RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 AMDHD1Q96NU7 426 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 HOXD1Q9GZZ0 328 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 MKRN2Q9H000 416 aaKnown RBP6.28□□□□□ -1.4
CSDE1-205ENST00000438362 NIPAL2Q9H841 368 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 SLC52A3Q9NQ40 469 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 HRASLS2Q9NWW9 162 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 SDK1Q7Z5N4 2213 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 TMEM129A0AVI4 362 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 SYT5O00445 386 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 UCHL1P09936 223 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 GIMD1P0DJR0 217 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 HOXB2P14652 356 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 ARSBP15848 533 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 FAPQ12884 760 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 FXNQ16595 210 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 PUS10Q3MIT2 529 aaKnown RBP6.27□□□□□ -1.41
CSDE1-205ENST00000438362 TP53I3Q53FA7 332 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 FAM205BPQ63HN1 556 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 KIAA1211LQ6NV74 962 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 PAQR6Q6TCH4 344 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 QSOX2Q6ZRP7 698 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 OLIG3Q7RTU3 272 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 KIF18BQ86Y91 864 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 OR6N2Q8NGY6 317 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 TM9SF4Q92544 642 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 CDS1Q92903 461 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 SMARCD2Q92925 531 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 ZMYND19Q96E35 227 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-205ENST00000438362 FYTTD1Q96QD9 318 aaKnown RBP6.27□□□□□ -1.41
CSDE1-205ENST00000438362 GPER1Q99527 375 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 SLC38A3Q99624 504 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 RAD9AQ99638 391 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 RBCK1Q9BYM8 510 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 OR10A4Q9H209 315 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 C11orf49Q9H6J7 331 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 NDUFB11Q9NX14 153 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 GRHPRQ9UBQ7 328 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 KLHL21Q9UJP4 597 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 POLHQ9Y253 713 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 AK6Q9Y3D8 172 aaKnown RBP6.27□□□□□ -1.41
CSDE1-205ENST00000438362 OR51B4Q9Y5P0 310 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 KIAA0100Q14667 2235 aaKnown RBP6.27□□□□□ -1.41
CSDE1-205ENST00000438362 ARID1BQ8NFD5 2236 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-205ENST00000438362 KCNE1BA0A087WTH5 132 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 KANTRA0A1W2PQU2 76 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 ANKRD34BA5PLL1 514 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 ARRDC5A6NEK1 342 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 WASHC1A8K0Z3 465 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 KIAA0355O15063 1070 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 FMO6PO60774 539 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 SLC43A1O75387 559 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 RP2O75695 350 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 NDUFB2O95178 105 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 AIFM1O95831 613 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 CSN2P05814 226 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 GKN3PP0CG01 181 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 C5AR1P21730 350 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 VSX2P58304 361 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-205ENST00000438362 REEP5Q00765 189 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 COL9A2Q14055 689 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-205ENST00000438362 EFR3AQ14156 821 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 AKIRIN2Q53H80 203 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 PRAMEF17Q5VTA0 474 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 SAXO2Q658L1 398 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 FCRLBQ6BAA4 426 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 IL20RBQ6UXL0 311 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 B3GLCTQ6Y288 498 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 Q6ZNB5 142 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 CCDC190Q86UF4 302 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 TPRA1Q86W33 373 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 ATCAYQ86WG3 371 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 MMP21Q8N119 569 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 OR52E1Q8NGJ3 308 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 SMPDL3BQ92485 455 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 GAL3ST3Q96A11 431 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 NXPE2Q96DL1 559 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 BPIFA2Q96DR5 249 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 C4orf36Q96KX1 117 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 SLC17A9Q9BYT1 436 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 TBL1XR1Q9BZK7 514 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 B3GNT4Q9C0J1 378 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.27□□□□□ -1.41
CSDE1-205ENST00000438362 SLC28A3Q9HAS3 691 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 TRPV4Q9HBA0 871 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 IFT46Q9NQC8 304 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 INPP5EQ9NRR6 644 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 KLHL9Q9P2J3 617 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 RABL2AQ9UBK7 228 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-205ENST00000438362 RABL2BQ9UNT1 228 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 OR6C74A6NCV1 312 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 C2orf74A8MZ97 194 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 RNGTTO60942 597 aaKnown RBP6.27□□□□□ -1.41
CSDE1-205ENST00000438362 PAHP00439 452 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 CD22P20273 847 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 GIFP27352 417 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 IGFALSP35858 605 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 ETV5P41161 510 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 ETV1P50549 477 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 BLKP51451 505 aa6.27□□□□□ -1.41
CSDE1-205ENST00000438362 CTBP2P56545 445 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms