RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 RACK1P63244 317 aaKnown RBP10.54□□□□□ -0.72
USP4-205ENST00000431357 CD83Q01151 205 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 TRAM1Q15629 374 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 CST6Q15828 149 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 ZNF791Q3KP31 576 aaPredicted RBP10.54□□□□□ -0.72
USP4-205ENST00000431357 ARHGAP11BQ3KRB8 267 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 EOGTQ5NDL2 527 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 C6orf132Q5T0Z8 1188 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 ZNF425Q6IV72 752 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 MFSD12Q6NUT3 480 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 FRRS1Q6ZNA5 592 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 KLBQ86Z14 1044 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 SFTPA1Q8IWL2 248 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 RNF113BQ8IZP6 322 aaKnown RBP10.54□□□□□ -0.72
USP4-205ENST00000431357 ACBD7Q8N6N7 88 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 ZFAND1Q8TCF1 268 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 KLK6Q92876 244 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 GAL3ST3Q96A11 431 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 KCTD12Q96CX2 325 aaKnown RBP10.54□□□□□ -0.72
USP4-205ENST00000431357 ASB16Q96NS5 453 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 MARVELD1Q9BSK0 173 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 C1QTNF2Q9BXJ5 285 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 POLMQ9NP87 494 aaPredicted RBP10.54□□□□□ -0.72
USP4-205ENST00000431357 INPP5EQ9NRR6 644 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 BABAM2Q9NXR7 383 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 ING3Q9NXR8 418 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 OBP2AQ9NY56 170 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 PTGFRNQ9P2B2 879 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 MOSPD1Q9UJG1 213 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 KCNK6Q9Y257 313 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 ALG5Q9Y673 324 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 HEATR5BQ9P2D3 2071 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 UNC119BA6NIH7 251 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 OR6C70A6NIJ9 312 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 H0YC42 278 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 GTPBP1O00178 669 aaKnown RBP10.54□□□□□ -0.72
USP4-205ENST00000431357 MID1O15344 667 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 RNF13O43567 381 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 THY1P04216 161 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 ASGR2P07307 311 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 THBS1P07996 1170 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 C5AR1P21730 350 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 CAPZA2P47755 286 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 BTN3A2P78410 334 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 RGS1Q08116 209 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 P2RY14Q15391 338 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 CEP78Q5JTW2 689 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 RPL13AP3Q6NVV1 102 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 SYCE2Q6PIF2 218 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 TMEM91Q6ZNR0 172 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 TRILQ7L0X0 811 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 MEPCEQ7L2J0 689 aaKnown RBP10.54□□□□□ -0.72
USP4-205ENST00000431357 RANBP3LQ86VV4 465 aaPredicted RBP10.54□□□□□ -0.72
USP4-205ENST00000431357 CPOQ8IVL8 374 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 UBE2J2Q8N2K1 259 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 LRRC25Q8N386 305 aaPredicted RBP10.54□□□□□ -0.72
USP4-205ENST00000431357 FBXL6Q8N531 539 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 OR52L1Q8NGH7 329 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 SAMD8Q96LT4 415 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 RNF32Q9H0A6 362 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 RSPH9Q9H1X1 276 aaPredicted RBP10.54□□□□□ -0.72
USP4-205ENST00000431357 KIR3DX1Q9H7L2 352 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 HINT3Q9NQE9 182 aaKnown RBP10.54□□□□□ -0.72
USP4-205ENST00000431357 PRDM9Q9NQV7 894 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 ACOXLQ9NUZ1 547 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 SLC17A4Q9Y2C5 497 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 WDR45Q9Y484 360 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 COLEC10Q9Y6Z7 277 aa10.54□□□□□ -0.72
USP4-205ENST00000431357 CD8B2A6NJW9 211 aa10.53□□□□□ -0.72
USP4-205ENST00000431357 FCMRO60667 390 aa10.53□□□□□ -0.72
USP4-205ENST00000431357 RNGTTO60942 597 aaKnown RBP10.53□□□□□ -0.72
USP4-205ENST00000431357 C1QBP02746 253 aa10.53□□□□□ -0.72
USP4-205ENST00000431357 CEACAM5P06731 702 aa10.53□□□□□ -0.72
USP4-205ENST00000431357 CD8BP10966 210 aa10.53□□□□□ -0.72
USP4-205ENST00000431357 F8A1P23610 371 aa10.53□□□□□ -0.72
USP4-205ENST00000431357 PEBP1P30086 187 aaKnown RBP10.53□□□□□ -0.72
USP4-205ENST00000431357 GCGRP47871 477 aa10.53□□□□□ -0.72
USP4-205ENST00000431357 GZMKP49863 264 aa10.53□□□□□ -0.72
USP4-205ENST00000431357 RPS15AP62244 130 aaKnown RBP10.53□□□□□ -0.72
USP4-205ENST00000431357 SHC2P98077 582 aa10.53□□□□□ -0.72
USP4-205ENST00000431357 FAPQ12884 760 aa10.53□□□□□ -0.72
USP4-205ENST00000431357 DUSP8Q13202 625 aa10.53□□□□□ -0.72
USP4-205ENST00000431357 RPE65Q16518 533 aa10.53□□□□□ -0.72
USP4-205ENST00000431357 BICRALQ6AI39 1079 aa10.53□□□□□ -0.72
USP4-205ENST00000431357 HBMQ6B0K9 141 aa10.53□□□□□ -0.72
USP4-205ENST00000431357 UTS2BQ765I0 119 aa10.53□□□□□ -0.72
USP4-205ENST00000431357 ELMOD2Q8IZ81 293 aa10.53□□□□□ -0.72
USP4-205ENST00000431357 HDDC3Q8N4P3 179 aa10.53□□□□□ -0.72
USP4-205ENST00000431357 YIPF7Q8N8F6 280 aa10.53□□□□□ -0.72
USP4-205ENST00000431357 TMEM255BQ8WV15 326 aa10.53□□□□□ -0.72
USP4-205ENST00000431357 KAT2AQ92830 837 aa10.53□□□□□ -0.72
USP4-205ENST00000431357 SENP5Q96HI0 755 aaPredicted RBP10.53□□□□□ -0.72
USP4-205ENST00000431357 C10orf90Q96M02 699 aa10.53□□□□□ -0.72
USP4-205ENST00000431357 DCLRE1CQ96SD1 692 aaKnown RBP10.53□□□□□ -0.72
USP4-205ENST00000431357 UBQLN3Q9H347 655 aa10.53□□□□□ -0.72
USP4-205ENST00000431357 B3GAT2Q9NPZ5 323 aa10.53□□□□□ -0.72
USP4-205ENST00000431357 RPRD1BQ9NQG5 326 aaKnown RBP10.53□□□□□ -0.72
USP4-205ENST00000431357 KLF15Q9UIH9 416 aa10.53□□□□□ -0.72
USP4-205ENST00000431357 BOLA1Q9Y3E2 137 aa10.53□□□□□ -0.72
USP4-205ENST00000431357 CSNK1G3Q9Y6M4 447 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms