RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 C16orf58Q96GQ5 468 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 MARK4Q96L34 752 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 ZFP3Q96NJ6 502 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 ZNF607Q96SK3 696 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 TACO1Q9BSH4 297 aaKnown RBP6.87□□□□□ -1.31
USP16-204ENST00000399976 PRDM14Q9GZV8 571 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 PCDHAC1Q9H158 963 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 PTGES2Q9H7Z7 377 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 METTL7AQ9H8H3 244 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 WDR45Q9Y484 360 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 GXYLT2A0PJZ3 443 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 SERINC4A6NH21 518 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 UNC5CO95185 931 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 SLC6A2P23975 617 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 ALDH6A1Q02252 535 aaKnown RBP6.87□□□□□ -1.31
USP16-204ENST00000399976 OC90Q02509 493 aaPredicted RBP6.87□□□□□ -1.31
USP16-204ENST00000399976 UBAP2LQ14157 1087 aaKnown RBP6.87□□□□□ -1.31
USP16-204ENST00000399976 INPP5JQ15735 1006 aaPredicted RBP6.87□□□□□ -1.31
USP16-204ENST00000399976 NADK2Q4G0N4 442 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 NANOGP8Q6NSW7 305 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 ZZZ3Q8IYH5 903 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 SIMC1Q8NDZ2 872 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 RMND5BQ96G75 393 aaPredicted RBP6.87□□□□□ -1.31
USP16-204ENST00000399976 MRGPRX4Q96LA9 322 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 MMADHCQ9H3L0 296 aaPredicted RBP6.87□□□□□ -1.31
USP16-204ENST00000399976 NANOGQ9H9S0 305 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 GP6Q9HCN6 339 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 SLC6A13Q9NSD5 602 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 DEPPQ9NTK1 212 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 TUBA8Q9NY65 449 aaPredicted RBP6.87□□□□□ -1.31
USP16-204ENST00000399976 STOML1Q9UBI4 398 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 PRAMEF27A3QJZ7 478 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 SERPINB7O75635 380 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 UGT2B17O75795 530 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 STSP08842 583 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 THRBP10828 461 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 UQCRBP14927 111 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 ZNF24P17028 368 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 BNIP2Q12982 314 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 SKP2Q13309 424 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 LARS2Q15031 903 aaKnown RBP6.86□□□□□ -1.31
USP16-204ENST00000399976 VMACQ2NL98 169 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 MMEL1Q495T6 779 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 FLYWCH1Q4VC44 716 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 SPINK14Q6IE38 97 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 TRILQ7L0X0 811 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 EIF3MQ7L2H7 374 aaKnown RBP6.86□□□□□ -1.31
USP16-204ENST00000399976 ZNF550Q7Z398 422 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 GALNTL5Q7Z4T8 443 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 MDGA2Q7Z553 956 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 PTOV1Q86YD1 416 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 TREML1Q86YW5 311 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 GTPBP8Q8N3Z3 284 aaPredicted RBP6.86□□□□□ -1.31
USP16-204ENST00000399976 WDSUB1Q8N9V3 476 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 NEIL3Q8TAT5 605 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 SLC25A43Q8WUT9 341 aaPredicted RBP6.86□□□□□ -1.31
USP16-204ENST00000399976 SLC38A5Q8WUX1 472 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 WDR60Q8WVS4 1066 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 SLC9A6Q92581 669 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 RNF31Q96EP0 1072 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 C1GALT1C1Q96EU7 318 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 BBC3Q96PG8 261 aaPredicted RBP6.86□□□□□ -1.31
USP16-204ENST00000399976 CACYBPQ9HB71 228 aaKnown RBP6.86□□□□□ -1.31
USP16-204ENST00000399976 SPAG4Q9NPE6 437 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 ICAM5Q9UMF0 924 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 NTNG1Q9Y2I2 539 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 L3MBTL1Q9Y468 752 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 ZNF264O43296 627 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 WDR1O75083 606 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 PABPC4LP0CB38 370 aaKnown RBP6.86□□□□□ -1.31
USP16-204ENST00000399976 OR12D1P0DN82 309 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 GABRA1P14867 456 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 GFRA1P56159 465 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 CDK6Q00534 326 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 CBFBQ13951 182 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 C6orf10Q5SRN2 563 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 ATCAYQ86WG3 371 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 LSMEM1Q8N8F7 131 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 CATSPER1Q8NEC5 780 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 OR5W2Q8NH69 310 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 CPT1CQ8TCG5 803 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 ZPLD1Q8TCW7 415 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 TMEM234Q8WY98 164 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 NSL1Q96IY1 281 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 TAAR6Q96RI8 345 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 ADOQ96SZ5 270 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 DOHHQ9BU89 302 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 TBL1XR1Q9BZK7 514 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 GORASP2Q9H8Y8 452 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 ACER3Q9NUN7 267 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 PPP4R1LQ9P1A2 415 aa6.86□□□□□ -1.31
USP16-204ENST00000399976 TESQ9UGI8 421 aaKnown RBP6.86□□□□□ -1.31
USP16-204ENST00000399976 CDHR4A6H8M9 788 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 CDC40O60508 579 aaKnown RBP eCLIP6.85□□□□□ -1.31
USP16-204ENST00000399976 ZIC2O95409 532 aaPredicted RBP6.85□□□□□ -1.31
USP16-204ENST00000399976 H6PDO95479 791 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 CBX6O95503 412 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 ANGPTL1O95841 491 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 CHRM4P08173 479 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 UBL4AP11441 157 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms