RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 GSAPA4D1B5 854 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 SLC30A4O14863 429 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 CTBP2P56545 445 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 FXYD6P3P58550 94 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 TRA2BP62995 288 aaKnown RBP12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 DUSP5Q16690 384 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 KLHL22Q53GT1 634 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 ZNF628Q5EBL2 1059 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 SLC25A30Q5SVS4 291 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 TMEM64Q6YI46 380 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 RRM2BQ7LG56 351 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 FAM181AQ8N9Y4 354 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 POGLUT1Q8NBL1 392 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 SLC41A3Q96GZ6 507 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 C10orf90Q96M02 699 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 SECISBP2Q96T21 854 aaKnown RBP12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 RNF32Q9H0A6 362 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 SLC13A4Q9UKG4 626 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 CBLCQ9ULV8 474 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 NOX1Q9Y5S8 564 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 ATXN8OSP0DMR3 200 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 RAB25P57735 213 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 TMEM35AQ53FP2 167 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 PLBD1Q6P4A8 553 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 ZNF836Q6ZNA1 936 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 TMEM99Q8N816 258 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 FRMD1Q8N878 549 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 BMPERQ8N8U9 685 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 SMRP1Q8NCR6 262 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 OR56A1Q8NGH5 318 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 ZNF764Q96H86 408 aaPredicted RBP12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 SPATA5L1Q9BVQ7 753 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 CAPN10Q9HC96 672 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 CD207Q9UJ71 328 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 COL4A2P08572 1712 aa12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 TNRC18O15417 2968 aaPredicted RBP12.56□□□□□ -0.4
GTF2F1-201ENST00000394456 TCRBV21S2A2A0A5A6 115 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 TMEM129A0AVI4 362 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 E9PI62 339 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 SMLR1H3BR10 107 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 GABRPO00591 440 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 PEX12O00623 359 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 CLUP10909 449 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 MPIP34949 423 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 TPMTP51580 245 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 SCN1BQ07699 218 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 KRR1Q13601 381 aaKnown RBP12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 RUNX2Q13950 521 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 NDUFA9Q16795 377 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 PUS10Q3MIT2 529 aaKnown RBP12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 ZFP69Q49AA0 526 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 DDI2Q5TDH0 399 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 ZC3H14Q6PJT7 736 aaKnown RBP12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 TMEM91Q6ZNR0 172 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 RASSF6Q6ZTQ3 369 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 MRGPREQ86SM8 312 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 CLDN22Q8N7P3 220 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 ARIH2OSQ8N7S6 290 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 PIGXQ8TBF5 258 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 ADAMTS15Q8TE58 950 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 BMFQ96LC9 184 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 ATF6BQ99941 703 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 TMEM168Q9H0V1 697 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 ZNF576Q9H609 170 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 PAQR5Q9NXK6 330 aaPredicted RBP12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 KCNE5Q9UJ90 142 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 FBXL4Q9UKA2 621 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 C2CD4DB7Z1M9 353 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 STK25O00506 426 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 CASC3O15234 703 aaKnown RBP12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 CTSVO60911 334 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 LDB3O75112 727 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 REM1O75628 298 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 RASGRP1O95267 797 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 MRPL3P09001 348 aaKnown RBP12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 MAKP20794 623 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 HTR2AP28223 471 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 ATP6V1E1P36543 226 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 ACTR1BP42025 376 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 ACTR1AP61163 376 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 PRR5P85299 388 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 PGGHGQ32M88 737 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 EOGTQ5NDL2 527 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 XKRXQ6PP77 449 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 ZNF620Q6ZNG0 422 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 TMEM52Q8NDY8 209 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 SFXN5Q8TD22 340 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 HMGB4Q8WW32 186 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 SLC38A2Q96QD8 506 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 TIMP4Q99727 224 aa12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 MRPS18AQ9NVS2 196 aaKnown RBP12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 ZNF443Q9Y2A4 671 aaPredicted RBP12.55□□□□□ -0.4
GTF2F1-201ENST00000394456 LOC105369274A0A096LPK9 316 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 LOC102723532A0A0G2JNH3 316 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 FAM47E-STBD1D6RA91 191 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 MAGEB4O15481 346 aaPredicted RBP12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 PVRP15151 417 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 GSTM3P21266 225 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 GABRA5P31644 462 aa12.54□□□□□ -0.4
GTF2F1-201ENST00000394456 RFX3P48380 749 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms