RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 GLRX2Q9NS18 164 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 ACSS1Q9NUB1 689 aaPredicted RBP13.37□□□□□ -0.27
MSH5-208ENST00000429846 OXSMQ9NWU1 459 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 NTMQ9P121 344 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 MID2Q9UJV3 735 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 VDAC3Q9Y277 283 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 TMED5Q9Y3A6 229 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 HEATR5AQ86XA9 2040 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 A0A1W2PPM1 405 aa13.36□□□□□ -0.27
MSH5-208ENST00000429846 GXYLT2A0PJZ3 443 aa13.36□□□□□ -0.27
MSH5-208ENST00000429846 EIF1AYO14602 144 aaKnown RBP13.36□□□□□ -0.27
MSH5-208ENST00000429846 SS18L1O75177 396 aaPredicted RBP13.36□□□□□ -0.27
MSH5-208ENST00000429846 HSPA4LO95757 839 aa13.36□□□□□ -0.27
MSH5-208ENST00000429846 IGKV1D-16P01601 117 aa13.36□□□□□ -0.27
MSH5-208ENST00000429846 FAM153BP0C7A2 387 aa13.36□□□□□ -0.27
MSH5-208ENST00000429846 DDX5P17844 614 aaKnown RBP13.36□□□□□ -0.27
MSH5-208ENST00000429846 IL11P20809 199 aa13.36□□□□□ -0.27
MSH5-208ENST00000429846 CRHR1P34998 444 aa13.36□□□□□ -0.27
MSH5-208ENST00000429846 EIF1AXP47813 144 aaKnown RBP13.36□□□□□ -0.27
MSH5-208ENST00000429846 ZNF41P51814 821 aaPredicted RBP13.36□□□□□ -0.27
MSH5-208ENST00000429846 CTBP2P56545 445 aa13.36□□□□□ -0.27
MSH5-208ENST00000429846 FAM153CQ494X1 144 aa13.36□□□□□ -0.27
MSH5-208ENST00000429846 BEX5Q5H9J7 111 aa13.36□□□□□ -0.27
MSH5-208ENST00000429846 LIPMQ5VYY2 423 aa13.36□□□□□ -0.27
MSH5-208ENST00000429846 ZCCHC12Q6PEW1 402 aa13.36□□□□□ -0.27
MSH5-208ENST00000429846 APOOLQ6UXV4 268 aa13.36□□□□□ -0.27
MSH5-208ENST00000429846 CCDC63Q8NA47 563 aa13.36□□□□□ -0.27
MSH5-208ENST00000429846 NUP43Q8NFH3 380 aa13.36□□□□□ -0.27
MSH5-208ENST00000429846 OR10D3Q8NH80 312 aa13.36□□□□□ -0.27
MSH5-208ENST00000429846 KIF18AQ8NI77 898 aa13.36□□□□□ -0.27
MSH5-208ENST00000429846 SLC9A6Q92581 669 aa13.36□□□□□ -0.27
MSH5-208ENST00000429846 PPCDCQ96CD2 204 aa13.36□□□□□ -0.27
MSH5-208ENST00000429846 ARSGQ96EG1 525 aa13.36□□□□□ -0.27
MSH5-208ENST00000429846 ZC3HAV1LQ96H79 300 aaKnown RBP13.36□□□□□ -0.27
MSH5-208ENST00000429846 ADGRG7Q96K78 797 aa13.36□□□□□ -0.27
MSH5-208ENST00000429846 FCRL1Q96LA6 429 aa13.36□□□□□ -0.27
MSH5-208ENST00000429846 TRMOQ9BU70 441 aa13.36□□□□□ -0.27
MSH5-208ENST00000429846 REEP4Q9H6H4 257 aa13.36□□□□□ -0.27
MSH5-208ENST00000429846 TNFRSF12AQ9NP84 129 aa13.36□□□□□ -0.27
MSH5-208ENST00000429846 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.35□□□□□ -0.27
MSH5-208ENST00000429846 TMCC2O75069 709 aa13.35□□□□□ -0.27
MSH5-208ENST00000429846 CHEK2O96017 543 aa13.35□□□□□ -0.27
MSH5-208ENST00000429846 CPA3P15088 417 aa13.35□□□□□ -0.27
MSH5-208ENST00000429846 HPGDP15428 266 aa13.35□□□□□ -0.27
MSH5-208ENST00000429846 SDC1P18827 310 aa13.35□□□□□ -0.27
MSH5-208ENST00000429846 ME2P23368 584 aa13.35□□□□□ -0.27
MSH5-208ENST00000429846 NR1H2P55055 460 aa13.35□□□□□ -0.27
MSH5-208ENST00000429846 MANFP55145 182 aaKnown RBP13.35□□□□□ -0.27
MSH5-208ENST00000429846 RAC1P63000 192 aa13.35□□□□□ -0.27
MSH5-208ENST00000429846 PDE7AQ13946 482 aa13.35□□□□□ -0.27
MSH5-208ENST00000429846 PLPPR5Q32ZL2 321 aa13.35□□□□□ -0.27
MSH5-208ENST00000429846 PDSS1Q5T2R2 415 aa13.35□□□□□ -0.27
MSH5-208ENST00000429846 CLEC6AQ6EIG7 209 aa13.35□□□□□ -0.27
MSH5-208ENST00000429846 PPP4R4Q6NUP7 873 aa13.35□□□□□ -0.27
MSH5-208ENST00000429846 BEND4Q6ZU67 534 aa13.35□□□□□ -0.27
MSH5-208ENST00000429846 ESPNLQ6ZVH7 1005 aa13.35□□□□□ -0.27
MSH5-208ENST00000429846 Q71RC1 249 aaPredicted RBP13.35□□□□□ -0.27
MSH5-208ENST00000429846 SZRD1Q7Z422 152 aa13.35□□□□□ -0.27
MSH5-208ENST00000429846 YTHDF3Q7Z739 585 aaKnown RBP13.35□□□□□ -0.27
MSH5-208ENST00000429846 TDRPQ86YL5 185 aa13.35□□□□□ -0.27
MSH5-208ENST00000429846 OR4C3Q8NH37 302 aa13.35□□□□□ -0.27
MSH5-208ENST00000429846 FAM110BQ8TC76 370 aa13.35□□□□□ -0.27
MSH5-208ENST00000429846 CIDECQ96AQ7 238 aaPredicted RBP13.35□□□□□ -0.27
MSH5-208ENST00000429846 MTERF3Q96E29 417 aa13.35□□□□□ -0.27
MSH5-208ENST00000429846 GIMAP5Q96F15 307 aa13.35□□□□□ -0.27
MSH5-208ENST00000429846 Q96MF0 132 aa13.35□□□□□ -0.27
MSH5-208ENST00000429846 HS3ST6Q96QI5 342 aa13.35□□□□□ -0.27
MSH5-208ENST00000429846 GSX2Q9BZM3 304 aa13.35□□□□□ -0.27
MSH5-208ENST00000429846 KLHL4Q9C0H6 718 aa13.35□□□□□ -0.27
MSH5-208ENST00000429846 OR10A4Q9H209 315 aa13.35□□□□□ -0.27
MSH5-208ENST00000429846 FN1P02751 2386 aaKnown RBP13.34□□□□□ -0.27
MSH5-208ENST00000429846 A0A1W2PQD3 144 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 A0A1W2PRB8 838 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 SHISA8B8ZZ34 492 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 SCDO00767 359 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 COPEO14579 308 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 AZIN1O14977 448 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 ADAMDEC1O15204 470 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 GMFGO60234 142 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 KCNK2O95069 426 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 SYNGR4O95473 234 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 LOXP28300 417 aaPredicted RBP13.34□□□□□ -0.27
MSH5-208ENST00000429846 ASMTP46597 345 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 SERPINB4P48594 390 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 PRKAG1P54619 331 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 SLC18A2Q05940 514 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 EXOC3L2Q2M3D2 409 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 CTU2Q2VPK5 515 aaKnown RBP13.34□□□□□ -0.27
MSH5-208ENST00000429846 ZNF385BQ569K4 471 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 GTF2IRD2BQ6EKJ0 949 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 ANKRD26P1Q6NSI1 321 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 MFSD12Q6NUT3 480 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 STAC2Q6ZMT1 411 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 R3HCC1LQ7Z5L2 792 aaKnown RBP13.34□□□□□ -0.27
MSH5-208ENST00000429846 GTF2IRD2Q86UP8 949 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 STK32CQ86UX6 486 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 EIF1ADQ8N9N8 165 aaKnown RBP13.34□□□□□ -0.27
MSH5-208ENST00000429846 SLC16A11Q8NCK7 471 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 PPP1R14CQ8TAE6 165 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 TSSK3Q96PN8 268 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms