RNA–Protein interactions for RNA: ENST00000396340.1

CDKN1B-202, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3 BASIC

Gene CDKN1B, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-202ENST00000396340 PMM1Q92871 262 aa17.53■□□□□ 0.4
CDKN1B-202ENST00000396340 MAELQ96JY0 434 aaKnown RBP17.53■□□□□ 0.4
CDKN1B-202ENST00000396340 CXorf36Q9H7Y0 433 aa17.53■□□□□ 0.4
CDKN1B-202ENST00000396340 ZNF395Q9H8N7 513 aaPredicted RBP17.53■□□□□ 0.4
CDKN1B-202ENST00000396340 AIG1Q9NVV5 245 aa17.53■□□□□ 0.4
CDKN1B-202ENST00000396340 GPATCH2Q9NW75 528 aa17.53■□□□□ 0.4
CDKN1B-202ENST00000396340 TNFRSF10DQ9UBN6 386 aa17.53■□□□□ 0.4
CDKN1B-202ENST00000396340 Q9UFV3 132 aa17.53■□□□□ 0.4
CDKN1B-202ENST00000396340 PRDM4Q9UKN5 801 aa17.53■□□□□ 0.4
CDKN1B-202ENST00000396340 GXYLT2A0PJZ3 443 aa17.52■□□□□ 0.4
CDKN1B-202ENST00000396340 C7orf72A4D263 438 aa17.52■□□□□ 0.4
CDKN1B-202ENST00000396340 ZIC3O60481 467 aa17.52■□□□□ 0.4
CDKN1B-202ENST00000396340 NME6O75414 186 aaPredicted RBP17.52■□□□□ 0.4
CDKN1B-202ENST00000396340 ZNF708P17019 499 aa17.52■□□□□ 0.4
CDKN1B-202ENST00000396340 CAPN3P20807 821 aa17.52■□□□□ 0.4
CDKN1B-202ENST00000396340 MATN1P21941 496 aa17.52■□□□□ 0.4
CDKN1B-202ENST00000396340 CTSSP25774 331 aa17.52■□□□□ 0.4
CDKN1B-202ENST00000396340 DCST2Q5T1A1 773 aa17.52■□□□□ 0.4
CDKN1B-202ENST00000396340 OR5M10Q6IEU7 315 aa17.52■□□□□ 0.4
CDKN1B-202ENST00000396340 OR4F3Q6IEY1 312 aa17.52■□□□□ 0.4
CDKN1B-202ENST00000396340 C6orf120Q7Z4R8 191 aa17.52■□□□□ 0.4
CDKN1B-202ENST00000396340 WDR53Q7Z5U6 358 aaPredicted RBP17.52■□□□□ 0.4
CDKN1B-202ENST00000396340 MARCH3Q86UD3 253 aa17.52■□□□□ 0.4
CDKN1B-202ENST00000396340 KIF18BQ86Y91 864 aa17.52■□□□□ 0.4
CDKN1B-202ENST00000396340 ACBD4Q8NC06 268 aa17.52■□□□□ 0.4
CDKN1B-202ENST00000396340 ZNF75CPQ92670 426 aaPredicted RBP17.52■□□□□ 0.4
CDKN1B-202ENST00000396340 TRIB1Q96RU8 372 aa17.52■□□□□ 0.4
CDKN1B-202ENST00000396340 TREX2Q9BQ50 279 aaPredicted RBP17.52■□□□□ 0.4
CDKN1B-202ENST00000396340 NMUR2Q9GZQ4 415 aa17.52■□□□□ 0.4
CDKN1B-202ENST00000396340 RNF103-CHMP3A0A140T963 221 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 SDHDO14521 159 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 ANKRD28O15084 1053 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 STX11O75558 287 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 TOXO94900 526 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 PGRP06401 933 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 FCGR2AP12318 317 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 POU3F2P20265 443 aaPredicted RBP17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 ME2P23368 584 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 ADH6P28332 368 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 LHX2P50458 406 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 ASCL1P50553 236 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 ATP12AP54707 1039 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 FAM174BQ3ZCQ3 159 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 FLYWCH1Q4VC44 716 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 PDCD4Q53EL6 469 aaKnown RBP17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 PDSS1Q5T2R2 415 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 NXNQ6DKJ4 435 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 FIGNL1Q6PIW4 674 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 MSANTD1Q6ZTZ1 278 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 C16orf62Q7Z3J2 963 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 CCDC71Q8IV32 467 aaPredicted RBP17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 MCEMP1Q8IX19 187 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 OR4C3Q8NH37 302 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 CDS1Q92903 461 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 C16orf58Q96GQ5 468 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 SLC35G5Q96KT7 338 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 CCDC115Q96NT0 180 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 SFXN3Q9BWM7 321 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 RMND5AQ9H871 391 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 TMEM45AQ9NWC5 275 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 ZIM2Q9NZV7 527 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 MED11Q9P086 117 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 KCNN3Q9UGI6 736 aa17.51■□□□□ 0.39
CDKN1B-202ENST00000396340 ITPR2Q14571 2701 aa17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 GJE1A6NN92 205 aa17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 SYT5O00445 386 aa17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 TNFRSF21O75509 655 aa17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 SLC22A3O75751 556 aa17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 RCBTB2O95199 551 aa17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 KITP10721 976 aa17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 EPHA3P29320 983 aa17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 CHI3L1P36222 383 aaPredicted RBP17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 DGKQP52824 942 aa17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 HPCAP84074 193 aa17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 STX5Q13190 355 aa17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 FBXL19-AS1Q494R0 122 aa17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 AP1ARQ63HQ0 302 aa17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 MEX3BQ6ZN04 569 aaKnown RBP17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 ADGRE4PQ86SQ3 457 aa17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 RPRMLQ8N4K4 120 aa17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 CHDHQ8NE62 594 aaPredicted RBP17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 TOR1AIP2Q8NFQ8 470 aa17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 OR7D2Q96RA2 312 aa17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 OR52E6Q96RD3 313 aa17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 PANX1Q96RD7 426 aa17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 SH3GL2Q99962 352 aa17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 YIPF4Q9BSR8 244 aa17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 PIGMQ9H3S5 423 aa17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 THUMPD1Q9NXG2 353 aaKnown RBP17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 LIPT1Q9Y234 373 aa17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 DTNAQ9Y4J8 743 aa17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 GPR45Q9Y5Y3 372 aa17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 PCNX3Q9H6A9 2034 aa17.5■□□□□ 0.39
CDKN1B-202ENST00000396340 FAM90A27PA6NNH2 459 aa17.49■□□□□ 0.39
CDKN1B-202ENST00000396340 GTPBP1O00178 669 aaKnown RBP17.49■□□□□ 0.39
CDKN1B-202ENST00000396340 UBDO15205 165 aa17.49■□□□□ 0.39
CDKN1B-202ENST00000396340 EIF4E2O60573 245 aaKnown RBP17.49■□□□□ 0.39
CDKN1B-202ENST00000396340 KRT75O95678 551 aa17.49■□□□□ 0.39
CDKN1B-202ENST00000396340 IGKV1D-16P01601 117 aa17.49■□□□□ 0.39
CDKN1B-202ENST00000396340 IGFBP2P18065 325 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms