RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 A0A1W2PP18 115 aa13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 FIGNL2A6NMB9 653 aa13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 H3BNH8 94 aa13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 HMGN4O00479 90 aa13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 NR5A2O00482 541 aa13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 WDR1O75083 606 aa13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 ACTL6AO96019 429 aa13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 ESRRAP11474 423 aaPredicted RBP13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 GABRA1P14867 456 aa13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 DPP4P27487 766 aa13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 CRYZQ08257 329 aaKnown RBP13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 GLYR1Q49A26 553 aaPredicted RBP13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 KLHL26Q53HC5 615 aa13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 EIPR1Q53HC9 387 aa13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 EMC4Q5J8M3 183 aa13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 WIPI1Q5MNZ9 446 aaPredicted RBP13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 VASNQ6EMK4 673 aa13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 OR5M10Q6IEU7 315 aa13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 PM20D2Q8IYS1 436 aa13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 OR14L1PQ8NHC6 308 aa13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 PMM1Q92871 262 aa13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 ROPN1LQ96C74 230 aa13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 PAIP1Q9H074 479 aaKnown RBP13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 SAP130Q9H0E3 1048 aa13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 DSN1Q9H410 356 aa13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 RAD21L1Q9H4I0 556 aa13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 SLC6A13Q9NSD5 602 aa13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 SPRR3Q9UBC9 169 aa13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 DKKL1Q9UK85 242 aa13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 PCDHB14Q9Y5E9 798 aa13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 HRH3Q9Y5N1 445 aa13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 GMEB1Q9Y692 573 aa13.67□□□□□ -0.22
CSNK1E-210ENST00000442216 DOPEY2Q9Y3R5 2298 aa13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 C15orf38-AP3S2A0A0A6YYH1 394 aa13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 B4DXG7 233 aa13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 LINC01387J3KSC0 135 aa13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 ZNHIT1O43257 154 aa13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 ZIC3O60481 467 aa13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 HOXB9P17482 250 aaPredicted RBP13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 CAPN3P20807 821 aa13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 PPIBP23284 216 aaKnown RBP13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 CHMP24386 653 aa13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 ADSLP30566 484 aaPredicted RBP13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 PTGER4P35408 488 aa13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 MVDP53602 400 aa13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 CASP9P55211 416 aa13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 FADDQ13158 208 aa13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 STX5Q13190 355 aa13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 SF3B4Q15427 424 aaKnown RBP eCLIP13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 ZNF141Q15928 474 aa13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 ZNF630Q2M218 657 aaPredicted RBP13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 TMEM211Q6ICI0 200 aa13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 SLC2A7Q6PXP3 512 aa13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 RPTNQ6XPR3 784 aa13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 DNAJC14Q6Y2X3 702 aaPredicted RBP13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 IFNEQ86WN2 208 aa13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 RAB8BQ92930 207 aa13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 ABTB1Q969K4 478 aaPredicted RBP13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 TRNT1Q96Q11 434 aaKnown RBP13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 DMRTA2Q96SC8 542 aa13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 TIMP4Q99727 224 aa13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 PRDM14Q9GZV8 571 aa13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 TAS2R10Q9NYW0 307 aa13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 MED11Q9P086 117 aa13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 SH3BGRL2Q9UJC5 107 aa13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 LEF1Q9UJU2 399 aaPredicted RBP13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 DTNAQ9Y4J8 743 aa13.66□□□□□ -0.22
CSNK1E-210ENST00000442216 PCNX1Q96RV3 2341 aa13.65□□□□□ -0.22
CSNK1E-210ENST00000442216 A0A087WZY1 265 aa13.65□□□□□ -0.22
CSNK1E-210ENST00000442216 AHRRA9YTQ3 701 aa13.65□□□□□ -0.22
CSNK1E-210ENST00000442216 CLIC1O00299 241 aa13.65□□□□□ -0.22
CSNK1E-210ENST00000442216 KIAA0513O60268 411 aa13.65□□□□□ -0.22
CSNK1E-210ENST00000442216 FCMRO60667 390 aa13.65□□□□□ -0.22
CSNK1E-210ENST00000442216 BMP7P18075 431 aa13.65□□□□□ -0.22
CSNK1E-210ENST00000442216 AGAP20933 346 aa13.65□□□□□ -0.22
CSNK1E-210ENST00000442216 ADH7P40394 386 aa13.65□□□□□ -0.22
CSNK1E-210ENST00000442216 GFRA1P56159 465 aa13.65□□□□□ -0.22
CSNK1E-210ENST00000442216 HPCAP84074 193 aa13.65□□□□□ -0.22
CSNK1E-210ENST00000442216 FUT5Q11128 374 aa13.65□□□□□ -0.22
CSNK1E-210ENST00000442216 TYW3Q6IPR3 259 aaKnown RBP13.65□□□□□ -0.22
CSNK1E-210ENST00000442216 AAGABQ6PD74 315 aa13.65□□□□□ -0.22
CSNK1E-210ENST00000442216 ENPP6Q6UWR7 440 aa13.65□□□□□ -0.22
CSNK1E-210ENST00000442216 LRRC74BQ6ZQY2 392 aa13.65□□□□□ -0.22
CSNK1E-210ENST00000442216 YRDCQ86U90 279 aaKnown RBP13.65□□□□□ -0.22
CSNK1E-210ENST00000442216 ZNF619Q8N2I2 560 aa13.65□□□□□ -0.22
CSNK1E-210ENST00000442216 DPP10Q8N608 796 aa13.65□□□□□ -0.22
CSNK1E-210ENST00000442216 C10orf82Q8WW14 230 aa13.65□□□□□ -0.22
CSNK1E-210ENST00000442216 C1GALT1C1Q96EU7 318 aa13.65□□□□□ -0.22
CSNK1E-210ENST00000442216 CCDC120Q96HB5 630 aa13.65□□□□□ -0.22
CSNK1E-210ENST00000442216 UGT2B28Q9BY64 529 aa13.65□□□□□ -0.22
CSNK1E-210ENST00000442216 PNPLA3Q9NST1 481 aa13.65□□□□□ -0.22
CSNK1E-210ENST00000442216 SLC6A5Q9Y345 797 aa13.65□□□□□ -0.22
CSNK1E-210ENST00000442216 NDUFAF1Q9Y375 327 aa13.65□□□□□ -0.22
CSNK1E-210ENST00000442216 WDR45Q9Y484 360 aa13.65□□□□□ -0.22
CSNK1E-210ENST00000442216 RELNP78509 3460 aa13.64□□□□□ -0.23
CSNK1E-210ENST00000442216 USP9XQ93008 2570 aaPredicted RBP13.64□□□□□ -0.23
CSNK1E-210ENST00000442216 MED12Q93074 2177 aa13.64□□□□□ -0.23
CSNK1E-210ENST00000442216 C17orf51A8MQB3 221 aa13.64□□□□□ -0.23
CSNK1E-210ENST00000442216 EIF4E2O60573 245 aaKnown RBP13.64□□□□□ -0.23
CSNK1E-210ENST00000442216 UGT2B17O75795 530 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms