RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 CPSF4O95639 269 aaKnown RBP27.83■■■□□ 2.05
CMTM4-202ENST00000394106 BMP5P22003 454 aa27.83■■■□□ 2.05
CMTM4-202ENST00000394106 CLDN18P56856 261 aa27.83■■■□□ 2.05
CMTM4-202ENST00000394106 SPANXN4Q5MJ08 99 aa27.83■■■□□ 2.05
CMTM4-202ENST00000394106 DCST2Q5T1A1 773 aa27.83■■■□□ 2.05
CMTM4-202ENST00000394106 ANXA8L1Q5VT79 327 aa27.83■■■□□ 2.05
CMTM4-202ENST00000394106 NXNQ6DKJ4 435 aa27.83■■■□□ 2.05
CMTM4-202ENST00000394106 SPATA19Q7Z5L4 167 aa27.83■■■□□ 2.05
CMTM4-202ENST00000394106 VPS37AQ8NEZ2 397 aa27.83■■■□□ 2.05
CMTM4-202ENST00000394106 OR5D16Q8NGK9 328 aa27.83■■■□□ 2.05
CMTM4-202ENST00000394106 ATP6V1G3Q96LB4 118 aa27.83■■■□□ 2.05
CMTM4-202ENST00000394106 OR7D2Q96RA2 312 aa27.83■■■□□ 2.05
CMTM4-202ENST00000394106 AIG1Q9NVV5 245 aa27.83■■■□□ 2.05
CMTM4-202ENST00000394106 IGLV3-32A0A0A0MS00 114 aa27.82■■■□□ 2.04
CMTM4-202ENST00000394106 MBD3L4A6NDZ8 208 aaPredicted RBP27.82■■■□□ 2.04
CMTM4-202ENST00000394106 MBD3L3A6NE82 208 aaPredicted RBP27.82■■■□□ 2.04
CMTM4-202ENST00000394106 MBD3L5A6NJ08 208 aaPredicted RBP27.82■■■□□ 2.04
CMTM4-202ENST00000394106 DVL2O14641 736 aa27.82■■■□□ 2.04
CMTM4-202ENST00000394106 ZNF708P17019 499 aa27.82■■■□□ 2.04
CMTM4-202ENST00000394106 POU3F2P20265 443 aaPredicted RBP27.82■■■□□ 2.04
CMTM4-202ENST00000394106 UFM1P61960 85 aa27.82■■■□□ 2.04
CMTM4-202ENST00000394106 PHC1P78364 1004 aa27.82■■■□□ 2.04
CMTM4-202ENST00000394106 FAM174BQ3ZCQ3 159 aa27.82■■■□□ 2.04
CMTM4-202ENST00000394106 PLXDC2Q6UX71 529 aa27.82■■■□□ 2.04
CMTM4-202ENST00000394106 C6orf120Q7Z4R8 191 aa27.82■■■□□ 2.04
CMTM4-202ENST00000394106 UBQLNLQ8IYU4 475 aa27.82■■■□□ 2.04
CMTM4-202ENST00000394106 ACBD4Q8NC06 268 aa27.82■■■□□ 2.04
CMTM4-202ENST00000394106 MBD3L2Q8NHZ7 208 aaPredicted RBP27.82■■■□□ 2.04
CMTM4-202ENST00000394106 ZNF75CPQ92670 426 aaPredicted RBP27.82■■■□□ 2.04
CMTM4-202ENST00000394106 PRSS51A0A1B0GVH4 220 aa27.81■■■□□ 2.04
CMTM4-202ENST00000394106 CLCA1A8K7I4 914 aa27.81■■■□□ 2.04
CMTM4-202ENST00000394106 E9PBE3 544 aa27.81■■■□□ 2.04
CMTM4-202ENST00000394106 MATN1P21941 496 aa27.81■■■□□ 2.04
CMTM4-202ENST00000394106 S100A3P33764 101 aa27.81■■■□□ 2.04
CMTM4-202ENST00000394106 DGKQP52824 942 aa27.81■■■□□ 2.04
CMTM4-202ENST00000394106 DPY19L1Q2PZI1 675 aa27.81■■■□□ 2.04
CMTM4-202ENST00000394106 ARSKQ6UWY0 536 aa27.81■■■□□ 2.04
CMTM4-202ENST00000394106 ZNF295-AS1Q8N0V1 137 aa27.81■■■□□ 2.04
CMTM4-202ENST00000394106 C9orf106Q8NAJ2 232 aa27.81■■■□□ 2.04
CMTM4-202ENST00000394106 SH3YL1Q96HL8 342 aaPredicted RBP27.81■■■□□ 2.04
CMTM4-202ENST00000394106 SLC35G5Q96KT7 338 aa27.81■■■□□ 2.04
CMTM4-202ENST00000394106 TEX37Q96LM6 180 aa27.81■■■□□ 2.04
CMTM4-202ENST00000394106 HHATLQ9HCP6 504 aa27.81■■■□□ 2.04
CMTM4-202ENST00000394106 VDAC3Q9Y277 283 aa27.81■■■□□ 2.04
CMTM4-202ENST00000394106 NPIPA5A0A0B4J1W7 369 aa27.8■■■□□ 2.04
CMTM4-202ENST00000394106 C9JVG2 144 aa27.8■■■□□ 2.04
CMTM4-202ENST00000394106 NPIPA7E9PJI5 369 aa27.8■■■□□ 2.04
CMTM4-202ENST00000394106 KLF11O14901 512 aa27.8■■■□□ 2.04
CMTM4-202ENST00000394106 SCN2BO60939 215 aa27.8■■■□□ 2.04
CMTM4-202ENST00000394106 SOX30O94993 753 aa27.8■■■□□ 2.04
CMTM4-202ENST00000394106 NPIPA8P0DM63 369 aa27.8■■■□□ 2.04
CMTM4-202ENST00000394106 IGFBP2P18065 325 aa27.8■■■□□ 2.04
CMTM4-202ENST00000394106 ZNF136P52737 540 aa27.8■■■□□ 2.04
CMTM4-202ENST00000394106 TTMPQ5BVD1 217 aa27.8■■■□□ 2.04
CMTM4-202ENST00000394106 RELL2Q8NC24 303 aaPredicted RBP27.8■■■□□ 2.04
CMTM4-202ENST00000394106 PIGQQ9BRB3 760 aa27.8■■■□□ 2.04
CMTM4-202ENST00000394106 SERHL2Q9H4I8 314 aa27.8■■■□□ 2.04
CMTM4-202ENST00000394106 ARGLU1Q9NWB6 273 aaPredicted RBP27.8■■■□□ 2.04
CMTM4-202ENST00000394106 ZNF337Q9Y3M9 751 aa27.8■■■□□ 2.04
CMTM4-202ENST00000394106 INTS1Q8N201 2190 aaKnown RBP27.8■■■□□ 2.04
CMTM4-202ENST00000394106 TEX15Q9BXT5 2789 aa27.8■■■□□ 2.04
CMTM4-202ENST00000394106 OR2M5A3KFT3 312 aa27.79■■■□□ 2.04
CMTM4-202ENST00000394106 SHISA8B8ZZ34 492 aa27.79■■■□□ 2.04
CMTM4-202ENST00000394106 H3BML4 177 aa27.79■■■□□ 2.04
CMTM4-202ENST00000394106 PEPDP12955 493 aa27.79■■■□□ 2.04
CMTM4-202ENST00000394106 RNF144AP50876 292 aaPredicted RBP27.79■■■□□ 2.04
CMTM4-202ENST00000394106 AGFG1P52594 562 aaKnown RBP27.79■■■□□ 2.04
CMTM4-202ENST00000394106 CASP9P55211 416 aa27.79■■■□□ 2.04
CMTM4-202ENST00000394106 BCL2A1Q16548 175 aa27.79■■■□□ 2.04
CMTM4-202ENST00000394106 HDXQ7Z353 690 aa27.79■■■□□ 2.04
CMTM4-202ENST00000394106 PIWIL2Q8TC59 973 aaKnown RBP27.79■■■□□ 2.04
CMTM4-202ENST00000394106 TREX2Q9BQ50 279 aaPredicted RBP27.79■■■□□ 2.04
CMTM4-202ENST00000394106 ZNF629Q9UEG4 869 aaPredicted RBP27.79■■■□□ 2.04
CMTM4-202ENST00000394106 DOCK7Q96N67 2140 aa27.79■■■□□ 2.04
CMTM4-202ENST00000394106 CD226Q15762 336 aa27.78■■■□□ 2.04
CMTM4-202ENST00000394106 GLYR1Q49A26 553 aaPredicted RBP27.78■■■□□ 2.04
CMTM4-202ENST00000394106 FLYWCH1Q4VC44 716 aa27.78■■■□□ 2.04
CMTM4-202ENST00000394106 SLC9B1Q4ZJI4 515 aa27.78■■■□□ 2.04
CMTM4-202ENST00000394106 CHMP1BQ7LBR1 199 aa27.78■■■□□ 2.04
CMTM4-202ENST00000394106 MAVSQ7Z434 540 aa27.78■■■□□ 2.04
CMTM4-202ENST00000394106 MEIOBQ8N635 442 aa27.78■■■□□ 2.04
CMTM4-202ENST00000394106 GOLGA6L1Q8N7Z2 621 aa27.78■■■□□ 2.04
CMTM4-202ENST00000394106 ZNF527Q8NB42 609 aa27.78■■■□□ 2.04
CMTM4-202ENST00000394106 SMPDL3BQ92485 455 aa27.78■■■□□ 2.04
CMTM4-202ENST00000394106 MARK4Q96L34 752 aa27.78■■■□□ 2.04
CMTM4-202ENST00000394106 HOXD1Q9GZZ0 328 aa27.78■■■□□ 2.04
CMTM4-202ENST00000394106 GPR45Q9Y5Y3 372 aa27.78■■■□□ 2.04
CMTM4-202ENST00000394106 A0A1W2PQD3 144 aa27.77■■■□□ 2.04
CMTM4-202ENST00000394106 SEC14L5O43304 696 aa27.77■■■□□ 2.04
CMTM4-202ENST00000394106 TMIGD3P0DMS9 266 aaPredicted RBP27.77■■■□□ 2.04
CMTM4-202ENST00000394106 UQCRC2P22695 453 aa27.77■■■□□ 2.04
CMTM4-202ENST00000394106 CTSSP25774 331 aa27.77■■■□□ 2.04
CMTM4-202ENST00000394106 POMZP3Q6PJE2 187 aa27.77■■■□□ 2.04
CMTM4-202ENST00000394106 ADGRE4PQ86SQ3 457 aa27.77■■■□□ 2.04
CMTM4-202ENST00000394106 GRAMD2AQ8IUY3 354 aa27.77■■■□□ 2.04
CMTM4-202ENST00000394106 MISPQ8IVT2 679 aa27.77■■■□□ 2.04
CMTM4-202ENST00000394106 DMRTC2Q8IXT2 367 aaPredicted RBP27.77■■■□□ 2.04
CMTM4-202ENST00000394106 GOT1L1Q8NHS2 421 aaPredicted RBP27.77■■■□□ 2.04
CMTM4-202ENST00000394106 PHOSPHO1Q8TCT1 267 aa27.77■■■□□ 2.04
CMTM4-202ENST00000394106 WNT2BQ93097 391 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms