RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 NPIPA3F8WFD2 350 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 SCDO00767 359 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 SEMA7AO75326 666 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 SOX30O94993 753 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 ANGPTL1O95841 491 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 AGR2O95994 175 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 IGHG3P01860 377 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 TBXA2RP21731 343 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 ANXA11P50995 505 aaKnown RBP17.66■□□□□ 0.42
GTF3A-201ENST00000381140 GPR68Q15743 365 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 C3AR1Q16581 482 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 FLYWCH1Q4VC44 716 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 WIPI1Q5MNZ9 446 aaPredicted RBP17.66■□□□□ 0.42
GTF3A-201ENST00000381140 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.66■□□□□ 0.42
GTF3A-201ENST00000381140 RINLQ6ZS11 566 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 FJX1Q86VR8 437 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 CHERPQ8IWX8 916 aaKnown RBP17.66■□□□□ 0.42
GTF3A-201ENST00000381140 RBM15BQ8NDT2 890 aaKnown RBP17.66■□□□□ 0.42
GTF3A-201ENST00000381140 ZFP90Q8TF47 636 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 DUSP19Q8WTR2 217 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 RCN3Q96D15 328 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 BTBD10Q9BSF8 475 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 PAIP1Q9H074 479 aaKnown RBP17.66■□□□□ 0.42
GTF3A-201ENST00000381140 UBQLN3Q9H347 655 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 DSN1Q9H410 356 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 EFCAB1Q9HAE3 211 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 PLSCR2Q9NRY7 297 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 QPCTLQ9NXS2 382 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 TAS2R1Q9NYW7 299 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 MED11Q9P086 117 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 DKKL1Q9UK85 242 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 NDUFAF1Q9Y375 327 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 C15orf38-AP3S2A0A0A6YYH1 394 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 A0A1W2PP18 115 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 FBP2O00757 339 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 LRRTM2O43300 516 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 NDUFB5O43674 189 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 CBR3O75828 277 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 ZIC2O95409 532 aaPredicted RBP17.66■□□□□ 0.42
GTF3A-201ENST00000381140 AK1P00568 194 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 ZCCHC18P0CG32 403 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 LCN1P31025 176 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 CPOXP36551 454 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 DCTP40126 519 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 CRATP43155 626 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 DNAL1Q4LDG9 190 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 GPAT3Q53EU6 434 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 EIPR1Q53HC9 387 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 PAGE3Q5JUK9 113 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 REP15Q6BDI9 236 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 C3P1Q6ZMU1 363 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 FAM83FQ8NEG4 500 aaPredicted RBP17.66■□□□□ 0.42
GTF3A-201ENST00000381140 OR14L1PQ8NHC6 308 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 ROPN1LQ96C74 230 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 TPT1P8Q9HAU6 139 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 SLC6A5Q9Y345 797 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 PCDHB14Q9Y5E9 798 aa17.66■□□□□ 0.42
GTF3A-201ENST00000381140 PCNX1Q96RV3 2341 aa17.65■□□□□ 0.42
GTF3A-201ENST00000381140 FLNCQ14315 2725 aa17.65■□□□□ 0.42
GTF3A-201ENST00000381140 A0A096LPI6 279 aa17.65■□□□□ 0.42
GTF3A-201ENST00000381140 HMGN4O00479 90 aa17.65■□□□□ 0.42
GTF3A-201ENST00000381140 PRRG2O14669 202 aa17.65■□□□□ 0.42
GTF3A-201ENST00000381140 ANGPT2O15123 496 aa17.65■□□□□ 0.42
GTF3A-201ENST00000381140 STX11O75558 287 aa17.65■□□□□ 0.42
GTF3A-201ENST00000381140 HPNP05981 417 aa17.65■□□□□ 0.42
GTF3A-201ENST00000381140 STSP08842 583 aa17.65■□□□□ 0.42
GTF3A-201ENST00000381140 HPCAP84074 193 aa17.65■□□□□ 0.42
GTF3A-201ENST00000381140 MXRA7P84157 204 aa17.65■□□□□ 0.42
GTF3A-201ENST00000381140 SRSF1Q07955 248 aaKnown RBP eCLIP17.65■□□□□ 0.42
GTF3A-201ENST00000381140 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.65■□□□□ 0.422e-7■■■□□ 17.2
GTF3A-201ENST00000381140 ARHGAP11BQ3KRB8 267 aa17.65■□□□□ 0.42
GTF3A-201ENST00000381140 HACD2Q6Y1H2 254 aa17.65■□□□□ 0.42
GTF3A-201ENST00000381140 CD163Q86VB7 1156 aa17.65■□□□□ 0.42
GTF3A-201ENST00000381140 CHDHQ8NE62 594 aaPredicted RBP17.65■□□□□ 0.42
GTF3A-201ENST00000381140 OR2M3Q8NG83 312 aa17.65■□□□□ 0.42
GTF3A-201ENST00000381140 OR5M9Q8NGP3 310 aa17.65■□□□□ 0.42
GTF3A-201ENST00000381140 FBXO27Q8NI29 283 aa17.65■□□□□ 0.42
GTF3A-201ENST00000381140 FAM57AQ8TBR7 257 aa17.65■□□□□ 0.42
GTF3A-201ENST00000381140 SH3YL1Q96HL8 342 aaPredicted RBP17.65■□□□□ 0.42
GTF3A-201ENST00000381140 ACKR4Q9NPB9 350 aa17.65■□□□□ 0.42
GTF3A-201ENST00000381140 NDE1Q9NXR1 346 aa17.65■□□□□ 0.42
GTF3A-201ENST00000381140 SLAMF8Q9P0V8 285 aa17.65■□□□□ 0.42
GTF3A-201ENST00000381140 SPRR3Q9UBC9 169 aa17.65■□□□□ 0.42
GTF3A-201ENST00000381140 ERRFI1Q9UJM3 462 aaPredicted RBP17.65■□□□□ 0.42
GTF3A-201ENST00000381140 LEF1Q9UJU2 399 aaPredicted RBP17.65■□□□□ 0.42
GTF3A-201ENST00000381140 ACAD8Q9UKU7 415 aa17.65■□□□□ 0.42
GTF3A-201ENST00000381140 MKLN1Q9UL63 735 aa17.65■□□□□ 0.42
GTF3A-201ENST00000381140 SLC5A6Q9Y289 635 aa17.65■□□□□ 0.42
GTF3A-201ENST00000381140 ZNF835Q9Y2P0 537 aa17.65■□□□□ 0.42
GTF3A-201ENST00000381140 HEATR5AQ86XA9 2040 aa17.64■□□□□ 0.41
GTF3A-201ENST00000381140 CFAP73A6NFT4 308 aa17.64■□□□□ 0.41
GTF3A-201ENST00000381140 B4DXG7 233 aa17.64■□□□□ 0.41
GTF3A-201ENST00000381140 ALG1L2C9J202 215 aa17.64■□□□□ 0.41
GTF3A-201ENST00000381140 CCL21O00585 134 aa17.64■□□□□ 0.41
GTF3A-201ENST00000381140 AQP7O14520 342 aa17.64■□□□□ 0.41
GTF3A-201ENST00000381140 ADAM10O14672 748 aa17.64■□□□□ 0.41
GTF3A-201ENST00000381140 MRASO14807 208 aa17.64■□□□□ 0.41
GTF3A-201ENST00000381140 AIM2O14862 343 aa17.64■□□□□ 0.41
GTF3A-201ENST00000381140 GYG2O15488 501 aa17.64■□□□□ 0.41
GTF3A-201ENST00000381140 SUSD5O60279 629 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms