RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 TPTEP56180 551 aa10.44□□□□□ -0.74
IFT140-202ENST00000397417 QPRTQ15274 297 aa10.44□□□□□ -0.74
IFT140-202ENST00000397417 CDKL4Q5MAI5 379 aa10.44□□□□□ -0.74
IFT140-202ENST00000397417 ZNF627Q7L945 461 aa10.44□□□□□ -0.74
IFT140-202ENST00000397417 CDRT4Q8N9R6 151 aa10.44□□□□□ -0.74
IFT140-202ENST00000397417 LINC01555Q8NAE3 123 aa10.44□□□□□ -0.74
IFT140-202ENST00000397417 OR5M1Q8NGP8 315 aa10.44□□□□□ -0.74
IFT140-202ENST00000397417 DUSP19Q8WTR2 217 aa10.44□□□□□ -0.74
IFT140-202ENST00000397417 NPRL2Q8WTW4 380 aa10.44□□□□□ -0.74
IFT140-202ENST00000397417 HDAC2Q92769 488 aaKnown RBP10.44□□□□□ -0.74
IFT140-202ENST00000397417 TSLPQ969D9 159 aa10.44□□□□□ -0.74
IFT140-202ENST00000397417 RPRD1BQ9NQG5 326 aaKnown RBP10.44□□□□□ -0.74
IFT140-202ENST00000397417 IFT52Q9Y366 437 aa10.44□□□□□ -0.74
IFT140-202ENST00000397417 TDRD15B5MCY1 1934 aaKnown RBP10.44□□□□□ -0.74
IFT140-202ENST00000397417 KIAA0513O60268 411 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 SCRG1O75711 98 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 ZNF24P17028 368 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 MTNR1AP48039 350 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 ALDH3B2P48448 385 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 SNU13P55769 128 aaKnown RBP10.43□□□□□ -0.74
IFT140-202ENST00000397417 KCNJ10P78508 379 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 LEG1Q6P5S2 330 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 B3GNT7Q8NFL0 401 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 OR8J1Q8NGP2 316 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.43□□□□□ -0.74
IFT140-202ENST00000397417 SERINC1Q9NRX5 453 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 LAMP5Q9UJQ1 280 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 CFL2Q9Y281 166 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 PCYT1BQ9Y5K3 369 aaPredicted RBP10.43□□□□□ -0.74
IFT140-202ENST00000397417 UNC119BA6NIH7 251 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 AKAP8O43823 692 aaKnown RBP10.43□□□□□ -0.74
IFT140-202ENST00000397417 PRAMEF4O60810 478 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 SLC6A6P31641 620 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 HLCSP50747 726 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 GBX2P52951 348 aaPredicted RBP10.43□□□□□ -0.74
IFT140-202ENST00000397417 EPHA5P54756 1037 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 OR2B6P58173 313 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 DUSP5Q16690 384 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 PRAMEF9Q5VWM5 478 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 ETFBKMTQ8IXQ9 262 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 OR8J2Q8NGG1 315 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 OSTF1Q92882 214 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 ZG16BQ96DA0 208 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 POT1Q9NUX5 634 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 DKKL1Q9UK85 242 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 ENTPD2Q9Y5L3 495 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 IL33O95760 270 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 ALPLP05186 524 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 PRKCAP17252 672 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 MAP3K8P41279 467 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 ADAM15Q13444 863 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 FGL2Q14314 439 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 DMRTC1Q5HYR2 192 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 C16orf47Q6ZP98 133 aaPredicted RBP10.43□□□□□ -0.74
IFT140-202ENST00000397417 ZNF101Q8IZC7 436 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 NEIL3Q8TAT5 605 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 NDNFQ8TB73 568 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 RBM38Q9H0Z9 239 aaKnown RBP10.43□□□□□ -0.74
IFT140-202ENST00000397417 PAK1IP1Q9NWT1 392 aaPredicted RBP10.43□□□□□ -0.74
IFT140-202ENST00000397417 COLQQ9Y215 455 aaPredicted RBP10.43□□□□□ -0.74
IFT140-202ENST00000397417 LCTP09848 1927 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 DOCK9Q9BZ29 2069 aa10.43□□□□□ -0.74
IFT140-202ENST00000397417 TAF4O00268 1085 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 MAGEB4O15481 346 aaPredicted RBP10.42□□□□□ -0.74
IFT140-202ENST00000397417 ZNF749O43361 778 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 GPR85P60893 370 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 BCL7AQ4VC05 210 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 C1QTNF12Q5T7M4 302 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 EEF1A1P5Q5VTE0 462 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 SLC36A4Q6YBV0 504 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 IKBIPQ70UQ0 350 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 GOLM1Q8NBJ4 401 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 RNASE11Q8TAA1 199 aaKnown RBP10.42□□□□□ -0.74
IFT140-202ENST00000397417 AP3S1Q92572 193 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 SGTBQ96EQ0 304 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 CCDC115Q96NT0 180 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 NPLQ9BXD5 320 aaPredicted RBP10.42□□□□□ -0.74
IFT140-202ENST00000397417 ULBP3Q9BZM4 244 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 DSN1Q9H410 356 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 DDX31Q9H8H2 851 aaKnown RBP10.42□□□□□ -0.74
IFT140-202ENST00000397417 ZSCAN32Q9NX65 697 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 KLHL42Q9P2K6 505 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 STOML2Q9UJZ1 356 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 PARP14Q460N5 1801 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 DIDO1Q9BTC0 2240 aaKnown RBP10.42□□□□□ -0.74
IFT140-202ENST00000397417 SH3PXD2BA1X283 911 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 EFCAB7A8K855 629 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 ATE1O95260 518 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 ARAFP10398 606 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 HK1P19367 917 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 MAGEA8P43361 318 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 RPS5P46782 204 aaKnown RBP10.42□□□□□ -0.74
IFT140-202ENST00000397417 VEZF1Q14119 521 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 DSG2Q14126 1118 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 ZNF829Q3KNS6 432 aaPredicted RBP10.42□□□□□ -0.74
IFT140-202ENST00000397417 TCTE1Q5JU00 501 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 FAM71E1Q6IPT2 247 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 TMEM179BQ7Z7N9 219 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 NKAIN4Q8IVV8 208 aa10.42□□□□□ -0.74
IFT140-202ENST00000397417 SLC30A8Q8IWU4 369 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms