RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 NTMQ9P121 344 aa17.56■□□□□ 0.4
CBX1-202ENST00000393408 PTGFRNQ9P2B2 879 aa17.56■□□□□ 0.4
CBX1-202ENST00000393408 ZFR2Q9UPR6 939 aaKnown RBP17.56■□□□□ 0.4
CBX1-202ENST00000393408 LOC102723532A0A0G2JNH3 316 aa17.56■□□□□ 0.4
CBX1-202ENST00000393408 C12orf71A8MTZ7 269 aa17.56■□□□□ 0.4
CBX1-202ENST00000393408 ISM1B1AKI9 464 aa17.56■□□□□ 0.4
CBX1-202ENST00000393408 C1QBP02746 253 aa17.56■□□□□ 0.4
CBX1-202ENST00000393408 POU2F2P09086 479 aa17.56■□□□□ 0.4
CBX1-202ENST00000393408 CMPK1P30085 196 aa17.56■□□□□ 0.4
CBX1-202ENST00000393408 MTNR1BP49286 362 aa17.56■□□□□ 0.4
CBX1-202ENST00000393408 ZNF136P52737 540 aa17.56■□□□□ 0.4
CBX1-202ENST00000393408 CST6Q15828 149 aa17.56■□□□□ 0.4
CBX1-202ENST00000393408 NIPAL3Q6P499 406 aa17.56■□□□□ 0.4
CBX1-202ENST00000393408 PLBD1Q6P4A8 553 aa17.56■□□□□ 0.4
CBX1-202ENST00000393408 ACBD7Q8N6N7 88 aa17.56■□□□□ 0.4
CBX1-202ENST00000393408 C12orf76Q8N812 135 aaPredicted RBP17.56■□□□□ 0.4
CBX1-202ENST00000393408 BRIX1Q8TDN6 353 aaKnown RBP17.56■□□□□ 0.4
CBX1-202ENST00000393408 SCN3AQ9NY46 2000 aa17.56■□□□□ 0.4
CBX1-202ENST00000393408 ORC5O43913 435 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 RNGTTO60942 597 aaKnown RBP17.55■□□□□ 0.4
CBX1-202ENST00000393408 INPP1P49441 399 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 CLDN2P57739 230 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 CSTF1Q05048 431 aaKnown RBP17.55■□□□□ 0.4
CBX1-202ENST00000393408 ZFPM2Q8WW38 1151 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 JPH3Q8WXH2 748 aaPredicted RBP17.55■□□□□ 0.4
CBX1-202ENST00000393408 PRSS27Q9BQR3 290 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 KCNN2Q9H2S1 579 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 BABAM2Q9NXR7 383 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 EXTL2Q9UBQ6 330 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 WDR45Q9Y484 360 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 CHD7Q9P2D1 2997 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 A0A0G2JMP0 313 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 A0A0X1KG70 313 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 UNC119BA6NIH7 251 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 CHRNB1P11230 501 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 ARSBP15848 533 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 FXYD6P3P58550 94 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 RRAS2P62070 204 aaPredicted RBP17.55■□□□□ 0.4
CBX1-202ENST00000393408 TNK1Q13470 666 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 PDGFRLQ15198 375 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 RPE65Q16518 533 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 TJAP1Q5JTD0 557 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 IDNKQ5T6J7 187 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 TMEM99Q8N816 258 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 KCT2Q8NC54 265 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 OR4M2Q8NGB6 313 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 WACQ9BTA9 647 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 ALG8Q9BVK2 526 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 C1QTNF2Q9BXJ5 285 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 OR52D1Q9H346 318 aa17.55■□□□□ 0.4
CBX1-202ENST00000393408 KRCC1Q9NPI7 259 aaPredicted RBP17.55■□□□□ 0.4
CBX1-202ENST00000393408 TBC1D3KA0A087X1G2 549 aa17.54■□□□□ 0.4
CBX1-202ENST00000393408 CENPVL1A0A0U1RR11 272 aa17.54■□□□□ 0.4
CBX1-202ENST00000393408 ZC3H12DA2A288 527 aaKnown RBP17.54■□□□□ 0.4
CBX1-202ENST00000393408 TBC1D3FA6NER0 549 aaPredicted RBP17.54■□□□□ 0.4
CBX1-202ENST00000393408 CPNE3O75131 537 aaKnown RBP17.54■□□□□ 0.4
CBX1-202ENST00000393408 AGR2O95994 175 aa17.54■□□□□ 0.4
CBX1-202ENST00000393408 WASP42768 502 aa17.54■□□□□ 0.4
CBX1-202ENST00000393408 VEGFBP49765 207 aa17.54■□□□□ 0.4
CBX1-202ENST00000393408 EEF1A1P68104 462 aaKnown RBP17.54■□□□□ 0.4
CBX1-202ENST00000393408 ARHGAP11BQ3KRB8 267 aa17.54■□□□□ 0.4
CBX1-202ENST00000393408 ZNF57Q68EA5 555 aaPredicted RBP17.54■□□□□ 0.4
CBX1-202ENST00000393408 HBMQ6B0K9 141 aa17.54■□□□□ 0.4
CBX1-202ENST00000393408 TBC1D3GQ6DHY5 549 aa17.54■□□□□ 0.4
CBX1-202ENST00000393408 MTSS1LQ765P7 747 aa17.54■□□□□ 0.4
CBX1-202ENST00000393408 MEPCEQ7L2J0 689 aaKnown RBP17.54■□□□□ 0.4
CBX1-202ENST00000393408 DGLUCYQ7Z3D6 616 aa17.54■□□□□ 0.4
CBX1-202ENST00000393408 PLCZ1Q86YW0 608 aa17.54■□□□□ 0.4
CBX1-202ENST00000393408 LRRC25Q8N386 305 aaPredicted RBP17.54■□□□□ 0.4
CBX1-202ENST00000393408 HDDC3Q8N4P3 179 aa17.54■□□□□ 0.4
CBX1-202ENST00000393408 SMARCD2Q92925 531 aa17.54■□□□□ 0.4
CBX1-202ENST00000393408 TRIM63Q969Q1 353 aa17.54■□□□□ 0.4
CBX1-202ENST00000393408 TRAF4Q9BUZ4 470 aaPredicted RBP17.54■□□□□ 0.4
CBX1-202ENST00000393408 MED20Q9H944 212 aa17.54■□□□□ 0.4
CBX1-202ENST00000393408 ZNF223Q9UK11 482 aaPredicted RBP17.54■□□□□ 0.4
CBX1-202ENST00000393408 SLC17A4Q9Y2C5 497 aa17.54■□□□□ 0.4
CBX1-202ENST00000393408 HRO43593 1189 aa17.53■□□□□ 0.4
CBX1-202ENST00000393408 PAICSP22234 425 aaKnown RBP17.53■□□□□ 0.4
CBX1-202ENST00000393408 AGFG1P52594 562 aaKnown RBP17.53■□□□□ 0.4
CBX1-202ENST00000393408 SNRPNP63162 240 aaKnown RBP17.53■□□□□ 0.4
CBX1-202ENST00000393408 VN1R4Q7Z5H5 301 aa17.53■□□□□ 0.4
CBX1-202ENST00000393408 OR5M3Q8NGP4 307 aa17.53■□□□□ 0.4
CBX1-202ENST00000393408 GAL3ST3Q96A11 431 aa17.53■□□□□ 0.4
CBX1-202ENST00000393408 NACC2Q96BF6 587 aa17.53■□□□□ 0.4
CBX1-202ENST00000393408 ART5Q96L15 291 aa17.53■□□□□ 0.4
CBX1-202ENST00000393408 DPH1Q9BZG8 443 aa17.53■□□□□ 0.4
CBX1-202ENST00000393408 RSPH9Q9H1X1 276 aaPredicted RBP17.53■□□□□ 0.4
CBX1-202ENST00000393408 FN3KQ9H479 309 aa17.53■□□□□ 0.4
CBX1-202ENST00000393408 RMI1Q9H9A7 625 aa17.53■□□□□ 0.4
CBX1-202ENST00000393408 CYSLTR2Q9NS75 346 aa17.53■□□□□ 0.4
CBX1-202ENST00000393408 MCUBQ9NWR8 336 aa17.53■□□□□ 0.4
CBX1-202ENST00000393408 ING3Q9NXR8 418 aa17.53■□□□□ 0.4
CBX1-202ENST00000393408 PHF11Q9UIL8 331 aa17.53■□□□□ 0.4
CBX1-202ENST00000393408 GPSM3Q9Y4H4 160 aa17.53■□□□□ 0.4
CBX1-202ENST00000393408 A0A1W2PP55 124 aa17.53■□□□□ 0.4
CBX1-202ENST00000393408 ZNF780AO75290 641 aaPredicted RBP17.53■□□□□ 0.4
CBX1-202ENST00000393408 FUT1P19526 365 aa17.53■□□□□ 0.4
CBX1-202ENST00000393408 C2orf27AQ580R0 203 aa17.53■□□□□ 0.4
CBX1-202ENST00000393408 PAQR7Q86WK9 346 aa17.53■□□□□ 0.4
CBX1-202ENST00000393408 FANK1Q8TC84 345 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms