RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 NET1Q7Z628 596 aaPredicted RBP8.2□□□□□ -1.1
BRCC3-206ENST00000399042 MARCH3Q86UD3 253 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 CALHM3Q86XJ0 350 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 PTOV1Q86YD1 416 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 ULK2Q8IYT8 1036 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 C10orf111Q8N326 155 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 SMYD1Q8NB12 490 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 GOLM1Q8NBJ4 401 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 TMEM178AQ8NBL3 297 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 FAM98AQ8NCA5 519 aaKnown RBP8.2□□□□□ -1.1
BRCC3-206ENST00000399042 BHLHE22Q8NFJ8 381 aaPredicted RBP8.2□□□□□ -1.1
BRCC3-206ENST00000399042 OR4K17Q8NGC6 315 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 WDR60Q8WVS4 1066 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 RASSF5Q8WWW0 418 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 PROX1Q92786 737 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 HAS2Q92819 552 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 HOXB13Q92826 284 aaPredicted RBP8.2□□□□□ -1.1
BRCC3-206ENST00000399042 PMM1Q92871 262 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 DTNBP1Q96EV8 351 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 CRELD1Q96HD1 420 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 NSMCE2Q96MF7 247 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 SMAD5Q99717 465 aaKnown RBP8.2□□□□□ -1.1
BRCC3-206ENST00000399042 DOHHQ9BU89 302 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 OSBPL11Q9BXB4 747 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 CADM1Q9BY67 442 aaKnown RBP8.2□□□□□ -1.1
BRCC3-206ENST00000399042 ZNF350Q9GZX5 532 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 QRSL1Q9H0R6 528 aaKnown RBP8.2□□□□□ -1.1
BRCC3-206ENST00000399042 PCDHAC1Q9H158 963 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 HHATLQ9HCP6 504 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 CNIH4Q9P003 139 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 PPP4R1LQ9P1A2 415 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 GMPR2Q9P2T1 348 aaKnown RBP8.2□□□□□ -1.1
BRCC3-206ENST00000399042 SUCOQ9UBS9 1254 aaKnown RBP8.2□□□□□ -1.1
BRCC3-206ENST00000399042 RPS6KA6Q9UK32 745 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 ABCG2Q9UNQ0 655 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 USP22Q9UPT9 525 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 PCDHGB7Q9Y5F8 929 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 SNX13Q9Y5W8 968 aa8.2□□□□□ -1.1
BRCC3-206ENST00000399042 ANKRD11Q6UB99 2663 aaPredicted RBP8.19□□□□□ -1.1
BRCC3-206ENST00000399042 TPRP12270 2363 aaKnown RBP8.19□□□□□ -1.1
BRCC3-206ENST00000399042 NUP214P35658 2090 aaPredicted RBP8.19□□□□□ -1.1
BRCC3-206ENST00000399042 HCRTR2O43614 444 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 KIAA0513O60268 411 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 ZNF354AO60765 605 aaPredicted RBP8.19□□□□□ -1.1
BRCC3-206ENST00000399042 CEACAM4O75871 244 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 OXSR1O95747 527 aaPredicted RBP8.19□□□□□ -1.1
BRCC3-206ENST00000399042 ANGPTL1O95841 491 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 SERPINA1P01009 418 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 CSTAP01040 98 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 OPN1SWP03999 348 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 SP1P08047 785 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 CCL3P10147 92 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 SFTPCP11686 197 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 UQCRBP14927 111 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 KDELR2P33947 212 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 GPR85P60893 370 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 KCNJ10P78508 379 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 FLOT2Q14254 428 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 TRIM25Q14258 630 aaKnown RBP8.19□□□□□ -1.1
BRCC3-206ENST00000399042 EIPR1Q53HC9 387 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 TBCELQ5QJ74 424 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 EXOSC6Q5RKV6 272 aaKnown RBP8.19□□□□□ -1.1
BRCC3-206ENST00000399042 SLC30A6Q6NXT4 461 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 FRRS1Q6ZNA5 592 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 MDGA2Q7Z553 956 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 ZAR1Q86SH2 424 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 SPATA24Q86W54 205 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 SPPL2CQ8IUH8 684 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 MISPQ8IVT2 679 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 ARMC10Q8N2F6 343 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 TEX19Q8NA77 164 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 PSD4Q8NDX1 1056 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 CATSPER1Q8NEC5 780 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 OR4C3Q8NH37 302 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 RNF217Q8TC41 542 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 FAM110BQ8TC76 370 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 SH3YL1Q96HL8 342 aaPredicted RBP8.19□□□□□ -1.1
BRCC3-206ENST00000399042 RSRC1Q96IZ7 334 aaKnown RBP8.19□□□□□ -1.1
BRCC3-206ENST00000399042 SIGLEC12Q96PQ1 595 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 NODALQ96S42 347 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 SECISBP2Q96T21 854 aaKnown RBP8.19□□□□□ -1.1
BRCC3-206ENST00000399042 RNF32Q9H0A6 362 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 SLC38A1Q9H2H9 487 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 MUC13Q9H3R2 512 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 PRORYQ9H606 182 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 PTGES2Q9H7Z7 377 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 BCL2L10Q9HD36 194 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 FLRT3Q9NZU0 649 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 B4GALT7Q9UBV7 327 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 BAG5Q9UL15 447 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 BOKQ9UMX3 212 aaPredicted RBP8.19□□□□□ -1.1
BRCC3-206ENST00000399042 ZNF443Q9Y2A4 671 aaPredicted RBP8.19□□□□□ -1.1
BRCC3-206ENST00000399042 TP53TG5Q9Y2B4 290 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 KLF13Q9Y2Y9 288 aaPredicted RBP8.19□□□□□ -1.1
BRCC3-206ENST00000399042 DTNAQ9Y4J8 743 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 V9GYQ6 96 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 ACACBO00763 2458 aa8.19□□□□□ -1.1
BRCC3-206ENST00000399042 ASPMQ8IZT6 3477 aa8.18□□□□□ -1.1
BRCC3-206ENST00000399042 PRAMEF27A3QJZ7 478 aa8.18□□□□□ -1.1
BRCC3-206ENST00000399042 SERINC4A6NH21 518 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms