RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 EFNA1P20827 205 aaPredicted RBP25.39■■□□□ 1.66
CBX4-202ENST00000448310 ADSLP30566 484 aaPredicted RBP25.39■■□□□ 1.66
CBX4-202ENST00000448310 RPL38P63173 70 aaKnown RBP25.39■■□□□ 1.66
CBX4-202ENST00000448310 LTBQ06643 244 aa25.39■■□□□ 1.66
CBX4-202ENST00000448310 EXOC3L2Q2M3D2 409 aa25.39■■□□□ 1.66
CBX4-202ENST00000448310 SHEQ5VZ18 495 aa25.39■■□□□ 1.66
CBX4-202ENST00000448310 FAM214BQ7L5A3 538 aa25.39■■□□□ 1.66
CBX4-202ENST00000448310 C10orf107Q8IVU9 208 aa25.39■■□□□ 1.66
CBX4-202ENST00000448310 CDRT4Q8N9R6 151 aa25.39■■□□□ 1.66
CBX4-202ENST00000448310 ZFP28Q8NHY6 868 aa25.39■■□□□ 1.66
CBX4-202ENST00000448310 FCRL1Q96LA6 429 aa25.39■■□□□ 1.66
CBX4-202ENST00000448310 CCT7Q99832 543 aa25.39■■□□□ 1.66
CBX4-202ENST00000448310 PRRG4Q9BZD6 226 aa25.39■■□□□ 1.66
CBX4-202ENST00000448310 KLHL4Q9C0H6 718 aa25.39■■□□□ 1.66
CBX4-202ENST00000448310 NSD1Q96L73 2696 aaPredicted RBP25.39■■□□□ 1.65
CBX4-202ENST00000448310 ALG1L2C9J202 215 aa25.38■■□□□ 1.65
CBX4-202ENST00000448310 NDUFB5O43674 189 aa25.38■■□□□ 1.65
CBX4-202ENST00000448310 LINC00032P0C843 101 aa25.38■■□□□ 1.65
CBX4-202ENST00000448310 MANFP55145 182 aaKnown RBP25.38■■□□□ 1.65
CBX4-202ENST00000448310 FGFBP1Q14512 234 aa25.38■■□□□ 1.65
CBX4-202ENST00000448310 VPS26BQ4G0F5 336 aa25.38■■□□□ 1.65
CBX4-202ENST00000448310 RFTN2Q52LD8 501 aaPredicted RBP25.38■■□□□ 1.65
CBX4-202ENST00000448310 Q5PR19 223 aa25.38■■□□□ 1.65
CBX4-202ENST00000448310 SLC16A11Q8NCK7 471 aa25.38■■□□□ 1.65
CBX4-202ENST00000448310 CEP70Q8NHQ1 597 aa25.38■■□□□ 1.65
CBX4-202ENST00000448310 ZBED6CLQ96FA7 236 aaPredicted RBP25.38■■□□□ 1.65
CBX4-202ENST00000448310 ZNF764Q96H86 408 aaPredicted RBP25.38■■□□□ 1.65
CBX4-202ENST00000448310 GATA5Q9BWX5 397 aaPredicted RBP25.38■■□□□ 1.65
CBX4-202ENST00000448310 FBXO34Q9NWN3 711 aa25.38■■□□□ 1.65
CBX4-202ENST00000448310 SMPD2O60906 423 aa25.37■■□□□ 1.65
CBX4-202ENST00000448310 FCGR2AP12318 317 aa25.37■■□□□ 1.65
CBX4-202ENST00000448310 KRT4P19013 534 aa25.37■■□□□ 1.65
CBX4-202ENST00000448310 PCLAFQ15004 111 aa25.37■■□□□ 1.65
CBX4-202ENST00000448310 DUSP5Q16690 384 aa25.37■■□□□ 1.65
CBX4-202ENST00000448310 TDRPQ86YL5 185 aa25.37■■□□□ 1.65
CBX4-202ENST00000448310 P3H2Q8IVL5 708 aa25.37■■□□□ 1.65
CBX4-202ENST00000448310 C16orf58Q96GQ5 468 aa25.37■■□□□ 1.65
CBX4-202ENST00000448310 MARK4Q96L34 752 aa25.37■■□□□ 1.65
CBX4-202ENST00000448310 MS4A4EQ96PG1 132 aa25.37■■□□□ 1.65
CBX4-202ENST00000448310 KLHDC3Q9BQ90 382 aa25.37■■□□□ 1.65
CBX4-202ENST00000448310 PRR14LQ5THK1 2151 aa25.37■■□□□ 1.65
CBX4-202ENST00000448310 TBX19O60806 448 aa25.36■■□□□ 1.65
CBX4-202ENST00000448310 KCNK2O95069 426 aa25.36■■□□□ 1.65
CBX4-202ENST00000448310 ZNF17P17021 662 aa25.36■■□□□ 1.65
CBX4-202ENST00000448310 TBXA2RP21731 343 aa25.36■■□□□ 1.65
CBX4-202ENST00000448310 FRKP42685 505 aaPredicted RBP25.36■■□□□ 1.65
CBX4-202ENST00000448310 OCRLQ01968 901 aa25.36■■□□□ 1.65
CBX4-202ENST00000448310 SLC18A2Q05940 514 aa25.36■■□□□ 1.65
CBX4-202ENST00000448310 PDE7AQ13946 482 aa25.36■■□□□ 1.65
CBX4-202ENST00000448310 ACKR1Q16570 336 aa25.36■■□□□ 1.65
CBX4-202ENST00000448310 GALNTL6Q49A17 601 aa25.36■■□□□ 1.65
CBX4-202ENST00000448310 OR10D3Q8NH80 312 aa25.36■■□□□ 1.65
CBX4-202ENST00000448310 PIGTQ969N2 578 aa25.36■■□□□ 1.65
CBX4-202ENST00000448310 SH3YL1Q96HL8 342 aaPredicted RBP25.36■■□□□ 1.65
CBX4-202ENST00000448310 CCL19Q99731 98 aa25.36■■□□□ 1.65
CBX4-202ENST00000448310 ZNF395Q9H8N7 513 aaPredicted RBP25.36■■□□□ 1.65
CBX4-202ENST00000448310 NTMQ9P121 344 aa25.36■■□□□ 1.65
CBX4-202ENST00000448310 NUP214P35658 2090 aaPredicted RBP25.35■■□□□ 1.65
CBX4-202ENST00000448310 UQCRHLA0A096LP55 91 aa25.35■■□□□ 1.65
CBX4-202ENST00000448310 ARHGEF9O43307 516 aa25.35■■□□□ 1.65
CBX4-202ENST00000448310 NEFHP12036 1026 aa25.35■■□□□ 1.65
CBX4-202ENST00000448310 LOXP28300 417 aaPredicted RBP25.35■■□□□ 1.65
CBX4-202ENST00000448310 CPEB4Q17RY0 729 aaKnown RBP eCLIP25.35■■□□□ 1.65
CBX4-202ENST00000448310 CTU2Q2VPK5 515 aaKnown RBP25.35■■□□□ 1.65
CBX4-202ENST00000448310 CCNJQ5T5M9 372 aa25.35■■□□□ 1.65
CBX4-202ENST00000448310 KANK2Q63ZY3 851 aa25.35■■□□□ 1.65
CBX4-202ENST00000448310 MFSD12Q6NUT3 480 aa25.35■■□□□ 1.65
CBX4-202ENST00000448310 CLEC9AQ6UXN8 241 aa25.35■■□□□ 1.65
CBX4-202ENST00000448310 WDR75Q8IWA0 830 aaKnown RBP25.35■■□□□ 1.65
CBX4-202ENST00000448310 FAM110BQ8TC76 370 aa25.35■■□□□ 1.65
CBX4-202ENST00000448310 ADGRG7Q96K78 797 aa25.35■■□□□ 1.65
CBX4-202ENST00000448310 RNF145Q96MT1 663 aa25.35■■□□□ 1.65
CBX4-202ENST00000448310 PIP5K1AQ99755 562 aa25.35■■□□□ 1.65
CBX4-202ENST00000448310 IQCGQ9H095 443 aaKnown RBP25.35■■□□□ 1.65
CBX4-202ENST00000448310 TMEM185BQ9H7F4 350 aa25.35■■□□□ 1.65
CBX4-202ENST00000448310 EMC9Q9Y3B6 208 aa25.35■■□□□ 1.65
CBX4-202ENST00000448310 DNAJC15Q9Y5T4 150 aa25.35■■□□□ 1.65
CBX4-202ENST00000448310 A0A087WZY1 265 aa25.34■■□□□ 1.65
CBX4-202ENST00000448310 A0A1W2PRB8 838 aa25.34■■□□□ 1.65
CBX4-202ENST00000448310 TMEM233B4DJY2 109 aa25.34■■□□□ 1.65
CBX4-202ENST00000448310 LSM1O15116 133 aaKnown RBP25.34■■□□□ 1.65
CBX4-202ENST00000448310 CXCL13O43927 109 aa25.34■■□□□ 1.65
CBX4-202ENST00000448310 PLGP00747 810 aaPredicted RBP25.34■■□□□ 1.65
CBX4-202ENST00000448310 NGFRP08138 427 aa25.34■■□□□ 1.65
CBX4-202ENST00000448310 PLPPR5Q32ZL2 321 aa25.34■■□□□ 1.65
CBX4-202ENST00000448310 GTPBP8Q8N3Z3 284 aaPredicted RBP25.34■■□□□ 1.65
CBX4-202ENST00000448310 JADE3Q92613 823 aa25.34■■□□□ 1.65
CBX4-202ENST00000448310 ACSS1Q9NUB1 689 aaPredicted RBP25.34■■□□□ 1.65
CBX4-202ENST00000448310 MED17Q9NVC6 651 aa25.34■■□□□ 1.65
CBX4-202ENST00000448310 STOML1Q9UBI4 398 aa25.34■■□□□ 1.65
CBX4-202ENST00000448310 GIMAP2Q9UG22 337 aa25.34■■□□□ 1.65
CBX4-202ENST00000448310 TNFSF11O14788 317 aa25.33■■□□□ 1.65
CBX4-202ENST00000448310 THBDP07204 575 aa25.33■■□□□ 1.65
CBX4-202ENST00000448310 CHRNGP07510 517 aa25.33■■□□□ 1.65
CBX4-202ENST00000448310 ALOX5P09917 674 aa25.33■■□□□ 1.65
CBX4-202ENST00000448310 PSMA4P25789 261 aaKnown RBP25.33■■□□□ 1.65
CBX4-202ENST00000448310 CTBP2P56545 445 aa25.33■■□□□ 1.65
CBX4-202ENST00000448310 RNF165Q6ZSG1 346 aa25.33■■□□□ 1.65
CBX4-202ENST00000448310 DDIASQ8IXT1 998 aa25.33■■□□□ 1.65
CBX4-202ENST00000448310 LRRC75A-AS1Q8N1F1 130 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms