RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 OR5P2Q8WZ92 322 aa13.27□□□□□ -0.29
SEC13-208ENST00000397109 TESCQ96BS2 214 aa13.27□□□□□ -0.29
SEC13-208ENST00000397109 MS4A4EQ96PG1 132 aa13.27□□□□□ -0.29
SEC13-208ENST00000397109 HOPXQ9BPY8 73 aaPredicted RBP13.27□□□□□ -0.29
SEC13-208ENST00000397109 TTYH2Q9BSA4 534 aa13.27□□□□□ -0.29
SEC13-208ENST00000397109 EQTNQ9NQ60 294 aa13.27□□□□□ -0.29
SEC13-208ENST00000397109 SERHLQ9NQF3 203 aa13.27□□□□□ -0.29
SEC13-208ENST00000397109 SDHAF3Q9NRP4 125 aa13.27□□□□□ -0.29
SEC13-208ENST00000397109 SOX30O94993 753 aa13.26□□□□□ -0.29
SEC13-208ENST00000397109 NKX2-2O95096 273 aa13.26□□□□□ -0.29
SEC13-208ENST00000397109 ACTL6AO96019 429 aa13.26□□□□□ -0.29
SEC13-208ENST00000397109 LAMP1P11279 417 aa13.26□□□□□ -0.29
SEC13-208ENST00000397109 EVI2BP34910 448 aa13.26□□□□□ -0.29
SEC13-208ENST00000397109 MAP3K8P41279 467 aa13.26□□□□□ -0.29
SEC13-208ENST00000397109 PRIM2P49643 509 aa13.26□□□□□ -0.29
SEC13-208ENST00000397109 CLNS1AP54105 237 aaKnown RBP13.26□□□□□ -0.29
SEC13-208ENST00000397109 CRYZQ08257 329 aaKnown RBP13.26□□□□□ -0.29
SEC13-208ENST00000397109 DPY19L1Q2PZI1 675 aa13.26□□□□□ -0.29
SEC13-208ENST00000397109 EIPR1Q53HC9 387 aa13.26□□□□□ -0.29
SEC13-208ENST00000397109 VASNQ6EMK4 673 aa13.26□□□□□ -0.29
SEC13-208ENST00000397109 SZRD1Q7Z422 152 aa13.26□□□□□ -0.29
SEC13-208ENST00000397109 GLB1L3Q8NCI6 653 aaPredicted RBP13.26□□□□□ -0.29
SEC13-208ENST00000397109 OR10Q1Q8NGQ4 319 aa13.26□□□□□ -0.29
SEC13-208ENST00000397109 LILRB4Q8NHJ6 448 aa13.26□□□□□ -0.29
SEC13-208ENST00000397109 GPR151Q8TDV0 419 aa13.26□□□□□ -0.29
SEC13-208ENST00000397109 ABTB1Q969K4 478 aaPredicted RBP13.26□□□□□ -0.29
SEC13-208ENST00000397109 TIMP4Q99727 224 aa13.26□□□□□ -0.29
SEC13-208ENST00000397109 BHLHE41Q9C0J9 482 aaPredicted RBP13.26□□□□□ -0.29
SEC13-208ENST00000397109 OR2B2Q9GZK3 357 aa13.26□□□□□ -0.29
SEC13-208ENST00000397109 HHATLQ9HCP6 504 aa13.26□□□□□ -0.29
SEC13-208ENST00000397109 CCDC167Q9P0B6 97 aa13.26□□□□□ -0.29
SEC13-208ENST00000397109 RNF6Q9Y252 685 aa13.26□□□□□ -0.29
SEC13-208ENST00000397109 MRPS18CQ9Y3D5 142 aaKnown RBP13.26□□□□□ -0.29
SEC13-208ENST00000397109 FAM215AQ9Y5M1 114 aa13.26□□□□□ -0.29
SEC13-208ENST00000397109 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.25□□□□□ -0.29
SEC13-208ENST00000397109 FADS1O60427 444 aa13.25□□□□□ -0.29
SEC13-208ENST00000397109 GLI4P10075 376 aa13.25□□□□□ -0.29
SEC13-208ENST00000397109 GRNP28799 593 aaKnown RBP13.25□□□□□ -0.29
SEC13-208ENST00000397109 SRD5A2P31213 254 aa13.25□□□□□ -0.29
SEC13-208ENST00000397109 GAS1P54826 345 aa13.25□□□□□ -0.29
SEC13-208ENST00000397109 KPNB1Q14974 876 aaKnown RBP13.25□□□□□ -0.29
SEC13-208ENST00000397109 WIPI1Q5MNZ9 446 aaPredicted RBP13.25□□□□□ -0.29
SEC13-208ENST00000397109 C1orf146Q5VVC0 180 aa13.25□□□□□ -0.29
SEC13-208ENST00000397109 RTL6Q6ICC9 239 aa13.25□□□□□ -0.29
SEC13-208ENST00000397109 WDR53Q7Z5U6 358 aaPredicted RBP13.25□□□□□ -0.29
SEC13-208ENST00000397109 YRDCQ86U90 279 aaKnown RBP13.25□□□□□ -0.29
SEC13-208ENST00000397109 RPRMLQ8N4K4 120 aa13.25□□□□□ -0.29
SEC13-208ENST00000397109 KRTCAP2Q8N6L1 136 aa13.25□□□□□ -0.29
SEC13-208ENST00000397109 OR8J2Q8NGG1 315 aa13.25□□□□□ -0.29
SEC13-208ENST00000397109 OR14L1PQ8NHC6 308 aa13.25□□□□□ -0.29
SEC13-208ENST00000397109 PSMA8Q8TAA3 256 aa13.25□□□□□ -0.29
SEC13-208ENST00000397109 SLC9A6Q92581 669 aa13.25□□□□□ -0.29
SEC13-208ENST00000397109 RCN3Q96D15 328 aa13.25□□□□□ -0.29
SEC13-208ENST00000397109 GIMAP5Q96F15 307 aa13.25□□□□□ -0.29
SEC13-208ENST00000397109 MARK4Q96L34 752 aa13.25□□□□□ -0.29
SEC13-208ENST00000397109 DPY30Q9C005 99 aa13.25□□□□□ -0.29
SEC13-208ENST00000397109 NEUROD4Q9HD90 331 aa13.25□□□□□ -0.29
SEC13-208ENST00000397109 SIRT3Q9NTG7 399 aaPredicted RBP13.25□□□□□ -0.29
SEC13-208ENST00000397109 ZCCHC3Q9NUD5 404 aaKnown RBP13.25□□□□□ -0.29
SEC13-208ENST00000397109 GID8Q9NWU2 228 aa13.25□□□□□ -0.29
SEC13-208ENST00000397109 FAM120CQ9NX05 1096 aaKnown RBP13.25□□□□□ -0.29
SEC13-208ENST00000397109 STX18Q9P2W9 335 aaKnown RBP13.25□□□□□ -0.29
SEC13-208ENST00000397109 STOML1Q9UBI4 398 aa13.25□□□□□ -0.29
SEC13-208ENST00000397109 SLC6A5Q9Y345 797 aa13.25□□□□□ -0.29
SEC13-208ENST00000397109 CRYBG3Q68DQ2 2970 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 ENTPD5O75356 428 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 SLC22A3O75751 556 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 ALOX5P09917 674 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 COX6B1P14854 86 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 BMP7P18075 431 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 EFNA1P20827 205 aaPredicted RBP13.24□□□□□ -0.29
SEC13-208ENST00000397109 LCN1P31025 176 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 UFM1P61960 85 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 CDSNQ15517 529 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 RIPPLY2Q5TAB7 128 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 MFSD12Q6NUT3 480 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 BLOC1S3Q6QNY0 202 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 ENPP6Q6UWR7 440 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 FUNDC1Q8IVP5 155 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 OR4K17Q8NGC6 315 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 OR56A1Q8NGH5 318 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 MARVELD3Q96A59 401 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 MOAP1Q96BY2 351 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 FAM120BQ96EK7 910 aaKnown RBP13.24□□□□□ -0.29
SEC13-208ENST00000397109 RMND5BQ96G75 393 aaPredicted RBP13.24□□□□□ -0.29
SEC13-208ENST00000397109 TEX37Q96LM6 180 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 DUSP26Q9BV47 211 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 UGT2B28Q9BY64 529 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 PRDM14Q9GZV8 571 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 GIN1Q9NXP7 522 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 TAS2R10Q9NYW0 307 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 PPP4R1LQ9P1A2 415 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 SNX8Q9Y5X2 465 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 MED12Q93074 2177 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 ARHGAP21Q5T5U3 1957 aa13.24□□□□□ -0.29
SEC13-208ENST00000397109 INTS1Q8N201 2190 aaKnown RBP13.24□□□□□ -0.29
SEC13-208ENST00000397109 A0A1W2PP18 115 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 GXYLT2A0PJZ3 443 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 CFLARO15519 480 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 SCO2O43819 266 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms