RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 DHFRP00374 187 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 SRPRAP08240 638 aaKnown RBP7.79□□□□□ -1.16
SNX13-201ENST00000409076 CSNK2A2P19784 350 aaPredicted RBP7.79□□□□□ -1.16
SNX13-201ENST00000409076 EDNRAP25101 427 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 RAB33AQ14088 237 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 KLHL22Q53GT1 634 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 TRMT12Q53H54 448 aaKnown RBP7.79□□□□□ -1.16
SNX13-201ENST00000409076 OR4C11Q6IEV9 310 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 CCSAPQ6IQ19 270 aaPredicted RBP7.79□□□□□ -1.16
SNX13-201ENST00000409076 TMEM64Q6YI46 380 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 CBARPQ8N350 705 aaPredicted RBP7.79□□□□□ -1.16
SNX13-201ENST00000409076 LNX2Q8N448 690 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 FTMTQ8N4E7 242 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 NAXEQ8NCW5 288 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 OR52E2Q8NGJ4 325 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 OR5M3Q8NGP4 307 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 OR56A3Q8NH54 315 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 OR5P2Q8WZ92 322 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 RFT1Q96AA3 541 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 OR7D2Q96RA2 312 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 KXD1Q9BQD3 176 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 RSPO3Q9BXY4 272 aaPredicted RBP7.79□□□□□ -1.16
SNX13-201ENST00000409076 ULBP3Q9BZM4 244 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 SLC28A3Q9HAS3 691 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 PLEKHB1Q9UF11 243 aaPredicted RBP7.79□□□□□ -1.16
SNX13-201ENST00000409076 SERGEFQ9UGK8 458 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 CDV3Q9UKY7 258 aaKnown RBP7.79□□□□□ -1.16
SNX13-201ENST00000409076 PCDHGB1Q9Y5G3 927 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 PRRC2CQ9Y520 2896 aaKnown RBP7.79□□□□□ -1.16
SNX13-201ENST00000409076 A0A1B0GTH9 108 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 ALDOBP05062 364 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 ZNF888P0CJ79 500 aaPredicted RBP7.79□□□□□ -1.16
SNX13-201ENST00000409076 NAT1P18440 290 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 CXCL3P19876 107 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 MAOBP27338 520 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 UGT2B10P36537 528 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 KHKP50053 298 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 TAS2R38P59533 333 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 SNRPNP63162 240 aaKnown RBP7.79□□□□□ -1.16
SNX13-201ENST00000409076 ADAM15Q13444 863 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 ZNF234Q14588 700 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 ALKAL2Q6UX46 152 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 CDK20Q8IZL9 346 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 RFLNBQ8N5W9 214 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 OR4Q3Q8NH05 313 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 AKAP1Q92667 903 aaKnown RBP eCLIP7.79□□□□□ -1.16
SNX13-201ENST00000409076 UBE2E3Q969T4 207 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 LRRC3BQ96PB8 259 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 ERMAPQ96PL5 475 aaPredicted RBP7.79□□□□□ -1.16
SNX13-201ENST00000409076 CHST8Q9H2A9 424 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 KCNK15Q9H427 330 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 WDR26Q9H7D7 661 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 SYNDIG1Q9H7V2 258 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 C20orf141Q9NUB4 165 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 DKK3Q9UBP4 350 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 OR10H1Q9Y4A9 318 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 KLK4Q9Y5K2 254 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 A0A1W2PR48 441 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 SLC9B1P1A6NJY1 282 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 CACNB4O00305 520 aaPredicted RBP7.79□□□□□ -1.16
SNX13-201ENST00000409076 CDC42EP2O14613 210 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 UBXN7O94888 489 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 PLATP00750 562 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 HLA-DPB1P04440 258 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 HSD3B1P14060 373 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 NPR2P20594 1047 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 DNASE1P24855 282 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 GABRA3P34903 492 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 BCL6P41182 706 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 KCNJ5P48544 419 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 GPR176Q14439 515 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 DEFB115Q30KQ5 88 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 GGTA1PQ4G0N0 100 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 CCDC157Q569K6 752 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 ZDHHC20Q5W0Z9 365 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 RASSF6Q6ZTQ3 369 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 PRSS41Q7RTY9 318 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 DCUN1D3Q8IWE4 304 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 RDH10Q8IZV5 341 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 CPA6Q8N4T0 437 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 MEIOBQ8N635 442 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 OR7G1Q8NGA0 311 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 SLC25A46Q96AG3 418 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 CXorf40BQ96DE9 158 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 CHFRQ96EP1 664 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 CNRIP1Q96F85 164 aaPredicted RBP7.79□□□□□ -1.16
SNX13-201ENST00000409076 DTD2Q96FN9 168 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 SLC41A3Q96GZ6 507 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 MNTQ99583 582 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 ELF4Q99607 663 aaPredicted RBP7.79□□□□□ -1.16
SNX13-201ENST00000409076 RPS6KB2Q9UBS0 482 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 A4GNTQ9UNA3 340 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 HS3ST2Q9Y278 367 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 TMEM5Q9Y2B1 443 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 SIRT4Q9Y6E7 314 aaPredicted RBP7.79□□□□□ -1.16
SNX13-201ENST00000409076 VPS13AQ96RL7 3174 aa7.79□□□□□ -1.16
SNX13-201ENST00000409076 SPTBN2O15020 2390 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 A0A087WV48 116 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 C11orf98E9PRG8 122 aa7.78□□□□□ -1.16
SNX13-201ENST00000409076 OPN1LWP04000 364 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms