RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 ESRRAP11474 423 aaPredicted RBP13.37□□□□□ -0.27
VPS16-205ENST00000453689 CYP4B1P13584 511 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 CALB2P22676 271 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 CRATP43155 626 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 MNAT1P51948 309 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 CASP9P55211 416 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 POU6F2P78424 691 aaPredicted RBP13.37□□□□□ -0.27
VPS16-205ENST00000453689 MRPS22P82650 360 aaKnown RBP13.37□□□□□ -0.27
VPS16-205ENST00000453689 RGNQ15493 299 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 DECR1Q16698 335 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 COX20Q5RI15 118 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.37□□□□□ -0.27
VPS16-205ENST00000453689 ATAD3BQ5T9A4 648 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 TIGD3Q6B0B8 471 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 ARPINQ7Z6K5 226 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 CD163Q86VB7 1156 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 OR8J3Q8NGG0 315 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 OR1J4Q8NGS1 313 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 PIK3R3Q92569 461 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 CDS1Q92903 461 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 CCDC120Q96HB5 630 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 GNRHR2Q96P88 292 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 SH3GL1Q99961 368 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 SLC39A3Q9BRY0 314 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 BTBD2Q9BX70 525 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 SLC6A15Q9H2J7 730 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 UBQLN3Q9H347 655 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 IKZF5Q9H5V7 419 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 LDAHQ9H6V9 325 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 EXD2Q9NVH0 621 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 MRTO4Q9UKD2 239 aaKnown RBP13.37□□□□□ -0.27
VPS16-205ENST00000453689 C15orf41Q9Y2V0 281 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 HRH3Q9Y5N1 445 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 KIAA1549Q9HCM3 1950 aa13.37□□□□□ -0.27
VPS16-205ENST00000453689 PTPN13Q12923 2485 aa13.36□□□□□ -0.27
VPS16-205ENST00000453689 TRGV5A0A0B4J1U4 118 aa13.36□□□□□ -0.27
VPS16-205ENST00000453689 NPIPA2E9PIF3 369 aa13.36□□□□□ -0.27
VPS16-205ENST00000453689 NPIPA3F8WFD2 350 aa13.36□□□□□ -0.27
VPS16-205ENST00000453689 HMGN4O00479 90 aa13.36□□□□□ -0.27
VPS16-205ENST00000453689 AQP7O14520 342 aa13.36□□□□□ -0.27
VPS16-205ENST00000453689 HCN1O60741 890 aa13.36□□□□□ -0.27
VPS16-205ENST00000453689 IL33O95760 270 aa13.36□□□□□ -0.27
VPS16-205ENST00000453689 OR12D1P0DN82 309 aa13.36□□□□□ -0.27
VPS16-205ENST00000453689 ETFAP13804 333 aa13.36□□□□□ -0.27
VPS16-205ENST00000453689 GPX2P18283 190 aa13.36□□□□□ -0.27
VPS16-205ENST00000453689 ENDOUP21128 410 aaKnown RBP13.36□□□□□ -0.27
VPS16-205ENST00000453689 ELAVL4P26378 380 aaKnown RBP13.36□□□□□ -0.27
VPS16-205ENST00000453689 PSMD4P55036 377 aaKnown RBP13.36□□□□□ -0.27
VPS16-205ENST00000453689 MTPNP58546 118 aa13.36□□□□□ -0.27
VPS16-205ENST00000453689 DSTNP60981 165 aa13.36□□□□□ -0.27
VPS16-205ENST00000453689 SELPLGQ14242 412 aa13.36□□□□□ -0.27
VPS16-205ENST00000453689 DCST2Q5T1A1 773 aa13.36□□□□□ -0.27
VPS16-205ENST00000453689 NANOGP8Q6NSW7 305 aa13.36□□□□□ -0.27
VPS16-205ENST00000453689 C3P1Q6ZMU1 363 aa13.36□□□□□ -0.27
VPS16-205ENST00000453689 XAGE5Q8WWM1 108 aa13.36□□□□□ -0.27
VPS16-205ENST00000453689 RMND5BQ96G75 393 aaPredicted RBP13.36□□□□□ -0.27
VPS16-205ENST00000453689 HOPXQ9BPY8 73 aaPredicted RBP13.36□□□□□ -0.27
VPS16-205ENST00000453689 GPATCH1Q9BRR8 931 aaKnown RBP13.36□□□□□ -0.27
VPS16-205ENST00000453689 EXO5Q9H790 373 aa13.36□□□□□ -0.27
VPS16-205ENST00000453689 NANOGQ9H9S0 305 aa13.36□□□□□ -0.27
VPS16-205ENST00000453689 ACKR4Q9NPB9 350 aa13.36□□□□□ -0.27
VPS16-205ENST00000453689 THUMPD1Q9NXG2 353 aaKnown RBP13.36□□□□□ -0.27
VPS16-205ENST00000453689 FLRT3Q9NZU0 649 aa13.36□□□□□ -0.27
VPS16-205ENST00000453689 SPRR3Q9UBC9 169 aa13.36□□□□□ -0.27
VPS16-205ENST00000453689 SUCOQ9UBS9 1254 aaKnown RBP13.36□□□□□ -0.27
VPS16-205ENST00000453689 MEMO1Q9Y316 297 aa13.36□□□□□ -0.27
VPS16-205ENST00000453689 WIF1Q9Y5W5 379 aa13.36□□□□□ -0.27
VPS16-205ENST00000453689 KCNE3Q9Y6H6 103 aa13.36□□□□□ -0.27
VPS16-205ENST00000453689 HCFC1P51610 2035 aa13.35□□□□□ -0.27
VPS16-205ENST00000453689 A1L4Q6 167 aa13.35□□□□□ -0.27
VPS16-205ENST00000453689 OR14I1A6ND48 311 aa13.35□□□□□ -0.27
VPS16-205ENST00000453689 ADAM10O14672 748 aa13.35□□□□□ -0.27
VPS16-205ENST00000453689 UBOX5O94941 541 aa13.35□□□□□ -0.27
VPS16-205ENST00000453689 KCNK2O95069 426 aa13.35□□□□□ -0.27
VPS16-205ENST00000453689 IGKV1D-16P01601 117 aa13.35□□□□□ -0.27
VPS16-205ENST00000453689 BMP2P12643 396 aa13.35□□□□□ -0.27
VPS16-205ENST00000453689 EVI2BP34910 448 aa13.35□□□□□ -0.27
VPS16-205ENST00000453689 RFX3P48380 749 aa13.35□□□□□ -0.27
VPS16-205ENST00000453689 GAS1P54826 345 aa13.35□□□□□ -0.27
VPS16-205ENST00000453689 ADORA2A-AS1P86434 159 aa13.35□□□□□ -0.27
VPS16-205ENST00000453689 TOMM20Q15388 145 aa13.35□□□□□ -0.27
VPS16-205ENST00000453689 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.35□□□□□ -0.27
VPS16-205ENST00000453689 EMC4Q5J8M3 183 aa13.35□□□□□ -0.27
VPS16-205ENST00000453689 GCNT6Q5T4J0 391 aa13.35□□□□□ -0.27
VPS16-205ENST00000453689 HEPHL1Q6MZM0 1159 aa13.35□□□□□ -0.27
VPS16-205ENST00000453689 C8orf82Q6P1X6 216 aaPredicted RBP13.35□□□□□ -0.27
VPS16-205ENST00000453689 MTFR2Q6P444 385 aa13.35□□□□□ -0.27
VPS16-205ENST00000453689 NCCRP1Q6ZVX7 275 aaPredicted RBP13.35□□□□□ -0.27
VPS16-205ENST00000453689 C16orf62Q7Z3J2 963 aa13.35□□□□□ -0.27
VPS16-205ENST00000453689 WDSUB1Q8N9V3 476 aa13.35□□□□□ -0.27
VPS16-205ENST00000453689 CHDHQ8NE62 594 aaPredicted RBP13.35□□□□□ -0.27
VPS16-205ENST00000453689 NEIL3Q8TAT5 605 aa13.35□□□□□ -0.27
VPS16-205ENST00000453689 FAM110BQ8TC76 370 aa13.35□□□□□ -0.27
VPS16-205ENST00000453689 RAB8BQ92930 207 aa13.35□□□□□ -0.27
VPS16-205ENST00000453689 DOCK7Q96N67 2140 aa13.35□□□□□ -0.27
VPS16-205ENST00000453689 G6PC3Q9BUM1 346 aa13.35□□□□□ -0.27
VPS16-205ENST00000453689 THUMPD3Q9BV44 507 aaKnown RBP13.35□□□□□ -0.27
VPS16-205ENST00000453689 TRIM8Q9BZR9 551 aa13.35□□□□□ -0.27
VPS16-205ENST00000453689 NDE1Q9NXR1 346 aa13.35□□□□□ -0.27
VPS16-205ENST00000453689 P2RX2Q9UBL9 471 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms