RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 A1L4Q6 167 aa13.37□□□□□ -0.27
CHD1-202ENST00000414220 C9JVG2 144 aa13.37□□□□□ -0.27
CHD1-202ENST00000414220 BMP7P18075 431 aa13.37□□□□□ -0.27
CHD1-202ENST00000414220 ZNF41P51814 821 aaPredicted RBP13.37□□□□□ -0.27
CHD1-202ENST00000414220 EEFSECP57772 596 aaKnown RBP13.37□□□□□ -0.27
CHD1-202ENST00000414220 RPS26P62854 115 aaKnown RBP13.37□□□□□ -0.27
CHD1-202ENST00000414220 CRYZQ08257 329 aaKnown RBP13.37□□□□□ -0.27
CHD1-202ENST00000414220 RAET1LQ5VY80 246 aa13.37□□□□□ -0.27
CHD1-202ENST00000414220 TNFAIP8L2Q6P589 184 aaPredicted RBP13.37□□□□□ -0.27
CHD1-202ENST00000414220 CLEC4FQ8N1N0 589 aa13.37□□□□□ -0.27
CHD1-202ENST00000414220 ZNF614Q8N883 585 aa13.37□□□□□ -0.27
CHD1-202ENST00000414220 FADS6Q8N9I5 356 aa13.37□□□□□ -0.27
CHD1-202ENST00000414220 PHOSPHO1Q8TCT1 267 aa13.37□□□□□ -0.27
CHD1-202ENST00000414220 DMRTA2Q96SC8 542 aa13.37□□□□□ -0.27
CHD1-202ENST00000414220 PIGQQ9BRB3 760 aa13.37□□□□□ -0.27
CHD1-202ENST00000414220 UGT2B28Q9BY64 529 aa13.37□□□□□ -0.27
CHD1-202ENST00000414220 RUBCNLQ9H714 662 aa13.37□□□□□ -0.27
CHD1-202ENST00000414220 POLE3Q9NRF9 147 aa13.37□□□□□ -0.27
CHD1-202ENST00000414220 THUMPD1Q9NXG2 353 aaKnown RBP13.37□□□□□ -0.27
CHD1-202ENST00000414220 FLRT3Q9NZU0 649 aa13.37□□□□□ -0.27
CHD1-202ENST00000414220 CCDC167Q9P0B6 97 aa13.37□□□□□ -0.27
CHD1-202ENST00000414220 TNFRSF10DQ9UBN6 386 aa13.37□□□□□ -0.27
CHD1-202ENST00000414220 EML6Q6ZMW3 1958 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 TENM4Q6N022 2769 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 IGLV3-32A0A0A0MS00 114 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 GSNP06396 782 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 GUSBP08236 651 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 ZCCHC18P0CG32 403 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 OR12D1P0DN82 309 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 PEPDP12955 493 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 CPN1P15169 458 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 PMPCAQ10713 525 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 GNA13Q14344 377 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 GPR68Q15743 365 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 TIGD2Q4W5G0 525 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 GPAT3Q53EU6 434 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 EMC4Q5J8M3 183 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 RNF130Q86XS8 419 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 ULK2Q8IYT8 1036 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 B4GALNT2Q8NHY0 566 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 ITLN2Q8WWU7 325 aaPredicted RBP13.36□□□□□ -0.27
CHD1-202ENST00000414220 SDCCAG3Q96C92 435 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 C1GALT1C1Q96EU7 318 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 THOC1Q96FV9 657 aaKnown RBP13.36□□□□□ -0.27
CHD1-202ENST00000414220 TTYH2Q9BSA4 534 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 INPP5KQ9BT40 448 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 NMUR2Q9GZQ4 415 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 PRDM14Q9GZV8 571 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 CACYBPQ9HB71 228 aaKnown RBP13.36□□□□□ -0.27
CHD1-202ENST00000414220 CHST11Q9NPF2 352 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 FBXO34Q9NWN3 711 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 RPH3AQ9Y2J0 694 aaPredicted RBP13.36□□□□□ -0.27
CHD1-202ENST00000414220 WDR45Q9Y484 360 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 DTNAQ9Y4J8 743 aa13.36□□□□□ -0.27
CHD1-202ENST00000414220 KLF2Q9Y5W3 355 aaPredicted RBP13.36□□□□□ -0.27
CHD1-202ENST00000414220 H0Y3Z8 333 aa13.35□□□□□ -0.27
CHD1-202ENST00000414220 ADAM10O14672 748 aa13.35□□□□□ -0.27
CHD1-202ENST00000414220 HCRTR2O43614 444 aa13.35□□□□□ -0.27
CHD1-202ENST00000414220 CLDN14O95500 239 aa13.35□□□□□ -0.27
CHD1-202ENST00000414220 NUDT14O95848 222 aa13.35□□□□□ -0.27
CHD1-202ENST00000414220 CHRNB4P30926 498 aa13.35□□□□□ -0.27
CHD1-202ENST00000414220 ARFIP2P53365 341 aa13.35□□□□□ -0.27
CHD1-202ENST00000414220 CASP9P55211 416 aa13.35□□□□□ -0.27
CHD1-202ENST00000414220 ADORA2A-AS1P86434 159 aa13.35□□□□□ -0.27
CHD1-202ENST00000414220 BCL2A1Q16548 175 aa13.35□□□□□ -0.27
CHD1-202ENST00000414220 AGKQ53H12 422 aa13.35□□□□□ -0.27
CHD1-202ENST00000414220 HEPHL1Q6MZM0 1159 aa13.35□□□□□ -0.27
CHD1-202ENST00000414220 APOOLQ6UXV4 268 aa13.35□□□□□ -0.27
CHD1-202ENST00000414220 LACC1Q8IV20 430 aa13.35□□□□□ -0.27
CHD1-202ENST00000414220 MEIOBQ8N635 442 aa13.35□□□□□ -0.27
CHD1-202ENST00000414220 GATSQ8NAP1 163 aa13.35□□□□□ -0.27
CHD1-202ENST00000414220 OR9I1Q8NGQ6 314 aa13.35□□□□□ -0.27
CHD1-202ENST00000414220 ZPLD1Q8TCW7 415 aa13.35□□□□□ -0.27
CHD1-202ENST00000414220 PMM1Q92871 262 aa13.35□□□□□ -0.27
CHD1-202ENST00000414220 VPS33AQ96AX1 596 aa13.35□□□□□ -0.27
CHD1-202ENST00000414220 ZBTB8AQ96BR9 441 aa13.35□□□□□ -0.27
CHD1-202ENST00000414220 ROPN1LQ96C74 230 aa13.35□□□□□ -0.27
CHD1-202ENST00000414220 SPDL1Q96EA4 605 aa13.35□□□□□ -0.27
CHD1-202ENST00000414220 CALML5Q9NZT1 146 aa13.35□□□□□ -0.27
CHD1-202ENST00000414220 KCNE3Q9Y6H6 103 aa13.35□□□□□ -0.27
CHD1-202ENST00000414220 HSPB2A8KAH6 182 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 PRSS44E7EML9 344 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 NR5A2O00482 541 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 GMFGO60234 142 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 ZIC3O60481 467 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 EIF4E2O60573 245 aaKnown RBP13.34□□□□□ -0.27
CHD1-202ENST00000414220 EPPINO95925 133 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 IL2RAP01589 272 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 NR2F1P10589 423 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 POU3F2P20265 443 aaPredicted RBP13.34□□□□□ -0.27
CHD1-202ENST00000414220 TCEA1P23193 301 aaKnown RBP13.34□□□□□ -0.27
CHD1-202ENST00000414220 PPIBP23284 216 aaKnown RBP13.34□□□□□ -0.27
CHD1-202ENST00000414220 MDH1P40925 334 aaKnown RBP13.34□□□□□ -0.27
CHD1-202ENST00000414220 EIF1P41567 113 aaKnown RBP13.34□□□□□ -0.27
CHD1-202ENST00000414220 CDKN2CP42773 168 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 CRATP43155 626 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 ZFP36L2P47974 494 aaKnown RBP13.34□□□□□ -0.27
CHD1-202ENST00000414220 P2RX1P51575 399 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 SUMO3P55854 103 aaPredicted RBP13.34□□□□□ -0.27
CHD1-202ENST00000414220 NUP107P57740 925 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms