RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 AMACRQ9UHK6 382 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 BTNL2Q9UIR0 455 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 RIMS3Q9UJD0 308 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 JPT1Q9UK76 154 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 PNMA2Q9UL42 364 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 L1RE1Q9UN81 338 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 MRPS2Q9Y399 296 aaKnown RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 CBY1Q9Y3M2 126 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 TMED3Q9Y3Q3 217 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 UGT2A1Q9Y4X1 527 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 SNX13Q9Y5W8 968 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 MAD1L1Q9Y6D9 718 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 COLEC10Q9Y6Z7 277 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 PRKDCP78527 4128 aaKnown RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 PCM1Q15154 2024 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 DLG5Q8TDM6 1919 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 COL6A5A8TX70 2615 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 PKD1P98161 4303 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 PXDNLA1KZ92 1463 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 TACC2O95359 2948 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 ALPK2Q86TB3 2170 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 FER1L5A0AVI2 2057 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 PHLDB1Q86UU1 1377 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 IGHV5-10-1A0A0J9YXX1 117 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 GOLGA6L10A0A0M3HER8 536 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 TTC26A0AVF1 554 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 CCDC162PA2VCL2 907 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 OR5H15A6NDH6 313 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 HELTA6NFD8 242 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 NPIPB15A6NHN6 443 aaPredicted RBP-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF716A6NP11 495 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 E7EWF7 191 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 NPIPA2E9PIF3 369 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 F5H0A9 414 aaPredicted RBP-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 NPIPA3F8WFD2 350 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 H0YIG0 161 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 FXYD1O00168 92 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 MFNGO00587 321 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 PEX12O00623 359 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 BPY2O14599 106 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 CCSO14618 274 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 DNALI1O14645 258 aaPredicted RBP-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 APOL1O14791 398 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 PSMA7O14818 248 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 RASGRF2O14827 1237 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 XPO1O14980 1071 aaKnown RBP-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 PMM2O15305 246 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 PLA2G10O15496 165 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 OGG1O15527 345 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 GUCY1B2O75343 617 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 MED24O75448 989 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 CREG1O75629 220 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 CRTAPO75718 401 aaPredicted RBP-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 SLC25A12O75746 678 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 CABYRO75952 493 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 FGF18O76093 207 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 YIF1AO95070 293 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 MFN2O95140 757 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 SCELO95171 688 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 PARNO95453 639 aaKnown RBP-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 GSRP00390 522 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 GH2P01242 217 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 IGLV2-23P01705 113 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 IGLV7-43P04211 117 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 HEXBP07686 556 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 FHP07954 510 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 PDGFRBP09619 1106 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 OR2T7P0C7T2 308 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF735P0CB33 412 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 ERGP11308 486 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 ACTN1P12814 892 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 SCG2P13521 617 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 ICAM2P13598 275 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 IGLL1P15814 213 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 IL7RP16871 459 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 VCLP18206 1134 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 VDAC1P21796 283 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 PAICSP22234 425 aaKnown RBP-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 OMGP23515 440 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 F2RP25116 425 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 CHMLP26374 656 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 PTBP1P26599 531 aaKnown RBP eCLIP-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 CD27P26842 260 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 LOXP28300 417 aaPredicted RBP-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 PEX2P28328 305 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 NMBRP28336 390 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 AQP1P29972 269 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 DUTP33316 252 aaKnown RBP-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 COPB2P35606 906 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 CPOXP36551 454 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 RPL4P36578 427 aaKnown RBP-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 SLC26A3P40879 764 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 GALR1P47211 349 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 TDO2P48775 406 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 SERPINB8P50452 374 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 ARFIP1P53367 373 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 CLDN17P56750 224 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 BACE1P56817 501 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 RWDD2BP57060 319 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 TAS2R19P59542 299 aa-0.53□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms