RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 MKLN1Q9UL63 735 aa25.47■■□□□ 1.67
SMARCC1-203ENST00000454240 MRPS18CQ9Y3D5 142 aaKnown RBP25.47■■□□□ 1.67
SMARCC1-203ENST00000454240 WDR45Q9Y484 360 aa25.47■■□□□ 1.67
SMARCC1-203ENST00000454240 HIVEP3Q5T1R4 2406 aa25.46■■□□□ 1.67
SMARCC1-203ENST00000454240 FBP2O00757 339 aa25.46■■□□□ 1.67
SMARCC1-203ENST00000454240 AQP7O14520 342 aa25.46■■□□□ 1.67
SMARCC1-203ENST00000454240 PTGS2P35354 604 aa25.46■■□□□ 1.67
SMARCC1-203ENST00000454240 FADDQ13158 208 aa25.46■■□□□ 1.67
SMARCC1-203ENST00000454240 MAPRE2Q15555 327 aa25.46■■□□□ 1.67
SMARCC1-203ENST00000454240 ZNF141Q15928 474 aa25.46■■□□□ 1.67
SMARCC1-203ENST00000454240 SYPL1Q16563 259 aa25.46■■□□□ 1.67
SMARCC1-203ENST00000454240 GPAT3Q53EU6 434 aa25.46■■□□□ 1.67
SMARCC1-203ENST00000454240 FRRS1Q6ZNA5 592 aa25.46■■□□□ 1.67
SMARCC1-203ENST00000454240 PIGWQ7Z7B1 504 aa25.46■■□□□ 1.67
SMARCC1-203ENST00000454240 MISPQ8IVT2 679 aa25.46■■□□□ 1.67
SMARCC1-203ENST00000454240 ANKFN1Q8N957 763 aa25.46■■□□□ 1.67
SMARCC1-203ENST00000454240 FAM83FQ8NEG4 500 aaPredicted RBP25.46■■□□□ 1.67
SMARCC1-203ENST00000454240 OR4K17Q8NGC6 315 aa25.46■■□□□ 1.67
SMARCC1-203ENST00000454240 NEIL3Q8TAT5 605 aa25.46■■□□□ 1.67
SMARCC1-203ENST00000454240 OR2B2Q9GZK3 357 aa25.46■■□□□ 1.67
SMARCC1-203ENST00000454240 SLC6A15Q9H2J7 730 aa25.46■■□□□ 1.67
SMARCC1-203ENST00000454240 THUMPD1Q9NXG2 353 aaKnown RBP25.46■■□□□ 1.67
SMARCC1-203ENST00000454240 ARMCX1Q9P291 453 aa25.46■■□□□ 1.67
SMARCC1-203ENST00000454240 KCNE5Q9UJ90 142 aa25.46■■□□□ 1.67
SMARCC1-203ENST00000454240 DTNAQ9Y4J8 743 aa25.46■■□□□ 1.67
SMARCC1-203ENST00000454240 CAPN7Q9Y6W3 813 aa25.46■■□□□ 1.67
SMARCC1-203ENST00000454240 TENM4Q6N022 2769 aa25.46■■□□□ 1.67
SMARCC1-203ENST00000454240 MYO18BQ8IUG5 2567 aa25.46■■□□□ 1.67
SMARCC1-203ENST00000454240 OR14I1A6ND48 311 aa25.45■■□□□ 1.66
SMARCC1-203ENST00000454240 KIAA0513O60268 411 aa25.45■■□□□ 1.66
SMARCC1-203ENST00000454240 H6PDO95479 791 aa25.45■■□□□ 1.66
SMARCC1-203ENST00000454240 BMP2P12643 396 aa25.45■■□□□ 1.66
SMARCC1-203ENST00000454240 ABOP16442 354 aa25.45■■□□□ 1.66
SMARCC1-203ENST00000454240 ENDOUP21128 410 aaKnown RBP25.45■■□□□ 1.66
SMARCC1-203ENST00000454240 PPIBP23284 216 aaKnown RBP25.45■■□□□ 1.66
SMARCC1-203ENST00000454240 SRD5A2P31213 254 aa25.45■■□□□ 1.66
SMARCC1-203ENST00000454240 DSTNP60981 165 aa25.45■■□□□ 1.66
SMARCC1-203ENST00000454240 TOMM20Q15388 145 aa25.45■■□□□ 1.66
SMARCC1-203ENST00000454240 MAPK11Q15759 364 aa25.45■■□□□ 1.66
SMARCC1-203ENST00000454240 CD226Q15762 336 aa25.45■■□□□ 1.66
SMARCC1-203ENST00000454240 EIPR1Q53HC9 387 aa25.45■■□□□ 1.66
SMARCC1-203ENST00000454240 RUNDC3AQ59EK9 446 aa25.45■■□□□ 1.66
SMARCC1-203ENST00000454240 MTERF4Q7Z6M4 381 aaKnown RBP25.45■■□□□ 1.66
SMARCC1-203ENST00000454240 DHDDSQ86SQ9 333 aa25.45■■□□□ 1.66
SMARCC1-203ENST00000454240 GATSQ8NAP1 163 aa25.45■■□□□ 1.66
SMARCC1-203ENST00000454240 DTNBP1Q96EV8 351 aa25.45■■□□□ 1.66
SMARCC1-203ENST00000454240 UGT2B17O75795 530 aa25.44■■□□□ 1.66
SMARCC1-203ENST00000454240 CHRM4P08173 479 aa25.44■■□□□ 1.66
SMARCC1-203ENST00000454240 DSCR4P56555 118 aaPredicted RBP25.44■■□□□ 1.66
SMARCC1-203ENST00000454240 CHRNEQ04844 493 aa25.44■■□□□ 1.66
SMARCC1-203ENST00000454240 COQ5Q5HYK3 327 aa25.44■■□□□ 1.66
SMARCC1-203ENST00000454240 WIPI1Q5MNZ9 446 aaPredicted RBP25.44■■□□□ 1.66
SMARCC1-203ENST00000454240 LRRC74BQ6ZQY2 392 aa25.44■■□□□ 1.66
SMARCC1-203ENST00000454240 YRDCQ86U90 279 aaKnown RBP25.44■■□□□ 1.66
SMARCC1-203ENST00000454240 MTDHQ86UE4 582 aaKnown RBP25.44■■□□□ 1.66
SMARCC1-203ENST00000454240 ZNF619Q8N2I2 560 aa25.44■■□□□ 1.66
SMARCC1-203ENST00000454240 FAM57AQ8TBR7 257 aa25.44■■□□□ 1.66
SMARCC1-203ENST00000454240 OIT3Q8WWZ8 545 aa25.44■■□□□ 1.66
SMARCC1-203ENST00000454240 CCDC106Q9BWC9 280 aa25.44■■□□□ 1.66
SMARCC1-203ENST00000454240 SLC38A1Q9H2H9 487 aa25.44■■□□□ 1.66
SMARCC1-203ENST00000454240 EXO5Q9H790 373 aa25.44■■□□□ 1.66
SMARCC1-203ENST00000454240 SPRR3Q9UBC9 169 aa25.44■■□□□ 1.66
SMARCC1-203ENST00000454240 P2RX2Q9UBL9 471 aa25.44■■□□□ 1.66
SMARCC1-203ENST00000454240 CLEC18AA5D8T8 446 aa25.43■■□□□ 1.66
SMARCC1-203ENST00000454240 ZIC3O60481 467 aa25.43■■□□□ 1.66
SMARCC1-203ENST00000454240 TNFRSF21O75509 655 aa25.43■■□□□ 1.66
SMARCC1-203ENST00000454240 TFPTP0C1Z6 253 aa25.43■■□□□ 1.66
SMARCC1-203ENST00000454240 NR2F1P10589 423 aa25.43■■□□□ 1.66
SMARCC1-203ENST00000454240 GPX2P18283 190 aa25.43■■□□□ 1.66
SMARCC1-203ENST00000454240 MSX1P28360 303 aa25.43■■□□□ 1.66
SMARCC1-203ENST00000454240 SRSF1Q07955 248 aaKnown RBP eCLIP25.43■■□□□ 1.66
SMARCC1-203ENST00000454240 PDZK1Q5T2W1 519 aa25.43■■□□□ 1.66
SMARCC1-203ENST00000454240 CLEC18BQ6UXF7 455 aa25.43■■□□□ 1.66
SMARCC1-203ENST00000454240 SNX32Q86XE0 403 aa25.43■■□□□ 1.66
SMARCC1-203ENST00000454240 CLEC18CQ8NCF0 446 aa25.43■■□□□ 1.66
SMARCC1-203ENST00000454240 ZG16BQ96DA0 208 aa25.43■■□□□ 1.66
SMARCC1-203ENST00000454240 ANKRD27Q96NW4 1050 aa25.43■■□□□ 1.66
SMARCC1-203ENST00000454240 CGREF1Q99674 301 aa25.43■■□□□ 1.66
SMARCC1-203ENST00000454240 CPPED1Q9BRF8 314 aaPredicted RBP25.43■■□□□ 1.66
SMARCC1-203ENST00000454240 IKZF5Q9H5V7 419 aa25.43■■□□□ 1.66
SMARCC1-203ENST00000454240 RUBCNLQ9H714 662 aa25.43■■□□□ 1.66
SMARCC1-203ENST00000454240 PTGES2Q9H7Z7 377 aa25.43■■□□□ 1.66
SMARCC1-203ENST00000454240 NIPSNAP3AQ9UFN0 247 aaPredicted RBP25.43■■□□□ 1.66
SMARCC1-203ENST00000454240 CENPVL1A0A0U1RR11 272 aa25.42■■□□□ 1.66
SMARCC1-203ENST00000454240 LOC100653049A0A140TA62 436 aa25.42■■□□□ 1.66
SMARCC1-203ENST00000454240 BBIP1A8MTZ0 92 aa25.42■■□□□ 1.66
SMARCC1-203ENST00000454240 KRT34O76011 436 aa25.42■■□□□ 1.66
SMARCC1-203ENST00000454240 DPP4P27487 766 aa25.42■■□□□ 1.66
SMARCC1-203ENST00000454240 CA7P43166 264 aa25.42■■□□□ 1.66
SMARCC1-203ENST00000454240 HPCAP84074 193 aa25.42■■□□□ 1.66
SMARCC1-203ENST00000454240 NFYCQ13952 458 aa25.42■■□□□ 1.66
SMARCC1-203ENST00000454240 GANABQ14697 944 aaKnown RBP25.42■■□□□ 1.66
SMARCC1-203ENST00000454240 MAPK14Q16539 360 aa25.42■■□□□ 1.66
SMARCC1-203ENST00000454240 C3AR1Q16581 482 aa25.42■■□□□ 1.66
SMARCC1-203ENST00000454240 C10orf111Q8N326 155 aa25.42■■□□□ 1.66
SMARCC1-203ENST00000454240 PHOSPHO1Q8TCT1 267 aa25.42■■□□□ 1.66
SMARCC1-203ENST00000454240 SLC38A5Q8WUX1 472 aa25.42■■□□□ 1.66
SMARCC1-203ENST00000454240 PMM1Q92871 262 aa25.42■■□□□ 1.66
SMARCC1-203ENST00000454240 RELTQ969Z4 430 aa25.42■■□□□ 1.66
SMARCC1-203ENST00000454240 MYLK2Q9H1R3 596 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms