RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 SLC15A4Q8N697 577 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 OR2L8Q8NGY9 312 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 CNIH3Q8TBE1 160 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 SETD6Q8TBK2 473 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 RERGQ96A58 199 aaPredicted RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 TAMM41Q96BW9 452 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 LGALS12Q96DT0 336 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 ABHD17AQ96GS6 310 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 ZNF354BQ96LW1 612 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 FUZQ9BT04 418 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 CCDC32Q9BV29 185 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 ROGDIQ9GZN7 287 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 SLIRPQ9GZT3 109 aaKnown RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 NAA50Q9GZZ1 169 aaKnown RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 SLC25A19Q9HC21 320 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 SEMA3GQ9NS98 782 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 ACER3Q9NUN7 267 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 GPATCH2Q9NW75 528 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 SIDT1Q9NXL6 827 aaKnown RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 NPAP1Q9NZP6 1156 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 SH3BP4Q9P0V3 963 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 CRNNQ9UBG3 495 aaPredicted RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 GPN3Q9UHW5 284 aaPredicted RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 UTS2RQ9UKP6 389 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 TMCC3Q9ULS5 477 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 STUB1Q9UNE7 303 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 TRAPPC4Q9Y296 219 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 POLQO75417 2590 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 A0A1W2PPV9 198 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 A0A1W2PRQ8 180 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 FUOMA2VDF0 154 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 METTL15A6NJ78 407 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 EFCAB9A8MZ26 197 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 LOC110117498-PIK3R3F6TDL0 507 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 hCG_2039718K7EN88 272 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 RTCAO00442 366 aaKnown RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 KLHL18O94889 574 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 C6orf47O95873 294 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 CELA2AP08217 269 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 TFPTP0C1Z6 253 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 CD36P16671 472 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 GALP22466 123 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 PRKACGP22612 351 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 PTBP1P26599 531 aaKnown RBP eCLIP4.43□□□□□ -1.76e-8■■■■■ 27.1
EDEM3-203ENST00000439962 CMPK1P30085 196 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 PPP2R1BP30154 601 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 PTGER1P34995 402 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 SOX6P35712 828 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 IFNGR2P38484 337 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 OPRL1P41146 370 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 CRATP43155 626 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 CAPZA2P47755 286 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 KCNJ5P48544 419 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 PSMD7P51665 324 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 CRISP1P54107 249 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 SPIBQ01892 262 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 ID2Q02363 134 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 TGM3Q08188 693 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 RIPPLY1Q0D2K3 151 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 DGCR6Q14129 220 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 ZNF404Q494X3 552 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 ZNF385BQ569K4 471 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 LINC00696Q6ZRV3 163 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 VTCN1Q7Z7D3 282 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 MRGPREQ86SM8 312 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 DTX1Q86Y01 620 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 D2HGDHQ8N465 521 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 CSNK1A1LQ8N752 337 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 OR56A1Q8NGH5 318 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 SPPL2AQ8TCT8 520 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 PIK3R3Q92569 461 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 PROX1Q92786 737 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 EFHD2Q96C19 240 aaPredicted RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 ZHX1-C8orf76Q96EF9 292 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 HSPBAP1Q96EW2 488 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 TPD52L3Q96J77 140 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 SLC41A2Q96JW4 573 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 ALPK1Q96QP1 1244 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 FEVQ99581 238 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 COQ7Q99807 217 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 MENTQ9BUN1 341 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 JAM3Q9BX67 310 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 ZNF717Q9BY31 904 aaPredicted RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 CUTCQ9NTM9 273 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 TMEM184CQ9NVA4 438 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 LYARQ9NX58 379 aaKnown RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 IMPAD1Q9NX62 359 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 NTMQ9P121 344 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 P2RX2Q9UBL9 471 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 ERVK-11Q9UQG0 969 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 LIPT1Q9Y234 373 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 RPL36Q9Y3U8 105 aaKnown RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 GPC6Q9Y625 555 aaPredicted RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 DOCK10Q96BY6 2186 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 PKDREJQ9NTG1 2253 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 A0A0G2JPF8 293 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 HYKKA2RU49 373 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 SLC35F4A4IF30 521 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 HNRNPCL2B2RXH8 293 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms