RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 RNF144AP50876 292 aaPredicted RBP7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 ZNF41P51814 821 aaPredicted RBP7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 CLDN20P56880 219 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 RAE1P78406 368 aaKnown RBP7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 C2orf80Q0P641 193 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 LCP2Q13094 533 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 TMEM44Q2T9K0 475 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 SPDYAQ5MJ70 313 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 TCHHL1Q5QJ38 904 aaPredicted RBP7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 ZNF678Q5SXM1 525 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 TEX35Q5T0J7 233 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 ANKRD34AQ69YU3 496 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 HEPHL1Q6MZM0 1159 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 PPP4R4Q6NUP7 873 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 ADAM5Q6NVV9 412 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 TMEM107Q6UX40 140 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 STAC2Q6ZMT1 411 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 ESPNLQ6ZVH7 1005 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 MISPQ8IVT2 679 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 OR2L13Q8N349 312 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 OR4N2Q8NGD1 307 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 CEP70Q8NHQ1 597 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 ACTRT2Q8TDY3 377 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 IGFBPL1Q8WX77 278 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 CCDC126Q96EE4 140 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 PLPPR2Q96GM1 343 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 REXO5Q96IC2 774 aaKnown RBP7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 METTL2AQ96IZ6 378 aaKnown RBP7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 TMEM204Q9BSN7 226 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 LMF2Q9BU23 707 aaKnown RBP7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 ACTR6Q9GZN1 396 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 ESRP2Q9H6T0 727 aaKnown RBP7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 ANKRA2Q9H9E1 313 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 LRTM1Q9HBL6 345 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 MYNNQ9NPC7 610 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 DMGDHQ9UI17 866 aaKnown RBP7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 ZNF225Q9UK10 706 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 FBN3Q75N90 2809 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 COL6A5A8TX70 2615 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 ATRQ13535 2644 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 SONP18583 2426 aaKnown RBP7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 A0A087WUV0 522 aaPredicted RBP7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 ESYT3A0FGR9 886 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 ALG1L2C9J202 215 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 POC1B-GALNT4F8VUJ3 575 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 H0YC42 278 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 UPK1AO00322 258 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 PPP6CO00743 305 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 ADAMDEC1O15204 470 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 NDUFB5O43674 189 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 TLX2O43763 284 aaPredicted RBP7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 DLX3O60479 287 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 AQP8O94778 261 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 ANGPTL1O95841 491 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 AVPP01185 164 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 THBDP07204 575 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 HPGDP15428 266 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 DDX5P17844 614 aaKnown RBP7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 TSPAN8P19075 237 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 GABRA3P34903 492 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 RFX3P48380 749 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 PRKAA2P54646 552 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 TPD52P55327 224 aaPredicted RBP7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 ETF1P62495 437 aaKnown RBP7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 RAC1P63000 192 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 VEZF1Q14119 521 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 RNPS1Q15287 305 aaKnown RBP7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 TRADDQ15628 312 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 IMPG1Q17R60 797 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 CLEC12BQ2HXU8 276 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 UNC50Q53HI1 259 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 COX20Q5RI15 118 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 TMEM201Q5SNT2 666 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 PODNL1Q6PEZ8 512 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 RPS27LQ71UM5 84 aaKnown RBP7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 MARCH3Q86UD3 253 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 GGNQ86UU5 652 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 WFDC8Q8IUA0 241 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 GTPBP8Q8N3Z3 284 aaPredicted RBP7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 OR5M1Q8NGP8 315 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 OR10D3Q8NH80 312 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 OR2V1Q8NHB1 315 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 ZFP28Q8NHY6 868 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 CDC26Q8NHZ8 85 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 AKAP1Q92667 903 aaKnown RBP eCLIP7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 FBXW5Q969U6 566 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 ELP4Q96EB1 424 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 L3HYPDHQ96EM0 354 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 C11orf24Q96F05 449 aaPredicted RBP7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 APIPQ96GX9 242 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 AMDHD1Q96NU7 426 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 FMO2Q99518 471 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 EBPLQ9BY08 206 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 CDC42EP4Q9H3Q1 356 aaKnown RBP7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 BARX1Q9HBU1 254 aaPredicted RBP7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 GP6Q9HCN6 339 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 RNF115Q9Y4L5 304 aa7.18□□□□□ -1.26
NIF3L1-209ENST00000454952 VPS13CQ709C8 3753 aa7.17□□□□□ -1.26
NIF3L1-209ENST00000454952 EXOC1LA0A1B0GW35 172 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms