RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 ALDH3A1P30838 453 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 EVI2BP34910 448 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 KRT20P35900 424 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 MAPK12P53778 367 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 ALDH18A1P54886 795 aaKnown RBP8.54□□□□□ -1.04
RFFL-203ENST00000413582 GUCY1A3Q02108 690 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 GALNT1Q10472 559 aaPredicted RBP8.54□□□□□ -1.04
RFFL-203ENST00000413582 GTF2H2Q13888 395 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 PCLAFQ15004 111 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 PFKFB4Q16877 469 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 TMEM249Q2WGJ8 235 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 ZNF628Q5EBL2 1059 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 CCNYL2Q5T2Q4 361 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 LIPMQ5VYY2 423 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 GTF2H2CQ6P1K8 395 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.54□□□□□ -1.04
RFFL-203ENST00000413582 PAGE2Q7Z2X7 111 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 COMMD6Q7Z4G1 85 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 GGNQ86UU5 652 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 OR6Y1Q8NGX8 325 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 ZNF675Q8TD23 568 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 MGARPQ8TDB4 240 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 LRRC8CQ8TDW0 803 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 SMAP2Q8WU79 429 aaPredicted RBP8.54□□□□□ -1.04
RFFL-203ENST00000413582 ZNF75CPQ92670 426 aaPredicted RBP8.54□□□□□ -1.04
RFFL-203ENST00000413582 GFM2Q969S9 779 aaKnown RBP8.54□□□□□ -1.04
RFFL-203ENST00000413582 EFHD2Q96C19 240 aaPredicted RBP8.54□□□□□ -1.04
RFFL-203ENST00000413582 KLHL29Q96CT2 875 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 GMPPAQ96IJ6 420 aaPredicted RBP8.54□□□□□ -1.04
RFFL-203ENST00000413582 ZNF681Q96N22 645 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 PAIP2Q9BPZ3 127 aaKnown RBP8.54□□□□□ -1.04
RFFL-203ENST00000413582 RTN4RQ9BZR6 473 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 AMBRA1Q9C0C7 1298 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 MANSC1Q9H8J5 431 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 IPPKQ9H8X2 491 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 TMEM160Q9NX00 188 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 CPSF2Q9P2I0 782 aaKnown RBP8.54□□□□□ -1.04
RFFL-203ENST00000413582 GDF2Q9UK05 429 aaPredicted RBP8.54□□□□□ -1.04
RFFL-203ENST00000413582 CLEC4AQ9UMR7 237 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 GPR52Q9Y2T5 361 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 TNPO3Q9Y5L0 923 aaKnown RBP8.54□□□□□ -1.04
RFFL-203ENST00000413582 A0A1W2PP18 115 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 A8MT66 165 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 TMEM114B3SHH9 223 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 WIPF1O43516 503 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 DLX3O60479 287 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 NPHS1O60500 1241 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 SIX3O95343 332 aaPredicted RBP8.53□□□□□ -1.04
RFFL-203ENST00000413582 SERPINE1P05121 402 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 NEFHP12036 1026 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 IL11P20809 199 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 IMPDH1P20839 514 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 LSP1P33241 339 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 PNLIPRP2P54317 469 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 CTBP2P56545 445 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 RPS3AP61247 264 aaKnown RBP8.53□□□□□ -1.04
RFFL-203ENST00000413582 PSPHP78330 225 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 SRSF2Q01130 221 aaKnown RBP8.53□□□□□ -1.04
RFFL-203ENST00000413582 FAPQ12884 760 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 STX5Q13190 355 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.53□□□□□ -1.04
RFFL-203ENST00000413582 CTU2Q2VPK5 515 aaKnown RBP8.53□□□□□ -1.04
RFFL-203ENST00000413582 PGGHGQ32M88 737 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 ZNF672Q499Z4 452 aaPredicted RBP8.53□□□□□ -1.04
RFFL-203ENST00000413582 NCMAPQ5T1S8 102 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 FRG2Q64ET8 278 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 SEZ6L2Q6UXD5 910 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 BEND4Q6ZU67 534 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 ATG4DQ86TL0 474 aaPredicted RBP8.53□□□□□ -1.04
RFFL-203ENST00000413582 METTL4Q8N3J2 472 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 PTGR2Q8N8N7 351 aaPredicted RBP8.53□□□□□ -1.04
RFFL-203ENST00000413582 KBTBD8Q8NFY9 601 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 OR4N2Q8NGD1 307 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 OR52B6Q8NGF0 335 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 TRPC4APQ8TEL6 797 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 S100PBPQ96BU1 408 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 L3HYPDHQ96EM0 354 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 C1GALT1C1Q96EU7 318 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 C11orf24Q96F05 449 aaPredicted RBP8.53□□□□□ -1.04
RFFL-203ENST00000413582 HS6ST2Q96MM7 605 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 CDK15Q96Q40 435 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 FRG2BQ96QU4 278 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 TACO1Q9BSH4 297 aaKnown RBP8.53□□□□□ -1.04
RFFL-203ENST00000413582 TRMOQ9BU70 441 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 C1QTNF3Q9BXJ4 246 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 FOLH1BQ9HBA9 442 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 LRTM1Q9HBL6 345 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 BARX1Q9HBU1 254 aaPredicted RBP8.53□□□□□ -1.04
RFFL-203ENST00000413582 FLRT3Q9NZU0 649 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 MED11Q9P086 117 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 METRNQ9UJH8 293 aa8.53□□□□□ -1.04
RFFL-203ENST00000413582 SVEP1Q4LDE5 3571 aa8.52□□□□□ -1.05
RFFL-203ENST00000413582 GMNCA6NCL1 334 aa8.52□□□□□ -1.05
RFFL-203ENST00000413582 SHISA8B8ZZ34 492 aa8.52□□□□□ -1.05
RFFL-203ENST00000413582 C3orf80F5H4A9 247 aa8.52□□□□□ -1.05
RFFL-203ENST00000413582 OR7A17O14581 309 aa8.52□□□□□ -1.05
RFFL-203ENST00000413582 FADS1O60427 444 aa8.52□□□□□ -1.05
RFFL-203ENST00000413582 GUCY1B2O75343 617 aa8.52□□□□□ -1.05
RFFL-203ENST00000413582 GCM2O75603 506 aaPredicted RBP8.52□□□□□ -1.05
RFFL-203ENST00000413582 BCAS2O75934 225 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms