredicted RBP13.86□□□□□ -0.19
PTPRU-205ENST00000460170 PLGP00747 810 aaPredicted RBP13.86□□□□□ -0.19
PTPRU-205ENST00000460170 PNMTP11086 282 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 MBTPS1Q14703 1052 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 ALG10Q5BKT4 473 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 ADAMTSL4Q6UY14 1074 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 PLPP6Q8IY26 295 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 OR4C15Q8NGM1 316 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 OR5AK2Q8NH90 309 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 BMFQ96LC9 184 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 HYLS1Q96M11 299 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 MMP28Q9H239 520 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 KLK4Q9Y5K2 254 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 TEX13DA0A0J9YY54 714 aaPredicted RBP13.86□□□□□ -0.19
PTPRU-205ENST00000460170 GFYI3L273 518 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 PTHP01270 115 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 SSTR4P31391 388 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 MCCD1P59942 119 aaPredicted RBP13.86□□□□□ -0.19
PTPRU-205ENST00000460170 ILKQ13418 452 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 EXOSC7Q15024 291 aaKnown RBP13.86□□□□□ -0.19
PTPRU-205ENST00000460170 C1orf189Q5VU69 101 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 FOXRED2Q8IWF2 684 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 FAM3CQ92520 227 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 C14orf166Q9Y224 244 aaKnown RBP13.86□□□□□ -0.19
PTPRU-205ENST00000460170 ARHGAP33O14559 1287 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 GABARAPO95166 117 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 PVRP15151 417 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 FXYD6P3P58550 94 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 ATXN7L3Q14CW9 347 aaPredicted RBP13.86□□□□□ -0.19
PTPRU-205ENST00000460170 INAVAQ3KP66 663 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 HES5Q5TA89 166 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 FAM71E1Q6IPT2 247 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 SLC18B1Q6NT16 456 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 MFSD9Q8NBP5 474 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 OR5L2Q8NGL0 311 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 LINC01599Q8WXQ3 324 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 BTBD2Q9BX70 525 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 STARD5Q9NSY2 213 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 KLHL9Q9P2J3 617 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 NUFIP1Q9UHK0 495 aaKnown RBP13.86□□□□□ -0.19
PTPRU-205ENST00000460170 DLEC1Q9Y238 1755 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 TEX13CA0A0J9YWL9 993 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 ZSCAN5BA6NJL1 495 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 ACPPP15309 386 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 REEP5Q00765 189 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 HSF5Q4G112 596 aaPredicted RBP13.86□□□□□ -0.19
PTPRU-205ENST00000460170 PDSS1Q5T2R2 415 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 BCL2L15Q5TBC7 163 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms