RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 CLDN22Q8N7P3 220 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 Q8N9G6 341 aaPredicted RBP11.74□□□□□ -0.53
VPS16-202ENST00000380445 SUN5Q8TC36 379 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 ADAMTS18Q8TE60 1221 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 FGF11Q92914 225 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 ANKRD9Q96BM1 317 aaPredicted RBP11.74□□□□□ -0.53
VPS16-202ENST00000380445 UCK1Q9HA47 277 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 LMAN1LQ9HAT1 526 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 FAM60AQ9NP50 221 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 SEC14L4Q9UDX3 406 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 TESQ9UGI8 421 aaKnown RBP11.74□□□□□ -0.53
VPS16-202ENST00000380445 SLC7A7Q9UM01 511 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 IGHV1OR15-9A0A0B4J2B8 117 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 HYKKA2RU49 373 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 TAF4O00268 1085 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 FMO6PO60774 539 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 RDH16O75452 317 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 CSF2P04141 144 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 CKMT1AP12532 417 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 MAP3K8P41279 467 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 MAP4K2Q12851 820 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 ZNHIT3Q15649 155 aaPredicted RBP11.73□□□□□ -0.53
VPS16-202ENST00000380445 C3orf38Q5JPI3 329 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 BCDIN3DQ7Z5W3 292 aaKnown RBP11.73□□□□□ -0.53
VPS16-202ENST00000380445 NRMQ8IXM6 262 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 VWA5B2Q8N398 1253 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 SPERTQ8NA61 448 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 LSM14AQ8ND56 463 aaKnown RBP11.73□□□□□ -0.53
VPS16-202ENST00000380445 OR52I1Q8NGK6 324 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 TCTN2Q96GX1 697 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 ORAI3Q9BRQ5 295 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 C6orf62Q9GZU0 229 aaPredicted RBP11.73□□□□□ -0.53
VPS16-202ENST00000380445 MARCH7Q9H992 704 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 STARD5Q9NSY2 213 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 CLEC2DQ9UHP7 191 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 LOC105371267A0A1B0GV96 52 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 CHST10O43529 356 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 HMGN1P05114 100 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 RNH1P13489 461 aaKnown RBP11.73□□□□□ -0.53
VPS16-202ENST00000380445 CD27P26842 260 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 GABRA3P34903 492 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 ZNF136P52737 540 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 MGAT2Q10469 447 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 MINDY4Q4G0A6 757 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.73□□□□□ -0.53
VPS16-202ENST00000380445 OR9A4Q8NGU2 314 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 PIK3R3Q92569 461 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 FGF20Q9NP95 211 aaPredicted RBP11.73□□□□□ -0.53
VPS16-202ENST00000380445 C14orf105Q9NVL8 296 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 PEX16Q9Y5Y5 336 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 CDHR4A6H8M9 788 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 SAGE2PA6NJ88 616 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 CENPBD1B2RD01 187 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 DSCR3O14972 297 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 BRINP1O60477 761 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 NKX2-2O95096 273 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 GUSBP08236 651 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 CD38P28907 300 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 EXOSC7Q15024 291 aaKnown RBP11.73□□□□□ -0.53
VPS16-202ENST00000380445 SSX1Q16384 188 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 PRTGQ2VWP7 1150 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 MRPL2Q5T653 305 aaKnown RBP11.73□□□□□ -0.53
VPS16-202ENST00000380445 GRAMD2AQ8IUY3 354 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 OR8D4Q8NGM9 314 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 TMEM255BQ8WV15 326 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 RLN3Q8WXF3 142 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 RBM18Q96H35 190 aaKnown RBP11.73□□□□□ -0.53
VPS16-202ENST00000380445 TP63Q9H3D4 680 aaPredicted RBP11.73□□□□□ -0.53
VPS16-202ENST00000380445 HHATLQ9HCP6 504 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 CDH10Q9Y6N8 788 aa11.73□□□□□ -0.53
VPS16-202ENST00000380445 SLC9B1P1A6NJY1 282 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 KDM4EB2RXH2 506 aaPredicted RBP11.72□□□□□ -0.53
VPS16-202ENST00000380445 KLF4O43474 513 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 THY1P04216 161 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 PRKACBP22694 351 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 MTNR1AP48039 350 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 ZNF45Q02386 682 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 ZNF155Q12901 538 aaPredicted RBP11.72□□□□□ -0.53
VPS16-202ENST00000380445 MAPK14Q16539 360 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 DEFB110Q30KQ9 67 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 ZNF620Q6ZNG0 422 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 GALNT12Q8IXK2 581 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 CDK20Q8IZL9 346 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 OR2T33Q8NG76 320 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 HOXB13Q92826 284 aaPredicted RBP11.72□□□□□ -0.53
VPS16-202ENST00000380445 MED30Q96HR3 178 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 CDADC1Q9BWV3 514 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 TPSD1Q9BZJ3 242 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 PCED1AQ9H1Q7 454 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 MOV10Q9HCE1 1003 aaKnown RBP11.72□□□□□ -0.53
VPS16-202ENST00000380445 STUB1Q9UNE7 303 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 NTNG1Q9Y2I2 539 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 MRPS17Q9Y2R5 130 aaKnown RBP11.72□□□□□ -0.53
VPS16-202ENST00000380445 EXOSC1Q9Y3B2 195 aaKnown RBP11.72□□□□□ -0.53
VPS16-202ENST00000380445 SZT2Q5T011 3432 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 PNMA8CA0A1B0GUJ8 204 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 CLDN4O14493 209 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 CT62P0C5K7 136 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 NME1P15531 152 aaKnown RBP11.72□□□□□ -0.53
VPS16-202ENST00000380445 GNSP15586 552 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms