RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 UPK1AO00322 258 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 CLOCKO15516 846 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 PHF1O43189 567 aaPredicted RBP12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 GCM2O75603 506 aaPredicted RBP12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 UTS2O95399 124 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 IGHV4-39P01824 125 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 ENO1P06733 434 aaKnown RBP12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 IL32P24001 234 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 ELK4P28324 431 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 ACVR1BP36896 505 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 EIF1P41567 113 aaKnown RBP12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 ZNF41P51814 821 aaPredicted RBP12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 NCBP2P52298 156 aaKnown RBP eCLIP12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 RAE1P78406 368 aaKnown RBP12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 CLCQ05315 142 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 ZNF844Q08AG5 666 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 TMEM201Q5SNT2 666 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 SFRP5Q5T4F7 317 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 CPTPQ5TA50 214 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 LGSNQ5TDP6 509 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 ZDHHC24Q6UX98 284 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 GALNT10Q86SR1 603 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 TRABD2AQ86V40 505 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 LCA5Q86VQ0 697 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 FAM76AQ8TAV0 307 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 RAB3IL1Q8TBN0 382 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 RNF128Q8TEB7 428 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 CPNE4Q96A23 557 aaPredicted RBP12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 RADILQ96JH8 1075 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 RHNO1Q9BSD3 238 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 FUT8Q9BYC5 575 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 ACPTQ9BZG2 426 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 RTN4RQ9BZR6 473 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 IQCGQ9H095 443 aaKnown RBP12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 MIEF1Q9NQG6 463 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 KLHL13Q9P2N7 655 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 ZNF225Q9UK10 706 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 CR1P17927 2039 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 GJE1A6NN92 205 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 A8MT66 165 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 NDUFB5O43674 189 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 CXCL13O43927 109 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 OR4F21O95013 312 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 HSPA4LO95757 839 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 INHBAP08476 426 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 ANXA4P09525 319 aaPredicted RBP12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 CTAGE8P0CG41 777 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 PSMA4P25789 261 aaKnown RBP12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 HMOX2P30519 316 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 HSD17B3P37058 310 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 CDH13P55290 713 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 SLC29A2Q14542 456 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 C6orf52Q5T4I8 152 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 HBMQ6B0K9 141 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 FIGNL1Q6PIW4 674 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 TFAP2EQ6VUC0 442 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 GPRIN3Q6ZVF9 776 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 IKBIPQ70UQ0 350 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 RELL1Q8IUW5 271 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 CTAGE4Q8IX94 777 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 CNPY4Q8N129 248 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 MMGT1Q8N4V1 131 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 CDYL2Q8N8U2 506 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 MAPK1IP1LQ8NDC0 245 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 PIWIL2Q8TC59 973 aaKnown RBP12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 METTL6Q8TCB7 284 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 HOXB13Q92826 284 aaPredicted RBP12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 KISS1RQ969F8 398 aaPredicted RBP12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 ELP4Q96EB1 424 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 HBEGFQ99075 208 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 TRAF4Q9BUZ4 470 aaPredicted RBP12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 TRIM2Q9C040 744 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 TSPYL1Q9H0U9 437 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 CLEC4AQ9UMR7 237 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 VDAC3Q9Y277 283 aa12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 ANK3Q12955 4377 aaKnown RBP12.73□□□□□ -0.37
LYSMD3-202ENST00000453259 PPP6CO00743 305 aa12.72□□□□□ -0.37
LYSMD3-202ENST00000453259 NME6O75414 186 aaPredicted RBP12.72□□□□□ -0.37
LYSMD3-202ENST00000453259 JUNP05412 331 aaKnown RBP12.72□□□□□ -0.37
LYSMD3-202ENST00000453259 TAC1P20366 129 aa12.72□□□□□ -0.37
LYSMD3-202ENST00000453259 CDKN1AP38936 164 aa12.72□□□□□ -0.37
LYSMD3-202ENST00000453259 PKNOX1P55347 436 aa12.72□□□□□ -0.37
LYSMD3-202ENST00000453259 CARD18P57730 90 aa12.72□□□□□ -0.37
LYSMD3-202ENST00000453259 MRPS25P82663 173 aaKnown RBP12.72□□□□□ -0.37
LYSMD3-202ENST00000453259 ITGADQ13349 1161 aa12.72□□□□□ -0.37
LYSMD3-202ENST00000453259 TAB1Q15750 504 aa12.72□□□□□ -0.37
LYSMD3-202ENST00000453259 ZNF239Q16600 458 aaKnown RBP12.72□□□□□ -0.37
LYSMD3-202ENST00000453259 PGGHGQ32M88 737 aa12.72□□□□□ -0.37
LYSMD3-202ENST00000453259 PLPPR5Q32ZL2 321 aa12.72□□□□□ -0.37
LYSMD3-202ENST00000453259 TMEM107Q6UX40 140 aa12.72□□□□□ -0.37
LYSMD3-202ENST00000453259 P2RY8Q86VZ1 359 aa12.72□□□□□ -0.37
LYSMD3-202ENST00000453259 SLC43A2Q8N370 569 aa12.72□□□□□ -0.37
LYSMD3-202ENST00000453259 MRRFQ96E11 262 aaKnown RBP12.72□□□□□ -0.37
LYSMD3-202ENST00000453259 ZNF764Q96H86 408 aaPredicted RBP12.72□□□□□ -0.37
LYSMD3-202ENST00000453259 METTL2AQ96IZ6 378 aaKnown RBP12.72□□□□□ -0.37
LYSMD3-202ENST00000453259 ADAD1Q96M93 576 aaKnown RBP12.72□□□□□ -0.37
LYSMD3-202ENST00000453259 KLHL15Q96M94 604 aa12.72□□□□□ -0.37
LYSMD3-202ENST00000453259 AMDHD1Q96NU7 426 aa12.72□□□□□ -0.37
LYSMD3-202ENST00000453259 MYNNQ9NPC7 610 aa12.72□□□□□ -0.37
LYSMD3-202ENST00000453259 FBXO34Q9NWN3 711 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms