RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 MYL9P24844 172 aa12.52□□□□□ -0.4
COL6A2-204ENST00000409416 PRR5P85299 388 aa12.52□□□□□ -0.4
COL6A2-204ENST00000409416 SAXO2Q658L1 398 aa12.52□□□□□ -0.4
COL6A2-204ENST00000409416 ZNF770Q6IQ21 691 aaPredicted RBP12.52□□□□□ -0.4
COL6A2-204ENST00000409416 SYCE2Q6PIF2 218 aa12.52□□□□□ -0.4
COL6A2-204ENST00000409416 UNC5DQ6UXZ4 953 aa12.52□□□□□ -0.4
COL6A2-204ENST00000409416 UBE2Q1Q7Z7E8 422 aa12.52□□□□□ -0.4
COL6A2-204ENST00000409416 ELMOD2Q8IZ81 293 aa12.52□□□□□ -0.4
COL6A2-204ENST00000409416 NANOGP1Q8N7R0 232 aa12.52□□□□□ -0.4
COL6A2-204ENST00000409416 ZNF557Q8N988 423 aaPredicted RBP12.52□□□□□ -0.4
COL6A2-204ENST00000409416 ASCC1Q8N9N2 400 aaKnown RBP12.52□□□□□ -0.4
COL6A2-204ENST00000409416 OR9A4Q8NGU2 314 aa12.52□□□□□ -0.4
COL6A2-204ENST00000409416 OR6F1Q8NGZ6 308 aa12.52□□□□□ -0.4
COL6A2-204ENST00000409416 UFD1Q92890 307 aa12.52□□□□□ -0.4
COL6A2-204ENST00000409416 NXF2Q9GZY0 626 aaKnown RBP12.52□□□□□ -0.4
COL6A2-204ENST00000409416 SERHL2Q9H4I8 314 aa12.52□□□□□ -0.4
COL6A2-204ENST00000409416 APOBEC3BQ9UH17 382 aaKnown RBP12.52□□□□□ -0.4
COL6A2-204ENST00000409416 FAM240BA0A1B0GVZ2 78 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 A0A1W2PRG6 482 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 SOCS6O14544 535 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 CRYZL1O95825 349 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 SLC2A2P11168 524 aaPredicted RBP12.52□□□□□ -0.41
COL6A2-204ENST00000409416 RFX2P48378 723 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 SMSP52788 366 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 HMGA2P52926 109 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 FAM27D1Q5T7N8 215 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 PRICKLE2Q7Z3G6 844 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 CPOQ8IVL8 374 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 OR2A1Q8NGT9 310 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 CCDC86Q9H6F5 360 aaKnown RBP12.52□□□□□ -0.41
COL6A2-204ENST00000409416 ZNF624Q9P2J8 865 aaPredicted RBP12.52□□□□□ -0.41
COL6A2-204ENST00000409416 HYKKA2RU49 373 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 SMLR1H3BR10 107 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 ICMTO60725 284 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 COL9A1P20849 921 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 IGFALSP35858 605 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 RPE65Q16518 533 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 CCDC58Q4VC31 144 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 TMEM196Q5HYL7 178 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 RPTNQ6XPR3 784 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 BPHLQ86WA6 291 aaPredicted RBP12.52□□□□□ -0.41
COL6A2-204ENST00000409416 IZUMO1Q8IYV9 350 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 OR7G1Q8NGA0 311 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 AMDHD1Q96NU7 426 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 SLC38A2Q96QD8 506 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 OR2M4Q96R27 311 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 WACQ9BTA9 647 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 SAP130Q9H0E3 1048 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 RPRD1BQ9NQG5 326 aaKnown RBP12.52□□□□□ -0.41
COL6A2-204ENST00000409416 NLKQ9UBE8 527 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 V9GYH0 126 aa12.52□□□□□ -0.41
COL6A2-204ENST00000409416 BLOC1S5-TXNDC5H3BN57 136 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 CLUP10909 449 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 TLX1P31314 330 aaPredicted RBP12.51□□□□□ -0.41
COL6A2-204ENST00000409416 BSGP35613 385 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 GCGRP47871 477 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 MTNR1AP48039 350 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 LIMS1P48059 325 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 AGBL4Q5VU57 503 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 SLC27A4Q6P1M0 643 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 IKBIPQ70UQ0 350 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 PROKR2Q8NFJ6 384 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 NRSN2Q9GZP1 204 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 FN3KQ9H479 309 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 PNO1Q9NRX1 252 aaKnown RBP12.51□□□□□ -0.41
COL6A2-204ENST00000409416 CA14Q9ULX7 337 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 A4GNTQ9UNA3 340 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 PRAMEF27A3QJZ7 478 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 VEGFDO43915 354 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 APEHP13798 732 aaKnown RBP12.51□□□□□ -0.41
COL6A2-204ENST00000409416 DDX6P26196 483 aaKnown RBP eCLIP12.51□□□□□ -0.41
COL6A2-204ENST00000409416 MAZP56270 477 aaKnown RBP12.51□□□□□ -0.41
COL6A2-204ENST00000409416 WNT4P56705 351 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 SQSTM1Q13501 440 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 C1orf189Q5VU69 101 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 MEDAGQ5VYS4 303 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 Q6ZSR6 202 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 ARL14Q8N4G2 192 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 NATD1Q8N6N6 113 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 PCNPQ8WW12 178 aaKnown RBP12.51□□□□□ -0.41
COL6A2-204ENST00000409416 FRMD6Q96NE9 622 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 OR7D2Q96RA2 312 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 SRRQ9GZT4 340 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 TRIM45Q9H8W5 580 aaPredicted RBP12.51□□□□□ -0.41
COL6A2-204ENST00000409416 SLC25A19Q9HC21 320 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 SIRT3Q9NTG7 399 aaPredicted RBP12.51□□□□□ -0.41
COL6A2-204ENST00000409416 MSRAQ9UJ68 235 aa12.51□□□□□ -0.41
COL6A2-204ENST00000409416 MDC1Q14676 2089 aaKnown RBP12.51□□□□□ -0.41
COL6A2-204ENST00000409416 IQCMA0A1B0GVH7 501 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 LRIT2A6NDA9 550 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 DVL2O14641 736 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 HCN1O60741 890 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 OR5F1O95221 314 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 RPS21P63220 83 aaKnown RBP12.5□□□□□ -0.41
COL6A2-204ENST00000409416 MLLT11Q13015 90 aaPredicted RBP12.5□□□□□ -0.41
COL6A2-204ENST00000409416 CNIH2Q6PI25 160 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 Q8N402 240 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 ANKK1Q8NFD2 765 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 OR2L3Q8NG85 312 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 RBM18Q96H35 190 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms