RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 TAS2R41P59536 307 aa22.53■■□□□ 1.2
U2AF1-204ENST00000459639 TTC23Q5W5X9 447 aa22.53■■□□□ 1.2
U2AF1-204ENST00000459639 SLC5A8Q8N695 610 aa22.53■■□□□ 1.2
U2AF1-204ENST00000459639 ZNF614Q8N883 585 aa22.53■■□□□ 1.2
U2AF1-204ENST00000459639 OR2Y1Q8NGV0 311 aa22.53■■□□□ 1.2
U2AF1-204ENST00000459639 DIO2Q92813 273 aa22.53■■□□□ 1.2
U2AF1-204ENST00000459639 GATA6Q92908 595 aa22.53■■□□□ 1.2
U2AF1-204ENST00000459639 SLC35B4Q969S0 331 aa22.53■■□□□ 1.2
U2AF1-204ENST00000459639 FEVQ99581 238 aa22.53■■□□□ 1.2
U2AF1-204ENST00000459639 MCHR1Q99705 422 aa22.53■■□□□ 1.2
U2AF1-204ENST00000459639 MESP1Q9BRJ9 268 aa22.53■■□□□ 1.2
U2AF1-204ENST00000459639 UBAP1Q9NZ09 502 aa22.53■■□□□ 1.2
U2AF1-204ENST00000459639 ZNF223Q9UK11 482 aaPredicted RBP22.53■■□□□ 1.2
U2AF1-204ENST00000459639 PADI1Q9ULC6 663 aa22.53■■□□□ 1.2
U2AF1-204ENST00000459639 PTRH2Q9Y3E5 179 aaKnown RBP22.53■■□□□ 1.2
U2AF1-204ENST00000459639 A0A1W2PNU3 283 aaPredicted RBP22.52■■□□□ 1.2
U2AF1-204ENST00000459639 ITGAMP11215 1152 aa22.52■■□□□ 1.2
U2AF1-204ENST00000459639 RNF4P78317 190 aa22.52■■□□□ 1.2
U2AF1-204ENST00000459639 KCNAB2Q13303 367 aa22.52■■□□□ 1.2
U2AF1-204ENST00000459639 SWT1Q5T5J6 900 aaKnown RBP22.52■■□□□ 1.2
U2AF1-204ENST00000459639 TMEM164Q5U3C3 297 aa22.52■■□□□ 1.2
U2AF1-204ENST00000459639 UGT2A3Q6UWM9 527 aa22.52■■□□□ 1.2
U2AF1-204ENST00000459639 HSDL2Q6YN16 418 aa22.52■■□□□ 1.2
U2AF1-204ENST00000459639 USP51Q70EK9 711 aa22.52■■□□□ 1.2
U2AF1-204ENST00000459639 ZNF555Q8NEP9 628 aa22.52■■□□□ 1.2
U2AF1-204ENST00000459639 TP53INP1Q96A56 240 aa22.52■■□□□ 1.2
U2AF1-204ENST00000459639 EFHD2Q96C19 240 aaPredicted RBP22.52■■□□□ 1.2
U2AF1-204ENST00000459639 SPRY4Q9C004 299 aa22.52■■□□□ 1.2
U2AF1-204ENST00000459639 ANKRD19PQ9H560 264 aa22.52■■□□□ 1.2
U2AF1-204ENST00000459639 MAN2C1Q9NTJ4 1040 aa22.52■■□□□ 1.2
U2AF1-204ENST00000459639 FAM118AQ9NWS6 357 aa22.52■■□□□ 1.2
U2AF1-204ENST00000459639 TESQ9UGI8 421 aaKnown RBP22.52■■□□□ 1.2
U2AF1-204ENST00000459639 C9orf172C9J069 976 aa22.52■■□□□ 1.2
U2AF1-204ENST00000459639 PRKNO60260 465 aaPredicted RBP22.52■■□□□ 1.2
U2AF1-204ENST00000459639 FMO6PO60774 539 aa22.52■■□□□ 1.2
U2AF1-204ENST00000459639 MITFO75030 526 aaPredicted RBP22.52■■□□□ 1.2
U2AF1-204ENST00000459639 SEC24DO94855 1032 aaPredicted RBP22.52■■□□□ 1.2
U2AF1-204ENST00000459639 OR5F1O95221 314 aa22.52■■□□□ 1.2
U2AF1-204ENST00000459639 UMODP07911 640 aa22.52■■□□□ 1.2
U2AF1-204ENST00000459639 NR0B1P51843 470 aaKnown RBP22.52■■□□□ 1.2
U2AF1-204ENST00000459639 SLC26A5P58743 744 aa22.52■■□□□ 1.2
U2AF1-204ENST00000459639 PLAURQ03405 335 aa22.52■■□□□ 1.2
U2AF1-204ENST00000459639 ENTPD8Q5MY95 495 aa22.52■■□□□ 1.2
U2AF1-204ENST00000459639 PLEKHM3Q6ZWE6 761 aa22.52■■□□□ 1.2
U2AF1-204ENST00000459639 SLC34A3Q8N130 599 aa22.52■■□□□ 1.2
U2AF1-204ENST00000459639 OR9Q2Q8NGE9 314 aa22.52■■□□□ 1.2
U2AF1-204ENST00000459639 OR8K3Q8NH51 312 aa22.52■■□□□ 1.2
U2AF1-204ENST00000459639 NUBPLQ8TB37 319 aa22.52■■□□□ 1.2
U2AF1-204ENST00000459639 NRSN2Q9GZP1 204 aa22.52■■□□□ 1.2
U2AF1-204ENST00000459639 UBQLN4Q9NRR5 601 aa22.52■■□□□ 1.2
U2AF1-204ENST00000459639 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.51■■□□□ 1.19
U2AF1-204ENST00000459639 CPSF4LA6NMK7 179 aaKnown RBP22.51■■□□□ 1.19
U2AF1-204ENST00000459639 GNAO1P09471 354 aa22.51■■□□□ 1.19
U2AF1-204ENST00000459639 CBLP22681 906 aa22.51■■□□□ 1.19
U2AF1-204ENST00000459639 FOLR3P41439 243 aa22.51■■□□□ 1.19
U2AF1-204ENST00000459639 ST3GAL3Q11203 375 aa22.51■■□□□ 1.19
U2AF1-204ENST00000459639 ZNF770Q6IQ21 691 aaPredicted RBP22.51■■□□□ 1.19
U2AF1-204ENST00000459639 KRT80Q6KB66 452 aa22.51■■□□□ 1.19
U2AF1-204ENST00000459639 GALNT5Q7Z7M9 940 aa22.51■■□□□ 1.19
U2AF1-204ENST00000459639 LINC00471Q8N535 108 aa22.51■■□□□ 1.19
U2AF1-204ENST00000459639 ZNF527Q8NB42 609 aa22.51■■□□□ 1.19
U2AF1-204ENST00000459639 SLC7A13Q8TCU3 470 aa22.51■■□□□ 1.19
U2AF1-204ENST00000459639 C8orf44Q96CB5 159 aa22.51■■□□□ 1.19
U2AF1-204ENST00000459639 POFUT2Q9Y2G5 429 aa22.51■■□□□ 1.19
U2AF1-204ENST00000459639 SH3PXD2BA1X283 911 aa22.5■■□□□ 1.19
U2AF1-204ENST00000459639 MAGEA13PA6NCF6 341 aa22.5■■□□□ 1.19
U2AF1-204ENST00000459639 IGHEP01854 428 aa22.5■■□□□ 1.19
U2AF1-204ENST00000459639 FTH1P19P0C7X4 201 aa22.5■■□□□ 1.19
U2AF1-204ENST00000459639 KRT20P35900 424 aa22.5■■□□□ 1.19
U2AF1-204ENST00000459639 CHN2P52757 468 aa22.5■■□□□ 1.19
U2AF1-204ENST00000459639 HOXC5Q00444 222 aa22.5■■□□□ 1.19
U2AF1-204ENST00000459639 TRAM2Q15035 370 aa22.5■■□□□ 1.19
U2AF1-204ENST00000459639 SEC23BQ15437 767 aa22.5■■□□□ 1.19
U2AF1-204ENST00000459639 C3orf38Q5JPI3 329 aa22.5■■□□□ 1.19
U2AF1-204ENST00000459639 OR4C3Q8NH37 302 aa22.5■■□□□ 1.19
U2AF1-204ENST00000459639 ADAMTS16Q8TE57 1224 aa22.5■■□□□ 1.19
U2AF1-204ENST00000459639 ZNF556Q9HAH1 456 aa22.5■■□□□ 1.19
U2AF1-204ENST00000459639 CTPS2Q9NRF8 586 aa22.5■■□□□ 1.19
U2AF1-204ENST00000459639 PAPOLBQ9NRJ5 636 aaKnown RBP22.5■■□□□ 1.19
U2AF1-204ENST00000459639 DNAJB12Q9NXW2 375 aaKnown RBP22.5■■□□□ 1.19
U2AF1-204ENST00000459639 EXPH5Q8NEV8 1989 aa22.5■■□□□ 1.19
U2AF1-204ENST00000459639 SDK2Q58EX2 2172 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 SERINC4A6NH21 518 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 SLC16A6O15403 523 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 TSPAN2O60636 221 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 CYP7B1O75881 506 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 RAB40ALP0C0E4 278 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 UBTFL6P0CB48 400 aaPredicted RBP22.49■■□□□ 1.19
U2AF1-204ENST00000459639 IL12BP29460 328 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 IL1RL1Q01638 556 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 PLCXD2Q0VAA5 305 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 KLHL26Q53HC5 615 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 TIPARPQ7Z3E1 657 aaKnown RBP22.49■■□□□ 1.19
U2AF1-204ENST00000459639 CACTIN-AS1Q8N1I8 211 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 TOR1AIP2Q8NFQ8 470 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 CNOT9Q92600 299 aaKnown RBP22.49■■□□□ 1.19
U2AF1-204ENST00000459639 PRR14Q9BWN1 585 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 GABARAPL3Q9BY60 117 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 TRBV11-1A0A0K0K1C0 115 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 CDC14CA4D256 554 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms