RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 MICALL2Q8IY33 904 aa15.08■□□□□ 0
C9orf3-206ENST00000428313 RNF175Q8N4F7 328 aa15.08■□□□□ 0
C9orf3-206ENST00000428313 ASB13Q8WXK3 278 aa15.08■□□□□ 0
C9orf3-206ENST00000428313 TINF2Q9BSI4 451 aa15.08■□□□□ 0
C9orf3-206ENST00000428313 IL17CQ9P0M4 197 aa15.08■□□□□ 0
C9orf3-206ENST00000428313 ABRACLQ9P1F3 81 aa15.08■□□□□ 0
C9orf3-206ENST00000428313 ENTPD4Q9Y227 616 aa15.08■□□□□ 0
C9orf3-206ENST00000428313 CARHSP1Q9Y2V2 147 aaKnown RBP15.08■□□□□ 0
C9orf3-206ENST00000428313 PRSS21Q9Y6M0 314 aa15.08■□□□□ 0
C9orf3-206ENST00000428313 A0A1W2PQH9 124 aa15.07■□□□□ 0
C9orf3-206ENST00000428313 TRAPPC13A5PLN9 417 aa15.07■□□□□ 0
C9orf3-206ENST00000428313 ZNF729A6NN14 1252 aaPredicted RBP15.07■□□□□ 0
C9orf3-206ENST00000428313 ZNF3P17036 446 aa15.07■□□□□ 0
C9orf3-206ENST00000428313 MMP11P24347 488 aa15.07■□□□□ 0
C9orf3-206ENST00000428313 OR10A3P58181 314 aa15.07■□□□□ 0
C9orf3-206ENST00000428313 RNF212Q495C1 297 aa15.07■□□□□ 0
C9orf3-206ENST00000428313 LIPJQ5W064 366 aa15.07■□□□□ 0
C9orf3-206ENST00000428313 FAM109BQ6ICB4 259 aaPredicted RBP15.07■□□□□ 0
C9orf3-206ENST00000428313 CDC73Q6P1J9 531 aa15.07■□□□□ 0
C9orf3-206ENST00000428313 NHLRC1Q6VVB1 395 aa15.07■□□□□ 0
C9orf3-206ENST00000428313 SMAP2Q8WU79 429 aaPredicted RBP15.07■□□□□ 0
C9orf3-206ENST00000428313 TRMT2BQ96GJ1 504 aaKnown RBP15.07■□□□□ 0
C9orf3-206ENST00000428313 MS4A4EQ96PG1 132 aa15.07■□□□□ 0
C9orf3-206ENST00000428313 ACBD6Q9BR61 282 aa15.07■□□□□ 0
C9orf3-206ENST00000428313 SLC38A1Q9H2H9 487 aa15.07■□□□□ 0
C9orf3-206ENST00000428313 CACYBPQ9HB71 228 aaKnown RBP15.07■□□□□ 0
C9orf3-206ENST00000428313 NOX3Q9HBY0 568 aa15.07■□□□□ 0
C9orf3-206ENST00000428313 MAP4K5Q9Y4K4 846 aa15.07■□□□□ 0
C9orf3-206ENST00000428313 A0A1W2PRQ8 180 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 EIF4E2O60573 245 aaKnown RBP15.06■□□□□ 0
C9orf3-206ENST00000428313 C6orf47O95873 294 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 DDX6P26196 483 aaKnown RBP eCLIP15.06■□□□□ 0
C9orf3-206ENST00000428313 ATP5C1P36542 298 aaKnown RBP15.06■□□□□ 0
C9orf3-206ENST00000428313 SNRPEP62304 92 aaKnown RBP15.06■□□□□ 0
C9orf3-206ENST00000428313 CHIT1Q13231 466 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 TRAM2Q15035 370 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 ZXDCQ2QGD7 858 aaPredicted RBP15.06■□□□□ 0
C9orf3-206ENST00000428313 ZNF385BQ569K4 471 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 RBMS3Q6XE24 437 aaKnown RBP15.06■□□□□ 0
C9orf3-206ENST00000428313 FAM122BQ7Z309 247 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 STX12Q86Y82 276 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 GPR32P1Q8NGA4 272 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 OR4F15Q8NGB8 312 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 RAD51AP1Q96B01 352 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 BOCQ9BWV1 1114 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 GSDMCQ9BYG8 508 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 RNF122Q9H9V4 155 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 C14orf105Q9NVL8 296 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 BACE2Q9Y5Z0 518 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 MEX3AA1L020 520 aaKnown RBP15.06■□□□□ 0
C9orf3-206ENST00000428313 C5orf52A6NGY3 159 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 TNFRSF10BO14763 440 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 PEX10O60683 326 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 ZNF286BP0CG31 522 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 HOXD9P28356 352 aaPredicted RBP15.06■□□□□ 0
C9orf3-206ENST00000428313 FZD5Q13467 585 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 IL10RAQ13651 578 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 MELKQ14680 651 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 TEX30Q5JUR7 227 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 MANEAQ5SRI9 462 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 OLFML2AQ68BL7 652 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 C1orf94Q6P1W5 598 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 PODNL1Q6PEZ8 512 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 RNF113BQ8IZP6 322 aaKnown RBP15.06■□□□□ 0
C9orf3-206ENST00000428313 EID2Q8N6I1 236 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 TMEM185AQ8NFB2 350 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 THAP6Q8TBB0 222 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 RXFP4Q8TDU9 374 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 WDR89Q96FK6 387 aaPredicted RBP15.06■□□□□ 0
C9orf3-206ENST00000428313 TMEM41AQ96HV5 264 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 CMTM3Q96MX0 182 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 C16orf70Q9BSU1 422 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 BRF2Q9HAW0 419 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 KLF15Q9UIH9 416 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 RCE1Q9Y256 329 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 NLRC5Q86WI3 1866 aa15.06■□□□□ 0
C9orf3-206ENST00000428313 GSAPA4D1B5 854 aa15.05■□□□□ 0
C9orf3-206ENST00000428313 ZNF749O43361 778 aa15.05■□□□□ 0
C9orf3-206ENST00000428313 UBXN7O94888 489 aa15.05■□□□□ 0
C9orf3-206ENST00000428313 RPL3P39023 403 aaKnown RBP15.05■□□□□ 0
C9orf3-206ENST00000428313 DDX39BQ13838 428 aaKnown RBP15.05■□□□□ 0
C9orf3-206ENST00000428313 CKAP5Q14008 2032 aa15.05■□□□□ 0
C9orf3-206ENST00000428313 FUT10Q6P4F1 479 aa15.05■□□□□ 0
C9orf3-206ENST00000428313 ZNF783Q6ZMS7 281 aa15.05■□□□□ 0
C9orf3-206ENST00000428313 MRPS31Q92665 395 aaKnown RBP15.05■□□□□ 0
C9orf3-206ENST00000428313 RBM14Q96PK6 669 aaKnown RBP15.05■□□□□ 0
C9orf3-206ENST00000428313 MFFQ9GZY8 342 aa15.05■□□□□ 0
C9orf3-206ENST00000428313 SMG9Q9H0W8 520 aaKnown RBP15.05■□□□□ 0
C9orf3-206ENST00000428313 MVB12BQ9H7P6 319 aa15.05■□□□□ 0
C9orf3-206ENST00000428313 NINQ8N4C6 2090 aa15.05■□□□□ -0
C9orf3-206ENST00000428313 TTLL8A6PVC2 850 aa15.05■□□□□ -0
C9orf3-206ENST00000428313 GFYI3L273 518 aa15.05■□□□□ -0
C9orf3-206ENST00000428313 GPR37L1O60883 481 aa15.05■□□□□ -0
C9orf3-206ENST00000428313 DPEP1P16444 411 aa15.05■□□□□ -0
C9orf3-206ENST00000428313 MPPED2Q15777 294 aa15.05■□□□□ -0
C9orf3-206ENST00000428313 KCNA10Q16322 511 aa15.05■□□□□ -0
C9orf3-206ENST00000428313 MAPK14Q16539 360 aa15.05■□□□□ -0
C9orf3-206ENST00000428313 SLC25A35Q3KQZ1 300 aa15.05■□□□□ -0
C9orf3-206ENST00000428313 LYPLAL1Q5VWZ2 237 aa15.05■□□□□ -0
C9orf3-206ENST00000428313 ZNF425Q6IV72 752 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms