RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 HOXD1Q9GZZ0 328 aa27.94■■■□□ 2.06
CSNK1E-206ENST00000413574 POLE3Q9NRF9 147 aa27.94■■■□□ 2.06
CSNK1E-206ENST00000413574 ALG1L2C9J202 215 aa27.93■■■□□ 2.06
CSNK1E-206ENST00000413574 ANGPTL1O95841 491 aa27.93■■■□□ 2.06
CSNK1E-206ENST00000413574 CDK6Q00534 326 aa27.93■■■□□ 2.06
CSNK1E-206ENST00000413574 PLGLB1Q02325 96 aa27.93■■■□□ 2.06
CSNK1E-206ENST00000413574 CD226Q15762 336 aa27.93■■■□□ 2.06
CSNK1E-206ENST00000413574 INAQ16352 499 aa27.93■■■□□ 2.06
CSNK1E-206ENST00000413574 KLHL26Q53HC5 615 aa27.93■■■□□ 2.06
CSNK1E-206ENST00000413574 AP1ARQ63HQ0 302 aa27.93■■■□□ 2.06
CSNK1E-206ENST00000413574 CALHM3Q86XJ0 350 aa27.93■■■□□ 2.06
CSNK1E-206ENST00000413574 ZZZ3Q8IYH5 903 aa27.93■■■□□ 2.06
CSNK1E-206ENST00000413574 WDSUB1Q8N9V3 476 aa27.93■■■□□ 2.06
CSNK1E-206ENST00000413574 TMEM41AQ96HV5 264 aa27.93■■■□□ 2.06
CSNK1E-206ENST00000413574 ZNF597Q96LX8 424 aa27.93■■■□□ 2.06
CSNK1E-206ENST00000413574 GNRHR2Q96P88 292 aa27.93■■■□□ 2.06
CSNK1E-206ENST00000413574 FREM3P0C091 2139 aa27.93■■■□□ 2.06
CSNK1E-206ENST00000413574 FAM166BA8MTA8 275 aa27.92■■■□□ 2.06
CSNK1E-206ENST00000413574 NME4O00746 187 aa27.92■■■□□ 2.06
CSNK1E-206ENST00000413574 WISP2O76076 250 aa27.92■■■□□ 2.06
CSNK1E-206ENST00000413574 GUSBP08236 651 aa27.92■■■□□ 2.06
CSNK1E-206ENST00000413574 CLK3P49761 638 aaKnown RBP27.92■■■□□ 2.06
CSNK1E-206ENST00000413574 MXRA7P84157 204 aa27.92■■■□□ 2.06
CSNK1E-206ENST00000413574 SCARB2Q14108 478 aa27.92■■■□□ 2.06
CSNK1E-206ENST00000413574 NET1Q7Z628 596 aaPredicted RBP27.92■■■□□ 2.06
CSNK1E-206ENST00000413574 DUSP19Q8WTR2 217 aa27.92■■■□□ 2.06
CSNK1E-206ENST00000413574 ZNF583Q96ND8 569 aa27.92■■■□□ 2.06
CSNK1E-206ENST00000413574 TSPAN10Q9H1Z9 355 aaPredicted RBP27.92■■■□□ 2.06
CSNK1E-206ENST00000413574 ZFP64Q9NPA5 681 aa27.92■■■□□ 2.06
CSNK1E-206ENST00000413574 BOKQ9UMX3 212 aaPredicted RBP27.92■■■□□ 2.06
CSNK1E-206ENST00000413574 L3MBTL1Q9Y468 752 aa27.92■■■□□ 2.06
CSNK1E-206ENST00000413574 C5orf58C9J3I9 102 aa27.92■■■□□ 2.06
CSNK1E-206ENST00000413574 CALB2P22676 271 aa27.92■■■□□ 2.06
CSNK1E-206ENST00000413574 ZNF141Q15928 474 aa27.92■■■□□ 2.06
CSNK1E-206ENST00000413574 ZNF527Q8NB42 609 aa27.92■■■□□ 2.06
CSNK1E-206ENST00000413574 MTHFD2LQ9H903 347 aaPredicted RBP27.92■■■□□ 2.06
CSNK1E-206ENST00000413574 ASF1BQ9NVP2 202 aa27.92■■■□□ 2.06
CSNK1E-206ENST00000413574 CALML5Q9NZT1 146 aa27.92■■■□□ 2.06
CSNK1E-206ENST00000413574 DSPPQ9NZW4 1301 aa27.91■■■□□ 2.06
CSNK1E-206ENST00000413574 C15orf38-AP3S2A0A0A6YYH1 394 aa27.91■■■□□ 2.06
CSNK1E-206ENST00000413574 B2RBV5 119 aa27.91■■■□□ 2.06
CSNK1E-206ENST00000413574 SUV39H1O43463 412 aa27.91■■■□□ 2.06
CSNK1E-206ENST00000413574 NDUFB5O43674 189 aa27.91■■■□□ 2.06
CSNK1E-206ENST00000413574 GMFGO60234 142 aa27.91■■■□□ 2.06
CSNK1E-206ENST00000413574 GLSO94925 669 aaPredicted RBP27.91■■■□□ 2.06
CSNK1E-206ENST00000413574 PGM3O95394 542 aa27.91■■■□□ 2.06
CSNK1E-206ENST00000413574 ZNF630Q2M218 657 aaPredicted RBP27.91■■■□□ 2.06
CSNK1E-206ENST00000413574 TIGD3Q6B0B8 471 aa27.91■■■□□ 2.06
CSNK1E-206ENST00000413574 FAM180AQ6UWF9 173 aa27.91■■■□□ 2.06
CSNK1E-206ENST00000413574 ARPINQ7Z6K5 226 aa27.91■■■□□ 2.06
CSNK1E-206ENST00000413574 IFNEQ86WN2 208 aa27.91■■■□□ 2.06
CSNK1E-206ENST00000413574 OR1J4Q8NGS1 313 aa27.91■■■□□ 2.06
CSNK1E-206ENST00000413574 PPP4R1LQ9P1A2 415 aa27.91■■■□□ 2.06
CSNK1E-206ENST00000413574 DTNAQ9Y4J8 743 aa27.91■■■□□ 2.06
CSNK1E-206ENST00000413574 SNPHO15079 494 aa27.9■■■□□ 2.06
CSNK1E-206ENST00000413574 ZNF24P17028 368 aa27.9■■■□□ 2.06
CSNK1E-206ENST00000413574 AQP1P29972 269 aa27.9■■■□□ 2.06
CSNK1E-206ENST00000413574 PPIAP62937 165 aaKnown RBP27.9■■■□□ 2.06
CSNK1E-206ENST00000413574 GNA13Q14344 377 aa27.9■■■□□ 2.06
CSNK1E-206ENST00000413574 REEP3Q6NUK4 255 aa27.9■■■□□ 2.06
CSNK1E-206ENST00000413574 RINLQ6ZS11 566 aa27.9■■■□□ 2.06
CSNK1E-206ENST00000413574 C11orf65Q8NCR3 313 aa27.9■■■□□ 2.06
CSNK1E-206ENST00000413574 PHOSPHO1Q8TCT1 267 aa27.9■■■□□ 2.06
CSNK1E-206ENST00000413574 PACSIN3Q9UKS6 424 aa27.9■■■□□ 2.06
CSNK1E-206ENST00000413574 A0A0G2JPF8 293 aa27.89■■■□□ 2.06
CSNK1E-206ENST00000413574 A0A1W2PQD3 144 aa27.89■■■□□ 2.06
CSNK1E-206ENST00000413574 CLDN24A6NM45 220 aa27.89■■■□□ 2.06
CSNK1E-206ENST00000413574 EIF4E1BA6NMX2 242 aaKnown RBP27.89■■■□□ 2.06
CSNK1E-206ENST00000413574 HNRNPCL2B2RXH8 293 aa27.89■■■□□ 2.06
CSNK1E-206ENST00000413574 HNRNPCL3B7ZW38 293 aa27.89■■■□□ 2.06
CSNK1E-206ENST00000413574 HNRNPCL1O60812 293 aaKnown RBP27.89■■■□□ 2.06
CSNK1E-206ENST00000413574 HNRNPCL4P0DMR1 293 aa27.89■■■□□ 2.06
CSNK1E-206ENST00000413574 MNAT1P51948 309 aa27.89■■■□□ 2.06
CSNK1E-206ENST00000413574 LIPEQ05469 1076 aa27.89■■■□□ 2.06
CSNK1E-206ENST00000413574 NDUFAF6Q330K2 333 aa27.89■■■□□ 2.06
CSNK1E-206ENST00000413574 TMEM251Q8N6I4 163 aa27.89■■■□□ 2.06
CSNK1E-206ENST00000413574 RBM15BQ8NDT2 890 aaKnown RBP27.89■■■□□ 2.06
CSNK1E-206ENST00000413574 BCL2L10Q9HD36 194 aa27.89■■■□□ 2.06
CSNK1E-206ENST00000413574 MED11Q9P086 117 aa27.89■■■□□ 2.06
CSNK1E-206ENST00000413574 FBXL2Q9UKC9 423 aa27.89■■■□□ 2.06
CSNK1E-206ENST00000413574 AGAP5A6NIR3 686 aa27.89■■■□□ 2.05
CSNK1E-206ENST00000413574 OIP5O43482 229 aa27.89■■■□□ 2.05
CSNK1E-206ENST00000413574 MST1P26927 711 aa27.89■■■□□ 2.05
CSNK1E-206ENST00000413574 CPOXP36551 454 aa27.89■■■□□ 2.05
CSNK1E-206ENST00000413574 MAGEA5P43359 124 aa27.89■■■□□ 2.05
CSNK1E-206ENST00000413574 ALDH6A1Q02252 535 aaKnown RBP27.89■■■□□ 2.05
CSNK1E-206ENST00000413574 PLCZ1Q86YW0 608 aa27.89■■■□□ 2.05
CSNK1E-206ENST00000413574 BBS10Q8TAM1 723 aa27.89■■■□□ 2.05
CSNK1E-206ENST00000413574 SH3YL1Q96HL8 342 aaPredicted RBP27.89■■■□□ 2.05
CSNK1E-206ENST00000413574 SDHAF3Q9NRP4 125 aa27.89■■■□□ 2.05
CSNK1E-206ENST00000413574 SERINC4A6NH21 518 aa27.88■■■□□ 2.05
CSNK1E-206ENST00000413574 B8ZZF3 427 aa27.88■■■□□ 2.05
CSNK1E-206ENST00000413574 RPS4Y1P22090 263 aaKnown RBP27.88■■■□□ 2.05
CSNK1E-206ENST00000413574 RBBP4Q09028 425 aa27.88■■■□□ 2.05
CSNK1E-206ENST00000413574 C17orf67Q0P5P2 114 aa27.88■■■□□ 2.05
CSNK1E-206ENST00000413574 VMACQ2NL98 169 aa27.88■■■□□ 2.05
CSNK1E-206ENST00000413574 VRK2Q86Y07 508 aa27.88■■■□□ 2.05
CSNK1E-206ENST00000413574 PGAM4Q8N0Y7 254 aa27.88■■■□□ 2.05
CSNK1E-206ENST00000413574 METTL25Q8N6Q8 603 aa27.88■■■□□ 2.05
CSNK1E-206ENST00000413574 HIPK4Q8NE63 616 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms