RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 IRF4Q15306 451 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 ZNF362Q5T0B9 420 aaPredicted RBP4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 LIPMQ5VYY2 423 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 MBNL2Q5VZF2 373 aaKnown RBP4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 MFSD14CQ5VZR4 134 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 ZPBP2Q6X784 338 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 OR2G2Q8NGZ5 317 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 ZNF516Q92618 1163 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 HAS2Q92819 552 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 GATA6Q92908 595 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 PGAM5Q96HS1 289 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 KIRREL1Q96J84 757 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 OMDQ99983 421 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 ATG10Q9H0Y0 220 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 DPAGT1Q9H3H5 408 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 MFSD1Q9H3U5 465 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 LIN7CQ9NUP9 197 aaKnown RBP4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 ZNF701Q9NV72 531 aaPredicted RBP4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 NAGKQ9UJ70 344 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 MOKQ9UQ07 419 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 NEU2Q9Y3R4 380 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 ABCC12Q96J65 1359 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 A0A0G2JN53 185 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 TRBV11-1A0A0K0K1C0 115 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 ANKRD61A6NGH8 418 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 MROH6A6NGR9 719 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 CASTOR2A6NHX0 329 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 DUXAA6NLW8 204 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 HIDE1A8MVS5 230 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 SPATA31C2B4DYI2 1134 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 SLC22A3O75751 556 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 UBBP0CG47 229 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 ICAM2P13598 275 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 CSNK2A2P19784 350 aaPredicted RBP4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 TBXA2RP21731 343 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 TACR3P29371 465 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 DDOSTP39656 456 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 MAP2K6P52564 334 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 LBX1P52954 281 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 UBA52P62987 128 aaKnown RBP4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 ZNF91Q05481 1191 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 TNFRSF9Q07011 255 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 EIF2B1Q14232 305 aaKnown RBP4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 GRM4Q14833 912 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 NR0B2Q15466 257 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 XKR4Q5GH76 650 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 B3GNTL1Q67FW5 361 aaPredicted RBP4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 TNFAIP8L2Q6P589 184 aaPredicted RBP4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 FBXL19Q6PCT2 694 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 SERPINA13PQ6UXR4 307 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.95□□□□□ -1.627e-11■■■■■ 33.9
R3HDM1-204ENST00000410054 TMEM179Q6ZVK1 233 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 PLPPR4Q7Z2D5 763 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 VN1R5Q7Z5H4 357 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 PTAR1Q7Z6K3 402 aaPredicted RBP4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 BIVMQ86UB2 503 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 ADGRG3Q86Y34 549 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 SLC35F2Q8IXU6 374 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 SCML4Q8N228 414 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 GPD1LQ8N335 351 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 FAM86B1Q8N7N1 296 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 ST6GALNAC3Q8NDV1 305 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 PLPP5Q8NEB5 264 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 OR1L4Q8NGR5 311 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 LRRC15Q8TF66 581 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 C1orf54Q8WWF1 131 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 FCAMRQ8WWV6 532 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 CNOT9Q92600 299 aaKnown RBP4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 SCMH1Q96GD3 660 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 TMEM109Q9BVC6 243 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 SF3B5Q9BWJ5 86 aaKnown RBP4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 KCNJ16Q9NPI9 418 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 PEMTQ9UBM1 199 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 NKX1-2Q9UD57 310 aaPredicted RBP4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 HACL1Q9UJ83 578 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 HS3ST4Q9Y661 456 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 SYNJ2O15056 1496 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 LOC100509620A0A075B734 347 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 A0A1W2PPK0 400 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 A0A1W2PQL4 384 aaPredicted RBP4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 HYKKA2RU49 373 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 OR2T1O43869 369 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 ZNF780AO75290 641 aaPredicted RBP4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 SLC25A12O75746 678 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 ETHE1O95571 254 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 KLK3P07288 261 aaPredicted RBP4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 H2AFZP0C0S5 128 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 FCER1AP12319 257 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 BCKDHBP21953 392 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 HTR2CP28335 458 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 GPR1P46091 355 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 TOB1P50616 345 aaPredicted RBP4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 SOX10P56693 466 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 ACSM2AQ08AH3 577 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 N4BP2L1Q5TBK1 243 aaPredicted RBP4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 MAP1SQ66K74 1059 aaPredicted RBP4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 ACSM2BQ68CK6 577 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 H3F3CQ6NXT2 135 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 DNAJC24Q6P3W2 148 aa4.95□□□□□ -1.62
R3HDM1-204ENST00000410054 MAMDC4Q6UXC1 1216 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms