RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 MAD2L1Q13257 205 aaPredicted RBP5.1□□□□□ -1.59
CLK1-202ENST00000409403 GRB7Q14451 532 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 EMC2Q15006 297 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 PAFAH1B3Q15102 231 aaKnown RBP5.1□□□□□ -1.59
CLK1-202ENST00000409403 PTPRRQ15256 657 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 ETFDHQ16134 617 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 TSTQ16762 297 aaKnown RBP5.1□□□□□ -1.59
CLK1-202ENST00000409403 TCTN1Q2MV58 587 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 ZNF667Q5HYK9 610 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 PAGE3Q5JUK9 113 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 MEDAGQ5VYS4 303 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 KIAA0930Q6ICG6 404 aaPredicted RBP5.1□□□□□ -1.59
CLK1-202ENST00000409403 ZNF425Q6IV72 752 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 CDC42EP5Q6NZY7 148 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 FAHD1Q6P587 224 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 FAM198BQ6UWH4 519 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 ENPP6Q6UWR7 440 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 DET1Q7L5Y6 550 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 KRT77Q7Z794 578 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 GALNT5Q7Z7M9 940 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 MRGPREQ86SM8 312 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 MOGAT3Q86VF5 341 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 TMEM17Q86X19 198 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 ENTHD1Q8IYW4 607 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 SLC34A3Q8N130 599 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 ZNF567Q8N184 647 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 Q8N402 240 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 LIX1Q8N485 282 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 UXS1Q8NBZ7 420 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 CCNYQ8ND76 341 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 OR2T4Q8NH00 348 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 CLHC1Q8NHS4 586 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 SCAMP5Q8TAC9 235 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 CHURC1Q8WUH1 139 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 GGHQ92820 318 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 DNASE1L2Q92874 299 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 SLC25A46Q96AG3 418 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 RHBDF1Q96CC6 855 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 ART5Q96L15 291 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 C3orf30Q96M34 536 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 Q96MF0 132 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 COQ10AQ96MF6 247 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 LINC00052Q96N35 136 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 ZNF285Q96NJ3 590 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 DNTTIP1Q9H147 329 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 GHITMQ9H3K2 345 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 REEP1Q9H902 201 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 POPDC3Q9HBV1 291 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 MID1IP1Q9NPA3 183 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 EXOSC4Q9NPD3 245 aaKnown RBP5.1□□□□□ -1.59
CLK1-202ENST00000409403 EQTNQ9NQ60 294 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 RASSF1Q9NS23 344 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 GPATCH2LQ9NWQ4 482 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 IMPAD1Q9NX62 359 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 SH3BP4Q9P0V3 963 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 HCN3Q9P1Z3 774 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 ZNF222Q9UK12 451 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 AAR2Q9Y312 384 aaKnown RBP5.1□□□□□ -1.59
CLK1-202ENST00000409403 TSC2P49815 1807 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 DENND4AQ7Z401 1863 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 KIAA1217Q5T5P2 1943 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 COL5A1P20908 1838 aaPredicted RBP5.09□□□□□ -1.59
CLK1-202ENST00000409403 A8MVJ9 347 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 ARHGEF33A8MVX0 844 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 VWC2LB2RUY7 222 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 E9PQ18 207 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 SLC28A1O00337 649 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 SULT1C2O00338 296 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 SLC19A2O60779 497 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 PMPCBO75439 489 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 CREG1O75629 220 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 NXPH3O95157 252 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 CCNDBP1O95273 360 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 FABP3P05413 133 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 CHRM2P08172 466 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 HSMCR30P0CW71 290 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 UROSP10746 265 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 CYP4B1P13584 511 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 TSPAN8P19075 237 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 DNASE1P24855 282 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 LCN1P31025 176 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 CAPZA2P47755 286 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 DAPP51397 102 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 TAS2R39P59534 338 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 CDC42P60953 191 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 RAB4BP61018 213 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 DGCR2P98153 550 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 ZNF33AQ06730 810 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 FOXE3Q13461 319 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 LPAL2Q16609 132 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 GTDC1Q4AE62 458 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 UNC50Q53HI1 259 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 XKR7Q5GH72 579 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 PDSS1Q5T2R2 415 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 KCTD11Q693B1 232 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 PYHIN1Q6K0P9 492 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 LCLAT1Q6UWP7 414 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 C5orf46Q6UWT4 87 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 DLEU7Q6UYE1 221 aa5.09□□□□□ -1.59
CLK1-202ENST00000409403 CYHR1Q6ZMK1 362 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms