RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 CA13Q8N1Q1 262 aa14.29□□□□□ -0.12
CPSF7-202ENST00000394888 GALNT6Q8NCL4 622 aa14.29□□□□□ -0.12
CPSF7-202ENST00000394888 SRFBP1Q8NEF9 429 aaKnown RBP14.29□□□□□ -0.12
CPSF7-202ENST00000394888 MCHR1Q99705 422 aa14.29□□□□□ -0.12
CPSF7-202ENST00000394888 PIGUQ9H490 435 aa14.29□□□□□ -0.12
CPSF7-202ENST00000394888 FLRT3Q9NZU0 649 aa14.29□□□□□ -0.12
CPSF7-202ENST00000394888 POU2F3Q9UKI9 436 aa14.29□□□□□ -0.12
CPSF7-202ENST00000394888 ZNF780BQ9Y6R6 833 aa14.29□□□□□ -0.12
CPSF7-202ENST00000394888 GXYLT2A0PJZ3 443 aa14.29□□□□□ -0.12
CPSF7-202ENST00000394888 OR6C74A6NCV1 312 aa14.29□□□□□ -0.12
CPSF7-202ENST00000394888 GUCY1B2O75343 617 aa14.29□□□□□ -0.12
CPSF7-202ENST00000394888 GKN3PP0CG01 181 aa14.29□□□□□ -0.12
CPSF7-202ENST00000394888 MAGEA10P43363 369 aaPredicted RBP14.29□□□□□ -0.12
CPSF7-202ENST00000394888 ST3GAL3Q11203 375 aa14.29□□□□□ -0.12
CPSF7-202ENST00000394888 EIF2B5Q13144 721 aaKnown RBP14.29□□□□□ -0.12
CPSF7-202ENST00000394888 KRT33BQ14525 404 aa14.29□□□□□ -0.12
CPSF7-202ENST00000394888 FIGLAQ6QHK4 219 aa14.29□□□□□ -0.12
CPSF7-202ENST00000394888 BRIX1Q8TDN6 353 aaKnown RBP14.29□□□□□ -0.12
CPSF7-202ENST00000394888 HOXD1Q9GZZ0 328 aa14.29□□□□□ -0.12
CPSF7-202ENST00000394888 RNF32Q9H0A6 362 aa14.29□□□□□ -0.12
CPSF7-202ENST00000394888 MTHFD2LQ9H903 347 aaPredicted RBP14.29□□□□□ -0.12
CPSF7-202ENST00000394888 LYRM4Q9HD34 91 aa14.29□□□□□ -0.12
CPSF7-202ENST00000394888 ABCB9Q9NP78 766 aa14.29□□□□□ -0.12
CPSF7-202ENST00000394888 ZMIZ1Q9ULJ6 1067 aa14.29□□□□□ -0.12
CPSF7-202ENST00000394888 CEP192Q8TEP8 1941 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 HRKO00198 91 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 TNFRSF10CO14798 259 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 PLOD3O60568 738 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 CDRT1O95170 752 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 STAT5AP42229 794 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 NRARPQ7Z6K4 114 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 OR4K14Q8NGD5 310 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 SLC35B4Q969S0 331 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 ABHD8Q96I13 439 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 UBQLN3Q9H347 655 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 DTX4Q9Y2E6 619 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 CSNK1G3Q9Y6M4 447 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 CSF3P09919 207 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 GABRA5P31644 462 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 ACTR1BP42025 376 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 ACTR1AP61163 376 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 FAM53BQ14153 422 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 OR13H1Q8NG92 308 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 PTP4A1Q93096 173 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 FBRSQ9HAH7 460 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 CLDND1Q9NY35 253 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 SATB2Q9UPW6 733 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 SPIN1Q9Y657 262 aaPredicted RBP14.28□□□□□ -0.12
CPSF7-202ENST00000394888 A0A087WV62 115 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 SMIM30A4D0T7 59 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 FAM183AA6NL82 134 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 PLA2G10O15496 165 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 CLPSP04118 112 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 CPN2P22792 545 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 HTR1FP30939 366 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 EXOSC7Q15024 291 aaKnown RBP14.28□□□□□ -0.12
CPSF7-202ENST00000394888 KCNJ8Q15842 424 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 ZNF730Q6ZMV8 503 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 PPP1R3EQ9H7J1 279 aa14.28□□□□□ -0.12
CPSF7-202ENST00000394888 USP36Q9P275 1121 aaKnown RBP14.28□□□□□ -0.12
CPSF7-202ENST00000394888 PTP4A3O75365 173 aa14.27□□□□□ -0.12
CPSF7-202ENST00000394888 ALOX12P18054 663 aa14.27□□□□□ -0.12
CPSF7-202ENST00000394888 HNRNPA2B1P22626 353 aaKnown RBP14.27□□□□□ -0.12
CPSF7-202ENST00000394888 PSMA1P25786 263 aaKnown RBP14.27□□□□□ -0.12
CPSF7-202ENST00000394888 MXD1Q05195 221 aa14.27□□□□□ -0.12
CPSF7-202ENST00000394888 BCL2A1Q16548 175 aa14.27□□□□□ -0.12
CPSF7-202ENST00000394888 DCST2Q5T1A1 773 aa14.27□□□□□ -0.12
CPSF7-202ENST00000394888 MRPL2Q5T653 305 aaKnown RBP14.27□□□□□ -0.12
CPSF7-202ENST00000394888 LINC00114Q6XXX2 140 aa14.27□□□□□ -0.12
CPSF7-202ENST00000394888 LHFPL3Q86UP9 236 aa14.27□□□□□ -0.12
CPSF7-202ENST00000394888 NLGN4YQ8NFZ3 816 aaPredicted RBP14.27□□□□□ -0.12
CPSF7-202ENST00000394888 NR4A3Q92570 626 aa14.27□□□□□ -0.12
CPSF7-202ENST00000394888 SIPA1Q96FS4 1042 aa14.27□□□□□ -0.12
CPSF7-202ENST00000394888 SAMD8Q96LT4 415 aa14.27□□□□□ -0.12
CPSF7-202ENST00000394888 NUAK2Q9H093 628 aa14.27□□□□□ -0.12
CPSF7-202ENST00000394888 MED20Q9H944 212 aa14.27□□□□□ -0.12
CPSF7-202ENST00000394888 B3GAT2Q9NPZ5 323 aa14.27□□□□□ -0.12
CPSF7-202ENST00000394888 BRWD1Q9NSI6 2320 aa14.27□□□□□ -0.12
CPSF7-202ENST00000394888 SCML1Q9UN30 329 aa14.27□□□□□ -0.12
CPSF7-202ENST00000394888 CDH10Q9Y6N8 788 aa14.27□□□□□ -0.12
CPSF7-202ENST00000394888 FER1L5A0AVI2 2057 aa14.27□□□□□ -0.13
CPSF7-202ENST00000394888 PNMA8CA0A1B0GUJ8 204 aa14.27□□□□□ -0.13
CPSF7-202ENST00000394888 GALR3O60755 368 aaPredicted RBP14.27□□□□□ -0.13
CPSF7-202ENST00000394888 NID1P14543 1247 aa14.27□□□□□ -0.13
CPSF7-202ENST00000394888 NDUFS1P28331 727 aa14.27□□□□□ -0.13
CPSF7-202ENST00000394888 RORCP51449 518 aa14.27□□□□□ -0.13
CPSF7-202ENST00000394888 HNRNPA0Q13151 305 aaKnown RBP14.27□□□□□ -0.13
CPSF7-202ENST00000394888 CCINQ13939 588 aa14.27□□□□□ -0.13
CPSF7-202ENST00000394888 C16orf62Q7Z3J2 963 aa14.27□□□□□ -0.13
CPSF7-202ENST00000394888 RD3Q7Z3Z2 195 aa14.27□□□□□ -0.13
CPSF7-202ENST00000394888 ZNF524Q96C55 264 aa14.27□□□□□ -0.13
CPSF7-202ENST00000394888 ATF6BQ99941 703 aa14.27□□□□□ -0.13
CPSF7-202ENST00000394888 STARD5Q9NSY2 213 aa14.27□□□□□ -0.13
CPSF7-202ENST00000394888 CEP290O15078 2479 aa14.27□□□□□ -0.13
CPSF7-202ENST00000394888 BRINP1O60477 761 aa14.27□□□□□ -0.13
CPSF7-202ENST00000394888 HLA-DQB1P01920 261 aa14.27□□□□□ -0.13
CPSF7-202ENST00000394888 IL7P13232 177 aa14.27□□□□□ -0.13
CPSF7-202ENST00000394888 PSG6Q00889 435 aa14.27□□□□□ -0.13
CPSF7-202ENST00000394888 NIPAL3Q6P499 406 aa14.27□□□□□ -0.13
CPSF7-202ENST00000394888 UBQLNLQ8IYU4 475 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms