RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 PRDM14Q9GZV8 571 aa12.73□□□□□ -0.37
GYPC-203ENST00000409836 DEFB127Q9H1M4 99 aa12.73□□□□□ -0.37
GYPC-203ENST00000409836 SLC6A15Q9H2J7 730 aa12.73□□□□□ -0.37
GYPC-203ENST00000409836 TPT1P8Q9HAU6 139 aa12.73□□□□□ -0.37
GYPC-203ENST00000409836 THUMPD1Q9NXG2 353 aaKnown RBP12.73□□□□□ -0.37
GYPC-203ENST00000409836 SLC25A37Q9NYZ2 338 aa12.73□□□□□ -0.37
GYPC-203ENST00000409836 CCDC167Q9P0B6 97 aa12.73□□□□□ -0.37
GYPC-203ENST00000409836 PPP4R1LQ9P1A2 415 aa12.73□□□□□ -0.37
GYPC-203ENST00000409836 TINAGQ9UJW2 476 aa12.73□□□□□ -0.37
GYPC-203ENST00000409836 ETV2O00321 342 aaPredicted RBP12.72□□□□□ -0.37
GYPC-203ENST00000409836 PRRG2O14669 202 aa12.72□□□□□ -0.37
GYPC-203ENST00000409836 GNB5O14775 395 aa12.72□□□□□ -0.37
GYPC-203ENST00000409836 SCO2O43819 266 aa12.72□□□□□ -0.37
GYPC-203ENST00000409836 CDC40O60508 579 aaKnown RBP eCLIP12.72□□□□□ -0.37
GYPC-203ENST00000409836 ACTL6AO96019 429 aa12.72□□□□□ -0.37
GYPC-203ENST00000409836 CHMP24386 653 aa12.72□□□□□ -0.37
GYPC-203ENST00000409836 PTGER4P35408 488 aa12.72□□□□□ -0.37
GYPC-203ENST00000409836 ARFIP2P53365 341 aa12.72□□□□□ -0.37
GYPC-203ENST00000409836 CASP6P55212 293 aa12.72□□□□□ -0.37
GYPC-203ENST00000409836 DSCR4P56555 118 aaPredicted RBP12.72□□□□□ -0.37
GYPC-203ENST00000409836 PER3P56645 1201 aa12.72□□□□□ -0.37
GYPC-203ENST00000409836 B3GALT5-AS1P59052 145 aa12.72□□□□□ -0.37
GYPC-203ENST00000409836 CD226Q15762 336 aa12.72□□□□□ -0.37
GYPC-203ENST00000409836 GLYR1Q49A26 553 aaPredicted RBP12.72□□□□□ -0.37
GYPC-203ENST00000409836 FLYWCH1Q4VC44 716 aa12.72□□□□□ -0.37
GYPC-203ENST00000409836 AGKQ53H12 422 aa12.72□□□□□ -0.37
GYPC-203ENST00000409836 ATAD3BQ5T9A4 648 aa12.72□□□□□ -0.37
GYPC-203ENST00000409836 TNFAIP8L2Q6P589 184 aaPredicted RBP12.72□□□□□ -0.37
GYPC-203ENST00000409836 SLC2A7Q6PXP3 512 aa12.72□□□□□ -0.37
GYPC-203ENST00000409836 DNAJC14Q6Y2X3 702 aaPredicted RBP12.72□□□□□ -0.37
GYPC-203ENST00000409836 FRRS1Q6ZNA5 592 aa12.72□□□□□ -0.37
GYPC-203ENST00000409836 ZNF621Q6ZSS3 439 aa12.72□□□□□ -0.37
GYPC-203ENST00000409836 CD163Q86VB7 1156 aa12.72□□□□□ -0.37
GYPC-203ENST00000409836 TOR1AIP2Q8NFQ8 470 aa12.72□□□□□ -0.37
GYPC-203ENST00000409836 SSC4DQ8WTU2 575 aa12.72□□□□□ -0.37
GYPC-203ENST00000409836 ROPN1LQ96C74 230 aa12.72□□□□□ -0.37
GYPC-203ENST00000409836 C1GALT1C1Q96EU7 318 aa12.72□□□□□ -0.37
GYPC-203ENST00000409836 SLC38A1Q9H2H9 487 aa12.72□□□□□ -0.37
GYPC-203ENST00000409836 TP63Q9H3D4 680 aaPredicted RBP12.72□□□□□ -0.37
GYPC-203ENST00000409836 SAR1AQ9NR31 198 aa12.72□□□□□ -0.37
GYPC-203ENST00000409836 FAM53CQ9NYF3 392 aa12.72□□□□□ -0.37
GYPC-203ENST00000409836 KCNE5Q9UJ90 142 aa12.72□□□□□ -0.37
GYPC-203ENST00000409836 PCDHB14Q9Y5E9 798 aa12.72□□□□□ -0.37
GYPC-203ENST00000409836 DOCK7Q96N67 2140 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 FIGNL2A6NMB9 653 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 C17orf51A8MQB3 221 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 LINC01387J3KSC0 135 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 SCDO00767 359 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 NDUFB5O43674 189 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 ZIC3O60481 467 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 WDR1O75083 606 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 GSNP06396 782 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 HOXD4P09016 255 aaPredicted RBP12.71□□□□□ -0.37
GYPC-203ENST00000409836 RNF224P0DH78 156 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 OR12D1P0DN82 309 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 CD1EP15812 388 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 ZNF17P17021 662 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 NCF2P19878 526 aaPredicted RBP12.71□□□□□ -0.37
GYPC-203ENST00000409836 AGAP20933 346 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 PPIBP23284 216 aaKnown RBP12.71□□□□□ -0.37
GYPC-203ENST00000409836 LSP1P33241 339 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 MAPK11Q15759 364 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 ZNF630Q2M218 657 aaPredicted RBP12.71□□□□□ -0.37
GYPC-203ENST00000409836 GTDC1Q4AE62 458 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 PAGE3Q5JUK9 113 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 COX20Q5RI15 118 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 C6orf10Q5SRN2 563 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 PRAMEF8Q5VWM4 474 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 C1QL3Q5VWW1 255 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 PRAMEF7Q5VXH5 474 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 TYW3Q6IPR3 259 aaKnown RBP12.71□□□□□ -0.37
GYPC-203ENST00000409836 DLEU7Q6UYE1 221 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 RPTNQ6XPR3 784 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 LRRC74BQ6ZQY2 392 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 C16orf62Q7Z3J2 963 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 GALNT10Q86SR1 603 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 MARCH3Q86UD3 253 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 RAD21L1Q9H4I0 556 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 SUCOQ9UBS9 1254 aaKnown RBP12.71□□□□□ -0.37
GYPC-203ENST00000409836 LEF1Q9UJU2 399 aaPredicted RBP12.71□□□□□ -0.37
GYPC-203ENST00000409836 MEMO1Q9Y316 297 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 DTNAQ9Y4J8 743 aa12.71□□□□□ -0.37
GYPC-203ENST00000409836 A0A087WZY1 265 aa12.7□□□□□ -0.38
GYPC-203ENST00000409836 C2orf72A6NCS6 295 aa12.7□□□□□ -0.38
GYPC-203ENST00000409836 BBIP1A8MTZ0 92 aa12.7□□□□□ -0.38
GYPC-203ENST00000409836 LRRTM2O43300 516 aa12.7□□□□□ -0.38
GYPC-203ENST00000409836 FCMRO60667 390 aa12.7□□□□□ -0.38
GYPC-203ENST00000409836 TNFRSF21O75509 655 aa12.7□□□□□ -0.38
GYPC-203ENST00000409836 UGT2B17O75795 530 aa12.7□□□□□ -0.38
GYPC-203ENST00000409836 AGFG2O95081 481 aa12.7□□□□□ -0.38
GYPC-203ENST00000409836 GABRA1P14867 456 aa12.7□□□□□ -0.38
GYPC-203ENST00000409836 CPN1P15169 458 aa12.7□□□□□ -0.38
GYPC-203ENST00000409836 GPX2P18283 190 aa12.7□□□□□ -0.38
GYPC-203ENST00000409836 DPP4P27487 766 aa12.7□□□□□ -0.38
GYPC-203ENST00000409836 RFX3P48380 749 aa12.7□□□□□ -0.38
GYPC-203ENST00000409836 DLX5P56178 289 aa12.7□□□□□ -0.38
GYPC-203ENST00000409836 PLAURQ03405 335 aa12.7□□□□□ -0.38
GYPC-203ENST00000409836 SKP2Q13309 424 aa12.7□□□□□ -0.38
GYPC-203ENST00000409836 RGNQ15493 299 aa12.7□□□□□ -0.38
GYPC-203ENST00000409836 EIPR1Q53HC9 387 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms