RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 CELA3AP09093 270 aa12.15□□□□□ -0.46
TMEM248-203ENST00000418375 PPIBP23284 216 aaKnown RBP12.15□□□□□ -0.46
TMEM248-203ENST00000418375 GCKP35557 465 aa12.15□□□□□ -0.46
TMEM248-203ENST00000418375 CRATP43155 626 aa12.15□□□□□ -0.46
TMEM248-203ENST00000418375 ATP12AP54707 1039 aa12.15□□□□□ -0.46
TMEM248-203ENST00000418375 MAPRE2Q15555 327 aa12.15□□□□□ -0.46
TMEM248-203ENST00000418375 GPAT3Q53EU6 434 aa12.15□□□□□ -0.46
TMEM248-203ENST00000418375 PAGE3Q5JUK9 113 aa12.15□□□□□ -0.46
TMEM248-203ENST00000418375 LRIF1Q5T3J3 769 aa12.15□□□□□ -0.46
TMEM248-203ENST00000418375 OR5M10Q6IEU7 315 aa12.15□□□□□ -0.46
TMEM248-203ENST00000418375 Q6ZPB1 254 aaPredicted RBP12.15□□□□□ -0.46
TMEM248-203ENST00000418375 DUSP19Q8WTR2 217 aa12.15□□□□□ -0.46
TMEM248-203ENST00000418375 ROPN1LQ96C74 230 aa12.15□□□□□ -0.46
TMEM248-203ENST00000418375 AURKBQ96GD4 344 aaPredicted RBP12.15□□□□□ -0.46
TMEM248-203ENST00000418375 NMUR2Q9GZQ4 415 aa12.15□□□□□ -0.46
TMEM248-203ENST00000418375 ZNF350Q9GZX5 532 aa12.15□□□□□ -0.46
TMEM248-203ENST00000418375 PTGES2Q9H7Z7 377 aa12.15□□□□□ -0.46
TMEM248-203ENST00000418375 THUMPD1Q9NXG2 353 aaKnown RBP12.15□□□□□ -0.46
TMEM248-203ENST00000418375 SUCOQ9UBS9 1254 aaKnown RBP12.15□□□□□ -0.46
TMEM248-203ENST00000418375 DKKL1Q9UK85 242 aa12.15□□□□□ -0.46
TMEM248-203ENST00000418375 ZNF835Q9Y2P0 537 aa12.15□□□□□ -0.46
TMEM248-203ENST00000418375 WDR45Q9Y484 360 aa12.15□□□□□ -0.46
TMEM248-203ENST00000418375 LIPGQ9Y5X9 500 aa12.15□□□□□ -0.46
TMEM248-203ENST00000418375 SVILO95425 2214 aa12.15□□□□□ -0.46
TMEM248-203ENST00000418375 EXPH5Q8NEV8 1989 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 TMEM247A6NEH6 219 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 CLIC1O00299 241 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 BCKDKO14874 412 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 SLC22A2O15244 555 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 C1QCP02747 245 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 NR2F1P10589 423 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 ENDOUP21128 410 aaKnown RBP12.14□□□□□ -0.47
TMEM248-203ENST00000418375 DRD4P21917 467 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 SRD5A2P31213 254 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 DSCR4P56555 118 aaPredicted RBP12.14□□□□□ -0.47
TMEM248-203ENST00000418375 DSTNP60981 165 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 KLF10Q13118 480 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 GANABQ14697 944 aaKnown RBP12.14□□□□□ -0.47
TMEM248-203ENST00000418375 GPR68Q15743 365 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 COX20Q5RI15 118 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.14□□□□□ -0.47
TMEM248-203ENST00000418375 APOOLQ6UXV4 268 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 MTERF4Q7Z6M4 381 aaKnown RBP12.14□□□□□ -0.47
TMEM248-203ENST00000418375 ZNF614Q8N883 585 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 FADS6Q8N9I5 356 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 FAM83FQ8NEG4 500 aaPredicted RBP12.14□□□□□ -0.47
TMEM248-203ENST00000418375 OR14L1PQ8NHC6 308 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 NEIL3Q8TAT5 605 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 FAM57AQ8TBR7 257 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 OIT3Q8WWZ8 545 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 SARAFQ96BY9 339 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 TRNT1Q96Q11 434 aaKnown RBP12.14□□□□□ -0.47
TMEM248-203ENST00000418375 RTN4RQ9BZR6 473 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 OR2B2Q9GZK3 357 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 SLC6A15Q9H2J7 730 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 DSN1Q9H410 356 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 P2RX2Q9UBL9 471 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.14□□□□□ -0.47
TMEM248-203ENST00000418375 FBXL2Q9UKC9 423 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 DTNAQ9Y4J8 743 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 CAPN7Q9Y6W3 813 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 NINQ8N4C6 2090 aa12.14□□□□□ -0.47
TMEM248-203ENST00000418375 CELSR2Q9HCU4 2923 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 EML6Q6ZMW3 1958 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 IGLV3-32A0A0A0MS00 114 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 C15orf38-AP3S2A0A0A6YYH1 394 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 NPIPA5A0A0B4J1W7 369 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 EVPLLA8MZ36 301 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 PRSS44E7EML9 344 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 NPIPA2E9PIF3 369 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 NPIPA7E9PJI5 369 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 NPIPB9F8W1W9 429 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 NPIPA3F8WFD2 350 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 CCL21O00585 134 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 ADAM10O14672 748 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 TPOP07202 933 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 NPIPA8P0DM63 369 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 ETFAP13804 333 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 CD1EP15812 388 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 HOXB9P17482 250 aaPredicted RBP12.13□□□□□ -0.47
TMEM248-203ENST00000418375 DPP4P27487 766 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 MSX1P28360 303 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 CA7P43166 264 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 MVDP53602 400 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 FADDQ13158 208 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 NFYCQ13952 458 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 GNA13Q14344 377 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 ZNF630Q2M218 657 aaPredicted RBP12.13□□□□□ -0.47
TMEM248-203ENST00000418375 MMEL1Q495T6 779 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 KLHL26Q53HC5 615 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 EIPR1Q53HC9 387 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 WIPI1Q5MNZ9 446 aaPredicted RBP12.13□□□□□ -0.47
TMEM248-203ENST00000418375 SP5Q6BEB4 398 aaPredicted RBP12.13□□□□□ -0.47
TMEM248-203ENST00000418375 MTFR2Q6P444 385 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 FGD2Q7Z6J4 655 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 DHDDSQ86SQ9 333 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 YRDCQ86U90 279 aaKnown RBP12.13□□□□□ -0.47
TMEM248-203ENST00000418375 CHERPQ8IWX8 916 aaKnown RBP12.13□□□□□ -0.47
TMEM248-203ENST00000418375 EID3Q8N140 333 aa12.13□□□□□ -0.47
TMEM248-203ENST00000418375 ZNF619Q8N2I2 560 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms