RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 STK17BO94768 372 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 CLEC3BP05452 202 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 SMAGPQ0VAQ4 97 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 GRINAQ7Z429 371 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 TMED4Q7Z7H5 227 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 IGFN1Q86VF2 1251 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 PRRC1Q96M27 445 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 LMAN1LQ9HAT1 526 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 RRAGCQ9HB90 399 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 DTLQ9NZJ0 730 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 CORINQ9Y5Q5 1042 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 TMEM72A0PK05 275 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 MEIOCA2RUB1 952 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 IFI30P13284 250 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 ICAM2P13598 275 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 HMGCLP35914 325 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 GCGRP47871 477 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 LILRA4P59901 499 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF792Q3KQV3 632 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 ATAD3CQ5T2N8 411 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 FAM151BQ6UXP7 276 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 OR7D4Q8NG98 312 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 LRRN4Q8WUT4 740 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 SLC30A3Q99726 388 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 HRH4Q9H3N8 390 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 TAS2R14Q9NYV8 317 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 GNG8Q9UK08 70 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 UTS2RQ9UKP6 389 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 PRRC2AP48634 2157 aaKnown RBP4.95□□□□□ -1.62
CSMD3-204ENST00000455883 TMEM129A0AVI4 362 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 ST8SIA5O15466 376 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 SRPX2O60687 465 aaPredicted RBP4.95□□□□□ -1.62
CSMD3-204ENST00000455883 PSMB1P20618 241 aaKnown RBP4.95□□□□□ -1.62
CSMD3-204ENST00000455883 BDNFP23560 247 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 KDELR2P33947 212 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 CX3CR1P49238 355 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 PCLAFQ15004 111 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 AMZ1Q400G9 498 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 SERPINA9Q86WD7 417 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 OR9A1PQ8NGU1 263 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 PINK1Q9BXM7 581 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 ENPP4Q9Y6X5 453 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 PSME4Q14997 1843 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 KIR2DS1A0A191URI9 304 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 RFXAPO00287 272 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 KIR2DS4P43632 304 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 ENTPD1P49961 510 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 SMAD3P84022 425 aaKnown RBP4.95□□□□□ -1.62
CSMD3-204ENST00000455883 KCNAB2Q13303 367 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 KIR2DS1Q14954 304 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 MANEAQ5SRI9 462 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 RHBDF2Q6PJF5 856 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 SULF2Q8IWU5 870 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 GCNT2Q8N0V5 402 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 KDF1Q8NAX2 398 aaPredicted RBP4.95□□□□□ -1.62
CSMD3-204ENST00000455883 SYT17Q9BSW7 474 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 PNPOQ9NVS9 261 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 NFS1Q9Y697 457 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 DENND4CQ5VZ89 1909 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 PRAMEF22A3QJZ6 481 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 FAM155BO75949 473 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 YIF1AO95070 293 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 MAOBP27338 520 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 CHRNA4P43681 627 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 ERFP50548 548 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 SEC61A1P61619 476 aaKnown RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 HNRNPA0Q13151 305 aaKnown RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 CATR1Q13166 79 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 FGFBP1Q14512 234 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 EOGTQ5NDL2 527 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 COMMD7Q86VX2 200 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 MCATQ8IVS2 390 aaKnown RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 DND1Q8IYX4 353 aaKnown RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 CDRT4Q8N9R6 151 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 OR6C4Q8NGE1 309 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 OR8J2Q8NGG1 315 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 PLEKHA2Q9HB19 425 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 PLCXD1Q9NUJ7 323 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 CAMK2AQ9UQM7 478 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 A0A1B0GTW7 788 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 A0A1W2PPH5 198 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 A0A1W2PQL4 384 aaPredicted RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 PPP5D1E7EU14 171 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 TRIM77I1YAP6 450 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 ADRB1P08588 477 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 AKR1C4P17516 323 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 EDNRAP25101 427 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 S100A11P31949 105 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 GIPRP48546 466 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 GPR19Q15760 415 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 TSTQ16762 297 aaKnown RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 ITPRIPL2Q3MIP1 535 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 PRSS35Q8N3Z0 413 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 CD200R1Q8TD46 325 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 SLC35B4Q969S0 331 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 PBX4Q9BYU1 374 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 CNTNAP3Q9BZ76 1288 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 PRDM9Q9NQV7 894 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 SLC39A9Q9NUM3 307 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms