RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 PRKAR1AP10644 381 aa15.18■□□□□ 0.02
NKX3-1-201ENST00000380871 ERGP11308 486 aa15.18■□□□□ 0.02
NKX3-1-201ENST00000380871 ARSBP15848 533 aa15.18■□□□□ 0.02
NKX3-1-201ENST00000380871 RPS21P63220 83 aaKnown RBP15.18■□□□□ 0.02
NKX3-1-201ENST00000380871 OR51G2Q8NGK0 314 aa15.18■□□□□ 0.02
NKX3-1-201ENST00000380871 LCN9Q8WX39 176 aa15.18■□□□□ 0.02
NKX3-1-201ENST00000380871 DIO2Q92813 273 aa15.18■□□□□ 0.02
NKX3-1-201ENST00000380871 QRFPRQ96P65 431 aa15.18■□□□□ 0.02
NKX3-1-201ENST00000380871 APOOQ9BUR5 198 aa15.18■□□□□ 0.02
NKX3-1-201ENST00000380871 SLC38A1Q9H2H9 487 aa15.18■□□□□ 0.02
NKX3-1-201ENST00000380871 ACSL5Q9ULC5 683 aa15.18■□□□□ 0.02
NKX3-1-201ENST00000380871 HSPB11Q9Y547 144 aa15.18■□□□□ 0.02
NKX3-1-201ENST00000380871 CACNB4O00305 520 aaPredicted RBP15.18■□□□□ 0.02
NKX3-1-201ENST00000380871 CDC42EP2O14613 210 aa15.18■□□□□ 0.02
NKX3-1-201ENST00000380871 SURF4O15260 269 aa15.18■□□□□ 0.02
NKX3-1-201ENST00000380871 TBXA2RP21731 343 aa15.18■□□□□ 0.02
NKX3-1-201ENST00000380871 SNRPNP63162 240 aaKnown RBP15.18■□□□□ 0.02
NKX3-1-201ENST00000380871 TSPAN31Q12999 210 aa15.18■□□□□ 0.02
NKX3-1-201ENST00000380871 IDNKQ5T6J7 187 aa15.18■□□□□ 0.02
NKX3-1-201ENST00000380871 AADACL4Q5VUY2 407 aa15.18■□□□□ 0.02
NKX3-1-201ENST00000380871 POGLUT1Q8NBL1 392 aa15.18■□□□□ 0.02
NKX3-1-201ENST00000380871 OR9A2Q8NGT5 310 aa15.18■□□□□ 0.02
NKX3-1-201ENST00000380871 SMAP2Q8WU79 429 aaPredicted RBP15.18■□□□□ 0.02
NKX3-1-201ENST00000380871 TBC1D29Q9UFV1 150 aa15.18■□□□□ 0.02
NKX3-1-201ENST00000380871 K7EQS6 105 aa15.17■□□□□ 0.02
NKX3-1-201ENST00000380871 LAMP2P13473 410 aa15.17■□□□□ 0.02
NKX3-1-201ENST00000380871 GSTM3P21266 225 aa15.17■□□□□ 0.02
NKX3-1-201ENST00000380871 NTSP30990 170 aa15.17■□□□□ 0.02
NKX3-1-201ENST00000380871 AHRP35869 848 aa15.17■□□□□ 0.02
NKX3-1-201ENST00000380871 ACTR1BP42025 376 aa15.17■□□□□ 0.02
NKX3-1-201ENST00000380871 INPP1P49441 399 aa15.17■□□□□ 0.02
NKX3-1-201ENST00000380871 PPM1FP49593 454 aaPredicted RBP15.17■□□□□ 0.02
NKX3-1-201ENST00000380871 ACTR1AP61163 376 aa15.17■□□□□ 0.02
NKX3-1-201ENST00000380871 BTN3A2P78410 334 aa15.17■□□□□ 0.02
NKX3-1-201ENST00000380871 TJAP1Q5JTD0 557 aa15.17■□□□□ 0.02
NKX3-1-201ENST00000380871 RRM2BQ7LG56 351 aa15.17■□□□□ 0.02
NKX3-1-201ENST00000380871 SHISA5Q8N114 240 aa15.17■□□□□ 0.02
NKX3-1-201ENST00000380871 DNAJC5GQ8N7S2 189 aa15.17■□□□□ 0.02
NKX3-1-201ENST00000380871 GNPDA2Q8TDQ7 276 aa15.17■□□□□ 0.02
NKX3-1-201ENST00000380871 SLC6A20Q9NP91 592 aa15.17■□□□□ 0.02
NKX3-1-201ENST00000380871 CLDN20P56880 219 aa15.17■□□□□ 0.02
NKX3-1-201ENST00000380871 SLC9A5Q14940 896 aa15.17■□□□□ 0.02
NKX3-1-201ENST00000380871 MRGPREQ86SM8 312 aa15.17■□□□□ 0.02
NKX3-1-201ENST00000380871 ZNF761Q86XN6 746 aaPredicted RBP15.17■□□□□ 0.02
NKX3-1-201ENST00000380871 SFTPA2Q8IWL1 248 aa15.17■□□□□ 0.02
NKX3-1-201ENST00000380871 OR7D2Q96RA2 312 aa15.17■□□□□ 0.02
NKX3-1-201ENST00000380871 BTBD1Q9H0C5 482 aa15.17■□□□□ 0.02
NKX3-1-201ENST00000380871 BCL2L10Q9HD36 194 aa15.17■□□□□ 0.02
NKX3-1-201ENST00000380871 HINT3Q9NQE9 182 aaKnown RBP15.17■□□□□ 0.02
NKX3-1-201ENST00000380871 EXTL2Q9UBQ6 330 aa15.17■□□□□ 0.02
NKX3-1-201ENST00000380871 TSC22D2O75157 780 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 AIFM1O95831 613 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 ADH1BP00325 375 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 EGFP01133 1207 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 ERP29P30040 261 aaKnown RBP15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 RPE65Q16518 533 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 MZT2BQ6NZ67 158 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 SMARCD3Q6STE5 483 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 CPOQ8IVL8 374 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 ACOT4Q8N9L9 421 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 DUSP18Q8NEJ0 188 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 GRPEL2Q8TAA5 225 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 SIPA1Q96FS4 1042 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 KCNJ15Q99712 375 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 HDHD2Q9H0R4 259 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 C2orf16Q68DN1 1984 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 CENPVL1A0A0U1RR11 272 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 OR10A3P58181 314 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 ARHGAP19Q14CB8 494 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 C6orf132Q5T0Z8 1188 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 RASSF6Q6ZTQ3 369 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 PEX5LQ8IYB4 626 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 PATE1Q8WXA2 126 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 PINK1Q9BXM7 581 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 PCBD2Q9H0N5 130 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 KLHL21Q9UJP4 597 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 CBLCQ9ULV8 474 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 HLA-DPB1P04440 258 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 ACSL1P33121 698 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 ADPRHP54922 357 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 RRAS2P62070 204 aaPredicted RBP15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 HYAL1Q12794 435 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 TRILQ7L0X0 811 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 SAMD8Q96LT4 415 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 SPATA5L1Q9BVQ7 753 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 ENKD1Q9H0I2 346 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 TAS2R7Q9NYW3 318 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 PCDHGB7Q9Y5F8 929 aa15.16■□□□□ 0.02
NKX3-1-201ENST00000380871 SNTNA6NMZ2 147 aa15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 MEN1O00255 615 aa15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 HYAL3O43820 417 aaPredicted RBP15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 AKAP8O43823 692 aaKnown RBP15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 OR2B3O76000 313 aa15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 ASGR2P07307 311 aa15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 NTSR1P30989 418 aa15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 PDX1P52945 283 aa15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 TRAM2Q15035 370 aa15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 MLC1Q15049 377 aa15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 RNASE12Q5GAN4 147 aaKnown RBP15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 ZNF322Q6U7Q0 402 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms