RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 SLC22A20A6NK97 555 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 SCDO00767 359 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 MSTNO14793 375 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 HMGN2P05204 90 aaKnown RBP13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 LAMP1P11279 417 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 CD1EP15812 388 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 CREB1P16220 341 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 ZNF17P17021 662 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 RFX3P48380 749 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 RPL14P50914 215 aaKnown RBP13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 CLDN8P56748 225 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 ABCE1P61221 599 aaKnown RBP13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 POU6F2P78424 691 aaPredicted RBP13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 TP53BP2Q13625 1128 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 TMEM44Q2T9K0 475 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 GRAMD1BQ3KR37 738 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 TNFAIP8L3Q5GJ75 292 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 SZRD1Q7Z422 152 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 P4HA3Q7Z4N8 544 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 EXOC3L1Q86VI1 746 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 ZZZ3Q8IYH5 903 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 COX18Q8N8Q8 333 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 ZNF527Q8NB42 609 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 VPS37AQ8NEZ2 397 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 OR7A2PQ8NGA2 310 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 OR4C3Q8NH37 302 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 CLHC1Q8NHS4 586 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 AGR3Q8TD06 166 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 SFXN5Q8TD22 340 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 ADAMTS15Q8TE58 950 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 INTS12Q96CB8 462 aaKnown RBP13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 C3orf30Q96M34 536 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 DACH2Q96NX9 599 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 POLDIP3Q9BY77 421 aaKnown RBP13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 DNAJB12Q9NXW2 375 aaKnown RBP13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 CRIM1Q9NZV1 1036 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 NDRG3Q9UGV2 375 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 PACSIN3Q9UKS6 424 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 OR2M5A3KFT3 312 aa13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 A6NNC1 897 aa13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 A8MXE2 369 aa13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 KDM4EB2RXH2 506 aaPredicted RBP13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 EEF1E1-BLOC1S5C9J1V9 151 aa13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 H3BNH8 94 aa13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 EEF1E1O43324 174 aaKnown RBP13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 OXSR1O95747 527 aaPredicted RBP13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 IGKV1D-16P01601 117 aa13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 DHRS4L1P0CG22 281 aa13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 ACP2P11117 423 aa13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 FCGR2AP12318 317 aa13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 ATP6V1C1P21283 382 aa13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 EIF1P41567 113 aaKnown RBP13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 WNT3P56703 355 aa13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 PTGR1Q14914 329 aa13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 TESK1Q15569 626 aa13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 DUSP5Q16690 384 aa13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 CDC73Q6P1J9 531 aa13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 APOOLQ6UXV4 268 aa13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 WDR75Q8IWA0 830 aaKnown RBP13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 ZNF775Q96BV0 537 aaPredicted RBP13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 SLC39A3Q9BRY0 314 aa13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 DUSP26Q9BV47 211 aa13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 RBM24Q9BX46 236 aaKnown RBP13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 SIRT3Q9NTG7 399 aaPredicted RBP13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 HAO1Q9UJM8 370 aa13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 PCDHGB4Q9UN71 923 aa13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 SNX8Q9Y5X2 465 aa13.12□□□□□ -0.31
NIF3L1-205ENST00000409588 AK1P00568 194 aa13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 ADH6P28332 368 aa13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 ARRB2P32121 409 aa13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 CPA2P48052 419 aa13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 SLC1A6P48664 564 aa13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 ZNF41P51814 821 aaPredicted RBP13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 SLC18A1P54219 525 aa13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 RAC1P63000 192 aa13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 FOXF2Q12947 444 aa13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 STX5Q13190 355 aa13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 CHI3L2Q15782 390 aa13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 SPDYE7PQ495Y7 208 aa13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 CEP85LQ5SZL2 805 aa13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 PDSS1Q5T2R2 415 aa13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 ANXA8L1Q5VT79 327 aa13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 GTF2IRD2BQ6EKJ0 949 aa13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 GTF2IRD2Q86UP8 949 aa13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 GTPBP8Q8N3Z3 284 aaPredicted RBP13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 METTL25Q8N6Q8 603 aa13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 OR8J2Q8NGG1 315 aa13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 OIT3Q8WWZ8 545 aa13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 C16orf58Q96GQ5 468 aa13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 RTN4RQ9BZR6 473 aa13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 CLEC4MQ9H2X3 399 aaPredicted RBP13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 GLRX2Q9NS18 164 aa13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 ELOVL5Q9NYP7 299 aa13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 FLRT3Q9NZU0 649 aa13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 ITGB1BP2Q9UKP3 347 aa13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 ANKRD17O75179 2603 aaKnown RBP13.11□□□□□ -0.31
NIF3L1-205ENST00000409588 ANKHD1Q8IWZ3 2542 aaKnown RBP13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 POLQO75417 2590 aa13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 A0A1W2PNV4 684 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms