RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 BRF2Q9HAW0 419 aa14.8□□□□□ -0.04
CHMP3-203ENST00000409225 Q9N2J8 555 aa14.8□□□□□ -0.04
CHMP3-203ENST00000409225 SLC35C2Q9NQQ7 365 aa14.8□□□□□ -0.04
CHMP3-203ENST00000409225 NMRK1Q9NWW6 199 aa14.8□□□□□ -0.04
CHMP3-203ENST00000409225 KCNS2Q9ULS6 477 aa14.8□□□□□ -0.04
CHMP3-203ENST00000409225 ABCD4O14678 606 aa14.79□□□□□ -0.04
CHMP3-203ENST00000409225 EIF3HO15372 352 aaKnown RBP eCLIP14.79□□□□□ -0.04
CHMP3-203ENST00000409225 GSTA2P09210 222 aa14.79□□□□□ -0.04
CHMP3-203ENST00000409225 ME2P23368 584 aa14.79□□□□□ -0.04
CHMP3-203ENST00000409225 CARD18P57730 90 aa14.79□□□□□ -0.04
CHMP3-203ENST00000409225 MRPS25P82663 173 aaKnown RBP14.79□□□□□ -0.04
CHMP3-203ENST00000409225 CSTF3Q12996 717 aaKnown RBP14.79□□□□□ -0.04
CHMP3-203ENST00000409225 PPA1Q15181 289 aa14.79□□□□□ -0.04
CHMP3-203ENST00000409225 RAB35Q15286 201 aa14.79□□□□□ -0.04
CHMP3-203ENST00000409225 GRAMD1BQ3KR37 738 aa14.79□□□□□ -0.04
CHMP3-203ENST00000409225 TECRLQ5HYJ1 363 aa14.79□□□□□ -0.04
CHMP3-203ENST00000409225 FAM120AOSQ5T036 256 aa14.79□□□□□ -0.04
CHMP3-203ENST00000409225 LIPNQ5VXI9 398 aa14.79□□□□□ -0.04
CHMP3-203ENST00000409225 C11orf71Q6IPW1 123 aa14.79□□□□□ -0.04
CHMP3-203ENST00000409225 CCDC91Q7Z6B0 441 aa14.79□□□□□ -0.04
CHMP3-203ENST00000409225 FBF1Q8TES7 1133 aa14.79□□□□□ -0.04
CHMP3-203ENST00000409225 MRRFQ96E11 262 aaKnown RBP14.79□□□□□ -0.04
CHMP3-203ENST00000409225 REXO5Q96IC2 774 aaKnown RBP14.79□□□□□ -0.04
CHMP3-203ENST00000409225 BBS4Q96RK4 519 aa14.79□□□□□ -0.04
CHMP3-203ENST00000409225 PLA2G12AQ9BZM1 189 aa14.79□□□□□ -0.04
CHMP3-203ENST00000409225 DPH5Q9H2P9 285 aa14.79□□□□□ -0.04
CHMP3-203ENST00000409225 RNF14Q9UBS8 474 aa14.79□□□□□ -0.04
CHMP3-203ENST00000409225 MCM8Q9UJA3 840 aa14.79□□□□□ -0.04
CHMP3-203ENST00000409225 MRTO4Q9UKD2 239 aaKnown RBP14.79□□□□□ -0.04
CHMP3-203ENST00000409225 A0A087WZY1 265 aa14.78□□□□□ -0.04
CHMP3-203ENST00000409225 A0A096LPK6 155 aa14.78□□□□□ -0.04
CHMP3-203ENST00000409225 GNG14A0A1W2PPG7 69 aa14.78□□□□□ -0.04
CHMP3-203ENST00000409225 SLC35F4A4IF30 521 aa14.78□□□□□ -0.04
CHMP3-203ENST00000409225 PPP6CO00743 305 aa14.78□□□□□ -0.04
CHMP3-203ENST00000409225 PCDH7O60245 1069 aa14.78□□□□□ -0.04
CHMP3-203ENST00000409225 LYZL6O75951 148 aa14.78□□□□□ -0.04
CHMP3-203ENST00000409225 PABPC4LP0CB38 370 aaKnown RBP14.78□□□□□ -0.04
CHMP3-203ENST00000409225 TSPAN8P19075 237 aa14.78□□□□□ -0.04
CHMP3-203ENST00000409225 USF1P22415 310 aaPredicted RBP14.78□□□□□ -0.04
CHMP3-203ENST00000409225 MPIP34949 423 aa14.78□□□□□ -0.04
CHMP3-203ENST00000409225 PSMD4P55036 377 aaKnown RBP14.78□□□□□ -0.04
CHMP3-203ENST00000409225 LSM11P83369 360 aaKnown RBP eCLIP14.78□□□□□ -0.047e-8■□□□□ 11.1
CHMP3-203ENST00000409225 PRR5P85299 388 aa14.78□□□□□ -0.04
CHMP3-203ENST00000409225 ITGADQ13349 1161 aa14.78□□□□□ -0.04
CHMP3-203ENST00000409225 P2RY6Q15077 328 aa14.78□□□□□ -0.04
CHMP3-203ENST00000409225 ZNF239Q16600 458 aaKnown RBP14.78□□□□□ -0.04
CHMP3-203ENST00000409225 FAM166AQ6J272 317 aa14.78□□□□□ -0.04
CHMP3-203ENST00000409225 LETMD1Q6P1Q0 360 aa14.78□□□□□ -0.04
CHMP3-203ENST00000409225 TMEM107Q6UX40 140 aa14.78□□□□□ -0.04
CHMP3-203ENST00000409225 OR2W6PQ8NHA6 318 aa14.78□□□□□ -0.04
CHMP3-203ENST00000409225 RNF128Q8TEB7 428 aa14.78□□□□□ -0.04
CHMP3-203ENST00000409225 C10orf105Q8TEF2 133 aa14.78□□□□□ -0.04
CHMP3-203ENST00000409225 CBLN4Q9NTU7 201 aa14.78□□□□□ -0.04
CHMP3-203ENST00000409225 KLHL13Q9P2N7 655 aa14.78□□□□□ -0.04
CHMP3-203ENST00000409225 VPS29Q9UBQ0 182 aa14.78□□□□□ -0.04
CHMP3-203ENST00000409225 SNX6Q9UNH7 406 aa14.78□□□□□ -0.04
CHMP3-203ENST00000409225 FREM1Q5H8C1 2179 aa14.78□□□□□ -0.04
CHMP3-203ENST00000409225 MALRD1Q5VYJ5 2156 aa14.78□□□□□ -0.04
CHMP3-203ENST00000409225 A0A1W2PRB8 838 aa14.77□□□□□ -0.05
CHMP3-203ENST00000409225 ZNF814B7Z6K7 855 aa14.77□□□□□ -0.05
CHMP3-203ENST00000409225 SPRY1O43609 319 aaPredicted RBP14.77□□□□□ -0.05
CHMP3-203ENST00000409225 JUNP05412 331 aaKnown RBP14.77□□□□□ -0.05
CHMP3-203ENST00000409225 PGRP06401 933 aa14.77□□□□□ -0.05
CHMP3-203ENST00000409225 TCP1P17987 556 aaKnown RBP14.77□□□□□ -0.05
CHMP3-203ENST00000409225 HNF1AP20823 631 aa14.77□□□□□ -0.05
CHMP3-203ENST00000409225 PSMA4P25789 261 aaKnown RBP14.77□□□□□ -0.05
CHMP3-203ENST00000409225 SHC1P29353 583 aa14.77□□□□□ -0.05
CHMP3-203ENST00000409225 TTKP33981 857 aa14.77□□□□□ -0.05
CHMP3-203ENST00000409225 SFTPDP35247 375 aa14.77□□□□□ -0.05
CHMP3-203ENST00000409225 GZMKP49863 264 aa14.77□□□□□ -0.05
CHMP3-203ENST00000409225 ZNF41P51814 821 aaPredicted RBP14.77□□□□□ -0.05
CHMP3-203ENST00000409225 NCBP2P52298 156 aaKnown RBP eCLIP14.77□□□□□ -0.051e-8■□□□□ 11.3
CHMP3-203ENST00000409225 RAE1P78406 368 aaKnown RBP14.77□□□□□ -0.05
CHMP3-203ENST00000409225 CALCOCO2Q13137 446 aa14.77□□□□□ -0.05
CHMP3-203ENST00000409225 RNPS1Q15287 305 aaKnown RBP14.77□□□□□ -0.05
CHMP3-203ENST00000409225 ZNHIT3Q15649 155 aaPredicted RBP14.77□□□□□ -0.05
CHMP3-203ENST00000409225 TCHHL1Q5QJ38 904 aaPredicted RBP14.77□□□□□ -0.05
CHMP3-203ENST00000409225 CPTPQ5TA50 214 aa14.77□□□□□ -0.05
CHMP3-203ENST00000409225 CDYL2Q8N8U2 506 aa14.77□□□□□ -0.05
CHMP3-203ENST00000409225 GATSQ8NAP1 163 aa14.77□□□□□ -0.05
CHMP3-203ENST00000409225 C16orf78Q8WTQ4 265 aa14.77□□□□□ -0.05
CHMP3-203ENST00000409225 ZBTB8AQ96BR9 441 aa14.77□□□□□ -0.05
CHMP3-203ENST00000409225 KLHL15Q96M94 604 aa14.77□□□□□ -0.05
CHMP3-203ENST00000409225 USB1Q9BQ65 265 aaKnown RBP14.77□□□□□ -0.05
CHMP3-203ENST00000409225 SRXN1Q9BYN0 137 aa14.77□□□□□ -0.05
CHMP3-203ENST00000409225 VPS11Q9H270 941 aa14.77□□□□□ -0.05
CHMP3-203ENST00000409225 MED17Q9NVC6 651 aa14.77□□□□□ -0.05
CHMP3-203ENST00000409225 NPAP1Q9NZP6 1156 aa14.77□□□□□ -0.05
CHMP3-203ENST00000409225 DMGDHQ9UI17 866 aaKnown RBP14.77□□□□□ -0.05
CHMP3-203ENST00000409225 C19orf53Q9UNZ5 99 aaPredicted RBP14.77□□□□□ -0.05
CHMP3-203ENST00000409225 A0A087WV62 115 aa14.76□□□□□ -0.05
CHMP3-203ENST00000409225 LOC100289279A0A1B0GTE1 492 aa14.76□□□□□ -0.05
CHMP3-203ENST00000409225 GXYLT2A0PJZ3 443 aa14.76□□□□□ -0.05
CHMP3-203ENST00000409225 HMX2A2RU54 273 aa14.76□□□□□ -0.05
CHMP3-203ENST00000409225 E7EQL1 145 aa14.76□□□□□ -0.05
CHMP3-203ENST00000409225 STX16-NPEPL1H3BU86 382 aa14.76□□□□□ -0.05
CHMP3-203ENST00000409225 STX16O14662 325 aa14.76□□□□□ -0.05
CHMP3-203ENST00000409225 OTCP00480 354 aa14.76□□□□□ -0.05
CHMP3-203ENST00000409225 IGKV1D-16P01601 117 aa14.76□□□□□ -0.05
CHMP3-203ENST00000409225 COL6A2P12110 1019 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms