RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 CSNK2A2P19784 350 aaPredicted RBP17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 ATP6V1E1P36543 226 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 ZNF57Q68EA5 555 aaPredicted RBP17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 SLC48A1Q6P1K1 146 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 OR9A2Q8NGT5 310 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 TMEM255BQ8WV15 326 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 DEDD2Q8WXF8 326 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 OTULINQ96BN8 352 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 ING3Q9NXR8 418 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 OBP2AQ9NY56 170 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 TNFRSF10DQ9UBN6 386 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 EXTL2Q9UBQ6 330 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 SIRT4Q9Y6E7 314 aaPredicted RBP17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 ATG2BQ96BY7 2078 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 IGLON5A6NGN9 336 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 FAM183AA6NL82 134 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 J3QRE1 110 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 GTPBP1O00178 669 aaKnown RBP17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 ARHGEF9O43307 516 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 PTNP21246 168 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 CERS1P27544 350 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 RGS8P57771 180 aaPredicted RBP17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 CSTF1Q05048 431 aaKnown RBP17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 LAMTOR1Q6IAA8 161 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 CPOQ8IVL8 374 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 SMRP1Q8NCR6 262 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 OR4M2Q8NGB6 313 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 ELP4Q96EB1 424 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 SAMD8Q96LT4 415 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 MCHR1Q99705 422 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 JAM3Q9BX67 310 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 TEX12Q9BXU0 123 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 IRF2BPLQ9H1B7 796 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 SYNPO2LQ9H987 977 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 SLC6A20Q9NP91 592 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 SCN3AQ9NY46 2000 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 INMT-MINDY4F8WBC2 141 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 RNF13O43567 381 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 HRO43593 1189 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 FCMRO60667 390 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 PRKAR1BP31321 381 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 IFNA8P32881 189 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 EVI2BP34910 448 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 PDX1P52945 283 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 SNRPD2P62316 118 aaKnown RBP17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 MBOAT2Q6ZWT7 520 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 C16orf62Q7Z3J2 963 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 RAB42Q8N4Z0 105 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 OR51G2Q8NGK0 314 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 ZFPM2Q8WW38 1151 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 SNAPC3Q92966 411 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 SLC41A3Q96GZ6 507 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 GTPBP2Q9BX10 602 aaKnown RBP17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 CALML5Q9NZT1 146 aa17.11■□□□□ 0.33
PCDHA1-202ENST00000394633 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.1■□□□□ 0.33
PCDHA1-202ENST00000394633 SOX1O00570 391 aaPredicted RBP17.1■□□□□ 0.33
PCDHA1-202ENST00000394633 CDC42EP2O14613 210 aa17.1■□□□□ 0.33
PCDHA1-202ENST00000394633 LATO43561 262 aa17.1■□□□□ 0.33
PCDHA1-202ENST00000394633 RGS9O75916 674 aaPredicted RBP17.1■□□□□ 0.33
PCDHA1-202ENST00000394633 GALP22466 123 aa17.1■□□□□ 0.33
PCDHA1-202ENST00000394633 RAB28P51157 221 aa17.1■□□□□ 0.33
PCDHA1-202ENST00000394633 LRRC32Q14392 662 aa17.1■□□□□ 0.33
PCDHA1-202ENST00000394633 LTB4RQ15722 352 aa17.1■□□□□ 0.33
PCDHA1-202ENST00000394633 IDNKQ5T6J7 187 aa17.1■□□□□ 0.33
PCDHA1-202ENST00000394633 SMARCD3Q6STE5 483 aa17.1■□□□□ 0.33
PCDHA1-202ENST00000394633 OR4M1Q8NGD0 313 aa17.1■□□□□ 0.33
PCDHA1-202ENST00000394633 KAT2AQ92830 837 aa17.1■□□□□ 0.33
PCDHA1-202ENST00000394633 GIMAP5Q96F15 307 aa17.1■□□□□ 0.33
PCDHA1-202ENST00000394633 FCRL4Q96PJ5 515 aa17.1■□□□□ 0.33
PCDHA1-202ENST00000394633 UBL7Q96S82 380 aaPredicted RBP17.1■□□□□ 0.33
PCDHA1-202ENST00000394633 OSGEPL1Q9H4B0 414 aa17.1■□□□□ 0.33
PCDHA1-202ENST00000394633 H2AFY2Q9P0M6 372 aaPredicted RBP17.1■□□□□ 0.33
PCDHA1-202ENST00000394633 PTGFRNQ9P2B2 879 aa17.1■□□□□ 0.33
PCDHA1-202ENST00000394633 ZFR2Q9UPR6 939 aaKnown RBP17.1■□□□□ 0.33
PCDHA1-202ENST00000394633 COLQQ9Y215 455 aaPredicted RBP17.1■□□□□ 0.33
PCDHA1-202ENST00000394633 LANCL1O43813 399 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 OR2B3O76000 313 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 GDI1P31150 447 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 RAB25P57735 213 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 MAB21L1Q13394 359 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 RUNX3Q13761 415 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 GPR176Q14439 515 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 CXXC5Q7LFL8 322 aaKnown RBP17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 OR2T33Q8NG76 320 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 OR2L5Q8NG80 312 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 ACOT12Q8WYK0 555 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 SLC35A4Q96G79 324 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 ZNF681Q96N22 645 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 TIMP4Q99727 224 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 TRAF4Q9BUZ4 470 aaPredicted RBP17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 C6orf106Q9H6K1 298 aaPredicted RBP17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 MRPS30Q9NP92 439 aaKnown RBP17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 IMP3Q9NV31 184 aaKnown RBP17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 KLHL28Q9NXS3 571 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 DEC1Q9P2X7 70 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 ACSL5Q9ULC5 683 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 OR1A2Q9Y585 309 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 ZC3H12DA2A288 527 aaKnown RBP17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 HMGN1P05114 100 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 NDUFV2P19404 249 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms