RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 TMEM107Q6UX40 140 aa20.64■□□□□ 0.89
PTPRA-208ENST00000455631 SEZ6L2Q6UXD5 910 aa20.64■□□□□ 0.89
PTPRA-208ENST00000455631 APOOLQ6UXV4 268 aa20.64■□□□□ 0.89
PTPRA-208ENST00000455631 PLD6Q8N2A8 252 aaKnown RBP20.64■□□□□ 0.89
PTPRA-208ENST00000455631 GTPBP8Q8N3Z3 284 aaPredicted RBP20.64■□□□□ 0.89
PTPRA-208ENST00000455631 ABHD3Q8WU67 409 aa20.64■□□□□ 0.89
PTPRA-208ENST00000455631 ROBO4Q8WZ75 1007 aa20.64■□□□□ 0.89
PTPRA-208ENST00000455631 RNF145Q96MT1 663 aa20.64■□□□□ 0.89
PTPRA-208ENST00000455631 CACNG6Q9BXT2 260 aa20.64■□□□□ 0.89
PTPRA-208ENST00000455631 RNF14Q9UBS8 474 aa20.64■□□□□ 0.89
PTPRA-208ENST00000455631 ALPK2Q86TB3 2170 aa20.63■□□□□ 0.89
PTPRA-208ENST00000455631 A0A087WZY1 265 aa20.63■□□□□ 0.89
PTPRA-208ENST00000455631 A0A0J9YW62 118 aa20.63■□□□□ 0.89
PTPRA-208ENST00000455631 SMIM24O75264 130 aa20.63■□□□□ 0.89
PTPRA-208ENST00000455631 ADAP00813 363 aa20.63■□□□□ 0.89
PTPRA-208ENST00000455631 SRD5A1P18405 259 aa20.63■□□□□ 0.89
PTPRA-208ENST00000455631 ME2P23368 584 aa20.63■□□□□ 0.89
PTPRA-208ENST00000455631 THBS2P35442 1172 aa20.63■□□□□ 0.89
PTPRA-208ENST00000455631 DSCR9P59020 149 aa20.63■□□□□ 0.89
PTPRA-208ENST00000455631 RAC1P63000 192 aa20.63■□□□□ 0.89
PTPRA-208ENST00000455631 IRX1P78414 480 aaPredicted RBP20.63■□□□□ 0.89
PTPRA-208ENST00000455631 PRR5P85299 388 aa20.63■□□□□ 0.89
PTPRA-208ENST00000455631 ZNHIT3Q15649 155 aaPredicted RBP20.63■□□□□ 0.89
PTPRA-208ENST00000455631 GRAMD1BQ3KR37 738 aa20.63■□□□□ 0.89
PTPRA-208ENST00000455631 TCHHL1Q5QJ38 904 aaPredicted RBP20.63■□□□□ 0.89
PTPRA-208ENST00000455631 PDSS1Q5T2R2 415 aa20.63■□□□□ 0.89
PTPRA-208ENST00000455631 AGAP6Q5VW22 663 aa20.63■□□□□ 0.89
PTPRA-208ENST00000455631 CYB5R2Q6BCY4 276 aa20.63■□□□□ 0.89
PTPRA-208ENST00000455631 NUFIP2Q7Z417 695 aaKnown RBP20.63■□□□□ 0.89
PTPRA-208ENST00000455631 ARIH2OSQ8N7S6 290 aa20.63■□□□□ 0.89
PTPRA-208ENST00000455631 RNF128Q8TEB7 428 aa20.63■□□□□ 0.89
PTPRA-208ENST00000455631 REXO5Q96IC2 774 aaKnown RBP20.63■□□□□ 0.89
PTPRA-208ENST00000455631 MANSC1Q9H8J5 431 aa20.63■□□□□ 0.89
PTPRA-208ENST00000455631 DDX18Q9NVP1 670 aaKnown RBP20.63■□□□□ 0.89
PTPRA-208ENST00000455631 DMGDHQ9UI17 866 aaKnown RBP20.63■□□□□ 0.89
PTPRA-208ENST00000455631 FREM1Q5H8C1 2179 aa20.62■□□□□ 0.89
PTPRA-208ENST00000455631 A0A087WV62 115 aa20.62■□□□□ 0.89
PTPRA-208ENST00000455631 SHISA9B4DS77 424 aa20.62■□□□□ 0.89
PTPRA-208ENST00000455631 JUNP05412 331 aaKnown RBP20.62■□□□□ 0.89
PTPRA-208ENST00000455631 RPS17P08708 135 aaKnown RBP20.62■□□□□ 0.89
PTPRA-208ENST00000455631 RBP1P09455 135 aa20.62■□□□□ 0.89
PTPRA-208ENST00000455631 PABPC4LP0CB38 370 aaKnown RBP20.62■□□□□ 0.89
PTPRA-208ENST00000455631 PYGBP11216 843 aa20.62■□□□□ 0.89
PTPRA-208ENST00000455631 MAGEA4P43358 317 aa20.62■□□□□ 0.89
PTPRA-208ENST00000455631 NCBP2P52298 156 aaKnown RBP eCLIP20.62■□□□□ 0.89
PTPRA-208ENST00000455631 CDH13P55290 713 aa20.62■□□□□ 0.89
PTPRA-208ENST00000455631 RAE1P78406 368 aaKnown RBP20.62■□□□□ 0.89
PTPRA-208ENST00000455631 STK11Q15831 433 aa20.62■□□□□ 0.89
PTPRA-208ENST00000455631 TUSC5Q8IXB3 177 aa20.62■□□□□ 0.89
PTPRA-208ENST00000455631 C16orf78Q8WTQ4 265 aa20.62■□□□□ 0.89
PTPRA-208ENST00000455631 HTRA1Q92743 480 aa20.62■□□□□ 0.89
PTPRA-208ENST00000455631 OSTF1Q92882 214 aa20.62■□□□□ 0.89
PTPRA-208ENST00000455631 ZBTB8AQ96BR9 441 aa20.62■□□□□ 0.89
PTPRA-208ENST00000455631 ERP44Q9BS26 406 aa20.62■□□□□ 0.89
PTPRA-208ENST00000455631 EBPLQ9BY08 206 aa20.62■□□□□ 0.89
PTPRA-208ENST00000455631 GRHL1Q9NZI5 618 aa20.62■□□□□ 0.89
PTPRA-208ENST00000455631 KLHL13Q9P2N7 655 aa20.62■□□□□ 0.89
PTPRA-208ENST00000455631 C19orf53Q9UNZ5 99 aaPredicted RBP20.62■□□□□ 0.89
PTPRA-208ENST00000455631 A0A1W2PRB8 838 aa20.61■□□□□ 0.89
PTPRA-208ENST00000455631 ELOA3DA6NLF2 546 aaPredicted RBP20.61■□□□□ 0.89
PTPRA-208ENST00000455631 OR4F21O95013 312 aa20.61■□□□□ 0.89
PTPRA-208ENST00000455631 HSD3B1P14060 373 aa20.61■□□□□ 0.89
PTPRA-208ENST00000455631 CHN1P15882 459 aa20.61■□□□□ 0.89
PTPRA-208ENST00000455631 SLC25A16P16260 332 aa20.61■□□□□ 0.89
PTPRA-208ENST00000455631 HSD3B2P26439 372 aa20.61■□□□□ 0.89
PTPRA-208ENST00000455631 PAFAH1B1P43034 410 aa20.61■□□□□ 0.89
PTPRA-208ENST00000455631 ZNF41P51814 821 aaPredicted RBP20.61■□□□□ 0.89
PTPRA-208ENST00000455631 ZNF239Q16600 458 aaKnown RBP20.61■□□□□ 0.89
PTPRA-208ENST00000455631 PLPPR5Q32ZL2 321 aa20.61■□□□□ 0.89
PTPRA-208ENST00000455631 ELOA3BQ3SY89 546 aa20.61■□□□□ 0.89
PTPRA-208ENST00000455631 IL17RELQ6ZVW7 336 aa20.61■□□□□ 0.89
PTPRA-208ENST00000455631 BHLHA15Q7RTS1 189 aaPredicted RBP20.61■□□□□ 0.89
PTPRA-208ENST00000455631 ZNF525Q8N782 197 aa20.61■□□□□ 0.89
PTPRA-208ENST00000455631 GATSQ8NAP1 163 aa20.61■□□□□ 0.89
PTPRA-208ENST00000455631 ELOA3Q8NG57 546 aa20.61■□□□□ 0.89
PTPRA-208ENST00000455631 USB1Q9BQ65 265 aaKnown RBP20.61■□□□□ 0.89
PTPRA-208ENST00000455631 MED17Q9NVC6 651 aa20.61■□□□□ 0.89
PTPRA-208ENST00000455631 UPK1AO00322 258 aa20.6■□□□□ 0.89
PTPRA-208ENST00000455631 ABCD4O14678 606 aa20.6■□□□□ 0.89
PTPRA-208ENST00000455631 LMX1BO60663 402 aa20.6■□□□□ 0.89
PTPRA-208ENST00000455631 IGHV4-31P0DP07 118 aa20.6■□□□□ 0.89
PTPRA-208ENST00000455631 PSMA4P25789 261 aaKnown RBP20.6■□□□□ 0.89
PTPRA-208ENST00000455631 SFTPDP35247 375 aa20.6■□□□□ 0.89
PTPRA-208ENST00000455631 CARD18P57730 90 aa20.6■□□□□ 0.89
PTPRA-208ENST00000455631 ITGADQ13349 1161 aa20.6■□□□□ 0.89
PTPRA-208ENST00000455631 P2RY6Q15077 328 aa20.6■□□□□ 0.89
PTPRA-208ENST00000455631 RNPS1Q15287 305 aaKnown RBP20.6■□□□□ 0.89
PTPRA-208ENST00000455631 CDYL2Q8N8U2 506 aa20.6■□□□□ 0.89
PTPRA-208ENST00000455631 CDC26Q8NHZ8 85 aa20.6■□□□□ 0.89
PTPRA-208ENST00000455631 ZNF483Q8TF39 744 aaPredicted RBP20.6■□□□□ 0.89
PTPRA-208ENST00000455631 KLHL15Q96M94 604 aa20.6■□□□□ 0.89
PTPRA-208ENST00000455631 LMF2Q9BU23 707 aaKnown RBP20.6■□□□□ 0.89
PTPRA-208ENST00000455631 SHCBP1LQ9BZQ2 653 aa20.6■□□□□ 0.89
PTPRA-208ENST00000455631 C3orf14Q9HBI5 128 aa20.6■□□□□ 0.89
PTPRA-208ENST00000455631 NFU1Q9UMS0 254 aa20.6■□□□□ 0.89
PTPRA-208ENST00000455631 GXYLT2A0PJZ3 443 aa20.59■□□□□ 0.89
PTPRA-208ENST00000455631 C7orf72A4D263 438 aa20.59■□□□□ 0.89
PTPRA-208ENST00000455631 MYO1GB0I1T2 1018 aa20.59■□□□□ 0.89
PTPRA-208ENST00000455631 MANBAO00462 879 aa20.59■□□□□ 0.89
PTPRA-208ENST00000455631 ZSCAN12O43309 604 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms