RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 DSTNP60981 165 aa7.19□□□□□ -1.26
CDKL5-202ENST00000379996 PPP1CAP62136 330 aa7.19□□□□□ -1.26
CDKL5-202ENST00000379996 TGM3Q08188 693 aa7.19□□□□□ -1.26
CDKL5-202ENST00000379996 FAM53BQ14153 422 aa7.19□□□□□ -1.26
CDKL5-202ENST00000379996 STPG1Q5TH74 334 aa7.19□□□□□ -1.26
CDKL5-202ENST00000379996 IGF2-ASQ6U949 168 aa7.19□□□□□ -1.26
CDKL5-202ENST00000379996 SPPL2AQ8TCT8 520 aa7.19□□□□□ -1.26
CDKL5-202ENST00000379996 ADAMTS18Q8TE60 1221 aa7.19□□□□□ -1.26
CDKL5-202ENST00000379996 UCN3Q969E3 161 aa7.19□□□□□ -1.26
CDKL5-202ENST00000379996 LIN37Q96GY3 246 aaPredicted RBP7.19□□□□□ -1.26
CDKL5-202ENST00000379996 Q96MT0 163 aa7.19□□□□□ -1.26
CDKL5-202ENST00000379996 MAP3K3Q99759 626 aa7.19□□□□□ -1.26
CDKL5-202ENST00000379996 CTRCQ99895 268 aa7.19□□□□□ -1.26
CDKL5-202ENST00000379996 SYNPO2LQ9H987 977 aa7.19□□□□□ -1.26
CDKL5-202ENST00000379996 SIAEQ9HAT2 523 aa7.19□□□□□ -1.26
CDKL5-202ENST00000379996 C3orf14Q9HBI5 128 aa7.19□□□□□ -1.26
CDKL5-202ENST00000379996 SH3BP4Q9P0V3 963 aa7.19□□□□□ -1.26
CDKL5-202ENST00000379996 IGHV5-51A0A0C4DH38 117 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 A0A1W2PRB8 838 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 SYNDIG1LA6NDD5 238 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 EFCAB10A6NFE3 127 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 OR1F1O43749 312 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 MPZL2O60487 215 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 ENTPD6O75354 484 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 SH3BGRLO75368 114 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 CTSBP07858 339 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 OSMP13725 252 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 GFERP55789 205 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 RGS1Q08116 209 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 C2orf80Q0P641 193 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 CEBPEQ15744 281 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 GLYR1Q49A26 553 aaPredicted RBP7.18□□□□□ -1.26
CDKL5-202ENST00000379996 MEDAGQ5VYS4 303 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 REEP3Q6NUK4 255 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 TRIM40Q6P9F5 258 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 NATD1Q8N6N6 113 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 NANOGP1Q8N7R0 232 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 RGMAQ96B86 450 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 GPA33Q99795 319 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 LYRM4Q9HD34 91 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 AMBNQ9NP70 447 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 CHST2Q9Y4C5 530 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 PCDHGB6Q9Y5F9 930 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 GNG14A0A1W2PPG7 69 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 FAM221AA4D161 298 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 HTR3EA5X5Y0 456 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 RGS13O14921 159 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 NDUFS4O43181 175 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 TMPRSS11DO60235 418 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 KIAA0513O60268 411 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 GADD45GO95257 159 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 SLC35G6P0C7Q6 338 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 FGF5P12034 268 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 CASP3P42574 277 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 CDK5Q00535 292 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 IL1RL1Q01638 556 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 ACY1Q03154 408 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 TNP2Q05952 138 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 IL11RAQ14626 422 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 KCNJ8Q15842 424 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 MFSD4BQ5TF39 518 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 ABHD17CQ6PCB6 329 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 ABHD13Q7L211 337 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 TMPRSS9Q7Z410 1059 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 RBM45Q8IUH3 476 aaKnown RBP7.18□□□□□ -1.26
CDKL5-202ENST00000379996 BMPERQ8N8U9 685 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 KBTBD8Q8NFY9 601 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 OR5P2Q8WZ92 322 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 ZNF501Q96CX3 271 aaPredicted RBP7.18□□□□□ -1.26
CDKL5-202ENST00000379996 ZNF354BQ96LW1 612 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 GFM1Q96RP9 751 aaKnown RBP7.18□□□□□ -1.26
CDKL5-202ENST00000379996 RACGAP1Q9H0H5 632 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 PRDM7Q9NQW5 492 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 RXFP3Q9NSD7 469 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 LYARQ9NX58 379 aaKnown RBP7.18□□□□□ -1.26
CDKL5-202ENST00000379996 NPAP1Q9NZP6 1156 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 CAB39Q9Y376 341 aaPredicted RBP7.18□□□□□ -1.26
CDKL5-202ENST00000379996 MDC1Q14676 2089 aaKnown RBP7.18□□□□□ -1.26
CDKL5-202ENST00000379996 HYKKA2RU49 373 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 SLC9B1P1A6NJY1 282 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 GAAP10253 952 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 DBTP11182 482 aaKnown RBP7.18□□□□□ -1.26
CDKL5-202ENST00000379996 TYRP1P17643 537 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 OLR1P78380 273 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 EIF3IQ13347 325 aaKnown RBP7.18□□□□□ -1.26
CDKL5-202ENST00000379996 GPR50Q13585 617 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 GANABQ14697 944 aaKnown RBP7.18□□□□□ -1.26
CDKL5-202ENST00000379996 TCEA2Q15560 299 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 ATAD3BQ5T9A4 648 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 NKAIN2Q5VXU1 208 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 NUDT13Q86X67 352 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 ZNF761Q86XN6 746 aaPredicted RBP7.18□□□□□ -1.26
CDKL5-202ENST00000379996 KIF18BQ86Y91 864 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 MCATQ8IVS2 390 aaKnown RBP7.18□□□□□ -1.26
CDKL5-202ENST00000379996 C2orf73Q8N5S3 287 aaPredicted RBP7.18□□□□□ -1.26
CDKL5-202ENST00000379996 AMER3Q8N944 861 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 UTP15Q8TED0 518 aaKnown RBP7.18□□□□□ -1.26
CDKL5-202ENST00000379996 RERGQ96A58 199 aaPredicted RBP7.18□□□□□ -1.26
CDKL5-202ENST00000379996 TMEM19Q96HH6 336 aa7.18□□□□□ -1.26
CDKL5-202ENST00000379996 FRMD6Q96NE9 622 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms