RNA–Protein interactions for RNA: ENST00000445692.5

APLF-203, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 3,906 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-203ENST00000445692 A0A1W2PPL8 197 aa11.32□□□□□ -0.6
APLF-203ENST00000445692 GTPBP1O00178 669 aaKnown RBP11.32□□□□□ -0.6
APLF-203ENST00000445692 CDK2AP1O14519 115 aa11.32□□□□□ -0.6
APLF-203ENST00000445692 ZNF3P17036 446 aa11.32□□□□□ -0.6
APLF-203ENST00000445692 AHCYP23526 432 aa11.32□□□□□ -0.6
APLF-203ENST00000445692 GABRA5P31644 462 aa11.32□□□□□ -0.6
APLF-203ENST00000445692 RAB40BQ12829 278 aa11.32□□□□□ -0.6
APLF-203ENST00000445692 EIF2B5Q13144 721 aaKnown RBP11.32□□□□□ -0.6
APLF-203ENST00000445692 EXOSC2Q13868 293 aaKnown RBP11.32□□□□□ -0.6
APLF-203ENST00000445692 OTPQ5XKR4 325 aa11.32□□□□□ -0.6
APLF-203ENST00000445692 HAGHLQ6PII5 290 aaPredicted RBP11.32□□□□□ -0.6
APLF-203ENST00000445692 C17orf107Q6ZR85 190 aa11.32□□□□□ -0.6
APLF-203ENST00000445692 CREB3L2Q70SY1 520 aa11.32□□□□□ -0.6
APLF-203ENST00000445692 PRSS58Q8IYP2 241 aa11.32□□□□□ -0.6
APLF-203ENST00000445692 MSLNLQ96KJ4 702 aa11.32□□□□□ -0.6
APLF-203ENST00000445692 MIXL1Q9H2W2 232 aa11.32□□□□□ -0.6
APLF-203ENST00000445692 NIPAL2Q9H841 368 aa11.32□□□□□ -0.6
APLF-203ENST00000445692 SRA1Q9HD15 236 aaKnown RBP11.32□□□□□ -0.6
APLF-203ENST00000445692 NOP16Q9Y3C1 178 aaKnown RBP11.32□□□□□ -0.6
APLF-203ENST00000445692 CDH10Q9Y6N8 788 aa11.32□□□□□ -0.6
APLF-203ENST00000445692 AP3S2P59780 193 aa11.32□□□□□ -0.6
APLF-203ENST00000445692 SQSTM1Q13501 440 aa11.32□□□□□ -0.6
APLF-203ENST00000445692 LTB4RQ15722 352 aa11.32□□□□□ -0.6
APLF-203ENST00000445692 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.32□□□□□ -0.6
APLF-203ENST00000445692 KREMEN2Q8NCW0 462 aa11.32□□□□□ -0.6
APLF-203ENST00000445692 THEM6Q8WUY1 208 aa11.32□□□□□ -0.6
APLF-203ENST00000445692 CXorf40BQ96DE9 158 aa11.32□□□□□ -0.6
APLF-203ENST00000445692 SLC41A3Q96GZ6 507 aa11.32□□□□□ -0.6
APLF-203ENST00000445692 ZSWIM3Q96MP5 696 aa11.32□□□□□ -0.6
APLF-203ENST00000445692 OR2S2Q9NQN1 319 aa11.32□□□□□ -0.6
APLF-203ENST00000445692 AKAP7Q9P0M2 348 aaPredicted RBP11.32□□□□□ -0.6
APLF-203ENST00000445692 TAAR2Q9P1P5 351 aa11.32□□□□□ -0.6
APLF-203ENST00000445692 FBXL2Q9UKC9 423 aa11.32□□□□□ -0.6
APLF-203ENST00000445692 A0A087WUU8 490 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 C5orf51A6NDU8 294 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 OR2AT4A6NND4 320 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 ARL6IP5O75915 188 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 AK4P27144 223 aaPredicted RBP11.31□□□□□ -0.6
APLF-203ENST00000445692 CERS1P27544 350 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 ZCCHC12Q6PEW1 402 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 APOOLQ6UXV4 268 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 TAF8Q7Z7C8 310 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 CHCHD4Q8N4Q1 142 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 CHTF18Q8WVB6 975 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 LCN9Q8WX39 176 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 UCN3Q969E3 161 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 MRPL48Q96GC5 212 aaKnown RBP11.31□□□□□ -0.6
APLF-203ENST00000445692 PPP1R16AQ96I34 528 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 NDUFB11Q9NX14 153 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 NDOR1Q9UHB4 597 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 SLC16A5O15375 505 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 SLC43A1O75387 559 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 C1orf105O95561 183 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 GTF2F2P13984 249 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 NPPBP16860 134 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 DDX6P26196 483 aaKnown RBP eCLIP11.31□□□□□ -0.6
APLF-203ENST00000445692 PUM1Q14671 1186 aaKnown RBP eCLIP11.31□□□□□ -0.6
APLF-203ENST00000445692 OPCMLQ14982 345 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 YIF1BQ5BJH7 314 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 TCTE1Q5JU00 501 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 PYHIN1Q6K0P9 492 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 SLC9B2Q86UD5 537 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 TMEM255BQ8WV15 326 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 NKX3-1Q99801 234 aaPredicted RBP11.31□□□□□ -0.6
APLF-203ENST00000445692 TM7SF3Q9NS93 570 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 DIMT1Q9UNQ2 313 aaKnown RBP11.31□□□□□ -0.6
APLF-203ENST00000445692 MED31Q9Y3C7 131 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 SCN4AP35499 1836 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 FAM186AA6NE01 2351 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 TBC1D3DA0A087WVF3 549 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 TBC1D3IA0A087WXS9 549 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 TBC1D3EA0A087X179 549 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 TBC1D3KA0A087X1G2 549 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 TBC1D3FA6NER0 549 aaPredicted RBP11.31□□□□□ -0.6
APLF-203ENST00000445692 TBC1D3LB9A6J9 549 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 H0YIV9 168 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 K7ESM1 405 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 GOSR2O14653 212 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 DOK2O60496 412 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 EIF4EP06730 217 aaKnown RBP11.31□□□□□ -0.6
APLF-203ENST00000445692 ASGR2P07307 311 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 TBC1D3HP0C7X1 549 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 FAUP35544 74 aaKnown RBP11.31□□□□□ -0.6
APLF-203ENST00000445692 EPHA5P54756 1037 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 KCNC3Q14003 757 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 TBC1D3GQ6DHY5 549 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 TBC1D3CQ6IPX1 549 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 FAM198BQ6UWH4 519 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 GPR155Q7Z3F1 870 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 PAQR7Q86WK9 346 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 TBC1D3Q8IZP1 549 aaPredicted RBP11.31□□□□□ -0.6
APLF-203ENST00000445692 ARL14Q8N4G2 192 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 UBTD2Q8WUN7 234 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 ADAD1Q96M93 576 aaKnown RBP11.31□□□□□ -0.6
APLF-203ENST00000445692 DEFB118Q96PH6 123 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 LMF1Q96S06 567 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 CLSTN3Q9BQT9 956 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 TMEM43Q9BTV4 400 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 ACOXLQ9NUZ1 547 aa11.31□□□□□ -0.6
APLF-203ENST00000445692 BABAM2Q9NXR7 383 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms