RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 DCNP07585 359 aaKnown RBP13.2□□□□□ -0.3
SNPH-201ENST00000381867 TPT1P13693 172 aaKnown RBP13.2□□□□□ -0.3
SNPH-201ENST00000381867 TNFRSF1BP20333 461 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 ITGB7P26010 798 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 BDKRB2P30411 391 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 BCL2A1Q16548 175 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 B3GNT7Q8NFL0 401 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 LRRC46Q96FV0 321 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 PELOQ9BRX2 385 aaKnown RBP13.2□□□□□ -0.3
SNPH-201ENST00000381867 GSTO2Q9H4Y5 243 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 KCNK13Q9HB14 408 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 PDE7BQ9NP56 450 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 RAB3DO95716 219 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 CHRNB1P11230 501 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 HOXB9P17482 250 aaPredicted RBP13.2□□□□□ -0.3
SNPH-201ENST00000381867 SSTR4P31391 388 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 SPINT3P49223 89 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 AWAT2Q6E213 333 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 APCDD1Q8J025 514 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 OR5T1Q8NG75 326 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 OR14A2Q96R54 314 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 LMF1Q96S06 567 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 VRK1Q99986 396 aaPredicted RBP13.2□□□□□ -0.3
SNPH-201ENST00000381867 HEBP1Q9NRV9 189 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 RIMS3Q9UJD0 308 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 DNMT3AQ9Y6K1 912 aaPredicted RBP13.2□□□□□ -0.3
SNPH-201ENST00000381867 RNF215Q9Y6U7 377 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 OR6C6A6NF89 314 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 SNAPINO95295 136 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 JUNDP17535 347 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 CTHP32929 405 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 EMX1Q04741 257 aaPredicted RBP13.2□□□□□ -0.3
SNPH-201ENST00000381867 MANEALQ5VSG8 457 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 SLC35F2Q8IXU6 374 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 UTP4Q969X6 686 aaKnown RBP13.2□□□□□ -0.3
SNPH-201ENST00000381867 LOC105369274A0A096LPK9 316 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 A0A1W2PQ09 198 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 SCO2O43819 266 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 AKAIN1P0CW23 69 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 KCNJ8Q15842 424 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 CPZQ66K79 652 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 OR4N4Q8N0Y3 316 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 PARP16Q8N5Y8 322 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 NPWQ8N729 165 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 CCDC71LQ8N9Z2 235 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 FAM83FQ8NEG4 500 aaPredicted RBP13.2□□□□□ -0.3
SNPH-201ENST00000381867 OR1J4Q8NGS1 313 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 HAVCR2Q8TDQ0 301 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 KCNJ16Q9NPI9 418 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 ZNF705FA8MVS1 300 aaPredicted RBP13.19□□□□□ -0.3
SNPH-201ENST00000381867 ATG12O94817 140 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 SLC34A2O95436 690 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 ZNF705DP0CH99 300 aaPredicted RBP13.19□□□□□ -0.3
SNPH-201ENST00000381867 ZNF705BP0CI00 300 aaPredicted RBP13.19□□□□□ -0.3
SNPH-201ENST00000381867 C6P13671 934 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 GPX3P22352 226 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 RBMS1P29558 406 aaKnown RBP13.19□□□□□ -0.3
SNPH-201ENST00000381867 RAB4BP61018 213 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 PLCXD2Q0VAA5 305 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 NAGSQ8N159 534 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 SAMD8Q96LT4 415 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 TGM7Q96PF1 710 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 ZNF300Q96RE9 604 aaPredicted RBP13.19□□□□□ -0.3
SNPH-201ENST00000381867 CNOT2Q9NZN8 540 aaKnown RBP13.19□□□□□ -0.3
SNPH-201ENST00000381867 FTSJ1Q9UET6 329 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 LSM5Q9Y4Y9 91 aaKnown RBP13.19□□□□□ -0.3
SNPH-201ENST00000381867 DUX1O43812 170 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 SYNGR4O95473 234 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 SYPP08247 313 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 TLE3Q04726 772 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 C18orf21Q32NC0 220 aaPredicted RBP13.19□□□□□ -0.3
SNPH-201ENST00000381867 HNRNPA1L2Q32P51 320 aaKnown RBP13.19□□□□□ -0.3
SNPH-201ENST00000381867 HSF5Q4G112 596 aaPredicted RBP13.19□□□□□ -0.3
SNPH-201ENST00000381867 DEFB134Q4QY38 66 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 OR56B2PQ8NGI1 322 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 OR5D16Q8NGK9 328 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 GPR150Q8NGU9 434 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 C19orf12Q9NSK7 152 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 FAM86C1Q9NVL1 165 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 BTNL2Q9UIR0 455 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 B4GAT1O43505 415 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 CXCL10P02778 98 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 CD6P30203 668 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 POU3F4P49335 361 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 INHBCP55103 352 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 SELENOVP59797 346 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 CSNK2A1P68400 391 aaPredicted RBP13.19□□□□□ -0.3
SNPH-201ENST00000381867 SPCS2Q15005 226 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 RANBP10Q6VN20 620 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 ZNF611Q8N823 705 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 CSNK2A3Q8NEV1 391 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 APIPQ96GX9 242 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 MTHFD2LQ9H903 347 aaPredicted RBP13.19□□□□□ -0.3
SNPH-201ENST00000381867 KLHL42Q9P2K6 505 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 ZNF225Q9UK10 706 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 SLC16A8O95907 504 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 FOSL1P15407 271 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 CHATP28329 748 aa13.19□□□□□ -0.3
SNPH-201ENST00000381867 RPS15AP62244 130 aaKnown RBP13.19□□□□□ -0.3
SNPH-201ENST00000381867 NKPD1Q17RQ9 610 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms