RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 DCDC5Q6ZRR9 648 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 MED25Q71SY5 747 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 G2E3Q7L622 706 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 SLC16A9Q7RTY1 509 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 BMP8AQ7Z5Y6 402 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ADIPOR2Q86V24 386 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 PIM3Q86V86 326 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 CIR1Q86X95 450 aaPredicted RBP3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ANGPTL5Q86XS5 388 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 MFSD6LQ8IWD5 586 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.36□□□□□ -1.87
SF3B1-203ENST00000414174 LAS2Q8IYD9 372 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 C1orf87Q8N0U7 546 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 PARP8Q8N3A8 854 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 MTURNQ8N3F0 131 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 Q8N402 240 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 C12orf76Q8N812 135 aaPredicted RBP3.36□□□□□ -1.87
SF3B1-203ENST00000414174 PLA2G15Q8NCC3 412 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 PXT1Q8NFP0 134 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 SEMA6DQ8NFY4 1073 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 OR52H1Q8NGJ2 320 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 OR9G4Q8NGQ1 327 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 MAFAQ8NHW3 353 aaPredicted RBP3.36□□□□□ -1.87
SF3B1-203ENST00000414174 MRAPQ8TCY5 172 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ABHD5Q8WTS1 349 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 U2AF1L4Q8WU68 220 aaKnown RBP3.36□□□□□ -1.87
SF3B1-203ENST00000414174 NAT14Q8WUY8 206 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF480Q8WV37 535 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 NUDCD2Q8WVJ2 157 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ACOT11Q8WXI4 607 aaPredicted RBP3.36□□□□□ -1.87
SF3B1-203ENST00000414174 PIGCQ92535 297 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 NSMAFQ92636 917 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ATOH1Q92858 354 aaPredicted RBP3.36□□□□□ -1.87
SF3B1-203ENST00000414174 SLC35C1Q96A29 364 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 FAM131CQ96AQ9 280 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 TMEM45BQ96B21 275 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 LENG9Q96B70 501 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 PPWD1Q96BP3 646 aaKnown RBP3.36□□□□□ -1.87
SF3B1-203ENST00000414174 FAM136AQ96C01 138 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 CMTM5Q96DZ9 223 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 L3HYPDHQ96EM0 354 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 CDKN2AIPNLQ96HQ2 116 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 AJUBAQ96IF1 538 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 TMEM56Q96MV1 263 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 NOL4LQ96MY1 436 aaPredicted RBP3.36□□□□□ -1.87
SF3B1-203ENST00000414174 OR14A2Q96R54 314 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 STACQ99469 402 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 SERPINI1Q99574 410 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF426Q9BUY5 554 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 TMEM109Q9BVC6 243 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 MND1Q9BWT6 205 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 KATNBL1Q9H079 304 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 PORCNQ9H237 461 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 C1orf198Q9H425 327 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 SLA2Q9H6Q3 261 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 GAREM1Q9H706 876 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 WDR41Q9HAD4 459 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 UGT1A10Q9HAW8 530 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 UGT1A8Q9HAW9 530 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 RAB9BQ9NP90 201 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 FZD3Q9NPG1 666 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 IL1RAPQ9NPH3 570 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 SLC38A7Q9NVC3 462 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 NECAP2Q9NVZ3 263 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 SPHK1Q9NYA1 384 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 PAK5Q9P286 719 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ABI3Q9P2A4 366 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 LRWD1Q9UFC0 647 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 RWDD2AQ9UIY3 292 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 KCNG2Q9UJ96 466 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ELF5Q9UKW6 265 aaPredicted RBP3.36□□□□□ -1.87
SF3B1-203ENST00000414174 PRPF19Q9UMS4 504 aaKnown RBP3.36□□□□□ -1.87
SF3B1-203ENST00000414174 FOXJ3Q9UPW0 622 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 GSTK1Q9Y2Q3 226 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 CMAHPQ9Y471 501 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 TCAF1Q9Y4C2 921 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 POLR3HQ9Y535 204 aaPredicted RBP3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ARL5AQ9Y689 179 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 TMEM56-RWDD3S4R434 201 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 PCSK5Q92824 1860 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF532Q9HCE3 1301 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ARHGEF10O15013 1369 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 CEMIPQ8WUJ3 1361 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ANKRD30BQ9BXX2 1392 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ZFYVE9O95405 1425 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 CLIP1P30622 1438 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 UHRF1BP1Q6BDS2 1440 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 LOC105369274A0A096LPK9 316 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 ST20-MTHFSA0A0A6YYL1 179 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 LOC102723532A0A0G2JNH3 316 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 FAM25AB3EWG3 89 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 FAM25CB3EWG5 89 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 FAM25GB3EWG6 89 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 TRDCB7Z8K6 153 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 C9J4A7 227 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 E7EWF7 191 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 E9PQ18 207 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 H0YIG0 161 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 H3BQF6 201 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 M0QYV0 167 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms