RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 MAGED4Q96JG8 741 aa5.19□□□□□ -1.58
LINC00458-201ENST00000423442 BARD1Q99728 777 aaKnown RBP5.19□□□□□ -1.58
LINC00458-201ENST00000423442 FAIM2Q9BWQ8 316 aa5.19□□□□□ -1.58
LINC00458-201ENST00000423442 ERVK-6Q9BXR3 956 aa5.19□□□□□ -1.58
LINC00458-201ENST00000423442 MS4A8Q9BY19 250 aa5.19□□□□□ -1.58
LINC00458-201ENST00000423442 DDX31Q9H8H2 851 aaKnown RBP5.19□□□□□ -1.58
LINC00458-201ENST00000423442 HPF1Q9NWY4 346 aa5.19□□□□□ -1.58
LINC00458-201ENST00000423442 SH3BP4Q9P0V3 963 aa5.19□□□□□ -1.58
LINC00458-201ENST00000423442 VPS29Q9UBQ0 182 aa5.19□□□□□ -1.58
LINC00458-201ENST00000423442 PCTPQ9UKL6 214 aa5.19□□□□□ -1.58
LINC00458-201ENST00000423442 SLC12A4Q9UP95 1085 aa5.19□□□□□ -1.58
LINC00458-201ENST00000423442 KLF13Q9Y2Y9 288 aaPredicted RBP5.19□□□□□ -1.58
LINC00458-201ENST00000423442 CSAG2Q9Y5P2 127 aa5.19□□□□□ -1.58
LINC00458-201ENST00000423442 POLEQ07864 2286 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 GNG14A0A1W2PPG7 69 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 LRRC14BA6NHZ5 514 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 GLOD5A6NK44 160 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 SMIM23A6NLE4 172 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 HMGB1P1B2RPK0 211 aaPredicted RBP5.18□□□□□ -1.58
LINC00458-201ENST00000423442 NPIPA5E9PKD4 350 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 H3BQF6 201 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 WWP2O00308 870 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 CCL21O00585 134 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 PLPP1O14494 284 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 OR7A17O14581 309 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 TP53I11O14683 189 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 ASNA1O43681 348 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 CDH16O75309 829 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 OR2J2O76002 312 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 NADKO95544 446 aaPredicted RBP5.18□□□□□ -1.58
LINC00458-201ENST00000423442 CHEK2O96017 543 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 SLC35E2P0CK97 266 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 CPA3P15088 417 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 ABOP16442 354 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 EPORP19235 508 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 CSNK2A2P19784 350 aaPredicted RBP5.18□□□□□ -1.58
LINC00458-201ENST00000423442 PCSK6P29122 969 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 HSD17B3P37058 310 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 HTR3AP46098 478 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 STT3AP46977 705 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 ALDH9A1P49189 494 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 XKP51811 444 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 SMSP52788 366 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 CDH13P55290 713 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 PKNOX1P55347 436 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 PLGLB1Q02325 96 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 FOLH1Q04609 750 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 ACSM2AQ08AH3 577 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 ART3Q13508 389 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 E2F2Q14209 437 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 SLC22A10Q63ZE4 541 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 ACSM2BQ68CK6 577 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 AWAT2Q6E213 333 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 RGS9BPQ6ZS82 235 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 GPRIN3Q6ZVF9 776 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 GALNTL5Q7Z4T8 443 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 SAMD14Q8IZD0 417 aaPredicted RBP5.18□□□□□ -1.58
LINC00458-201ENST00000423442 ST13P4Q8IZP2 240 aaPredicted RBP5.18□□□□□ -1.58
LINC00458-201ENST00000423442 TAGAPQ8N103 731 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 CYP4Z2PQ8N1L4 340 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 ZCCHC7Q8N3Z6 543 aaKnown RBP5.18□□□□□ -1.58
LINC00458-201ENST00000423442 KIF2BQ8N4N8 673 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 SLC15A4Q8N697 577 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 GBP7Q8N8V2 638 aaPredicted RBP5.18□□□□□ -1.58
LINC00458-201ENST00000423442 ANKRD42Q8N9B4 389 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 NFAM1Q8NET5 270 aaPredicted RBP5.18□□□□□ -1.58
LINC00458-201ENST00000423442 OR4F6Q8NGB9 312 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 POC1BQ8TC44 478 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 SLC22A8Q8TCC7 542 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 PTPMT1Q8WUK0 201 aaPredicted RBP5.18□□□□□ -1.58
LINC00458-201ENST00000423442 PPWD1Q96BP3 646 aaKnown RBP5.18□□□□□ -1.58
LINC00458-201ENST00000423442 SGCZQ96LD1 299 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 SIGLEC12Q96PQ1 595 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 CNPPD1Q9BV87 410 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 ALG8Q9BVK2 526 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 AMBRA1Q9C0C7 1298 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 BRF2Q9HAW0 419 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 MID1IP1Q9NPA3 183 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 PFDN4Q9NQP4 134 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 SERTAD4Q9NUC0 356 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 EHD3Q9NZN3 535 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 TMEM216Q9P0N5 145 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 XPR1Q9UBH6 696 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 MID2Q9UJV3 735 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 NPIPA1Q9UND3 350 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 PPIEQ9UNP9 301 aaKnown RBP5.18□□□□□ -1.58
LINC00458-201ENST00000423442 ATG4BQ9Y4P1 393 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 ZNF780BQ9Y6R6 833 aa5.18□□□□□ -1.58
LINC00458-201ENST00000423442 ANKHD1Q8IWZ3 2542 aaKnown RBP5.17□□□□□ -1.58
LINC00458-201ENST00000423442 C2orf92A0A1B0GVN3 265 aa5.17□□□□□ -1.58
LINC00458-201ENST00000423442 A0A1W2PPM1 405 aa5.17□□□□□ -1.58
LINC00458-201ENST00000423442 C1orf226A1L170 272 aa5.17□□□□□ -1.58
LINC00458-201ENST00000423442 A8MT66 165 aa5.17□□□□□ -1.58
LINC00458-201ENST00000423442 MANBAO00462 879 aa5.17□□□□□ -1.58
LINC00458-201ENST00000423442 PPP6CO00743 305 aa5.17□□□□□ -1.58
LINC00458-201ENST00000423442 TFECO14948 347 aaPredicted RBP5.17□□□□□ -1.58
LINC00458-201ENST00000423442 PIP5K1CO60331 668 aa5.17□□□□□ -1.58
LINC00458-201ENST00000423442 NME2P1O60361 137 aa5.17□□□□□ -1.58
LINC00458-201ENST00000423442 CDC40O60508 579 aaKnown RBP eCLIP5.17□□□□□ -1.58
LINC00458-201ENST00000423442 GLRA3O75311 464 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms