RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 GSTM5P46439 218 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 ALDH9A1P49189 494 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 CCL11P51671 97 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 PCBP3P57721 371 aaKnown RBP11.51□□□□□ -0.57
VRK3-202ENST00000377011 HBA1P69905 142 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 MC1RQ01726 317 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 SPIBQ01892 262 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 SLBPQ14493 270 aaKnown RBP eCLIP11.51□□□□□ -0.57
VRK3-202ENST00000377011 IRF3Q14653 427 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 ZNF181Q2M3W8 571 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 ZNF404Q494X3 552 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 ZNF385BQ569K4 471 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 NXPE4Q6UWF7 544 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 ZNF367Q7RTV3 350 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 VN1R5Q7Z5H4 357 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 ZNF605Q86T29 641 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 ZBTB46Q86UZ6 589 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 LGI4Q8N135 537 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 SLC5A8Q8N695 610 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 MFSD9Q8NBP5 474 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 MCFD2Q8NI22 146 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 STT3BQ8TCJ2 826 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 C16orf78Q8WTQ4 265 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 C8orf44Q96CB5 159 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 MMABQ96EY8 250 aaPredicted RBP11.51□□□□□ -0.57
VRK3-202ENST00000377011 ZNF764Q96H86 408 aaPredicted RBP11.51□□□□□ -0.57
VRK3-202ENST00000377011 RACGAP1Q9H0H5 632 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 DCSTAMPQ9H295 470 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 ZNF304Q9HCX3 659 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 GPATCH2Q9NW75 528 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 HS3ST3B1Q9Y662 390 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 EFCAB10A6NFE3 127 aa11.5□□□□□ -0.57
VRK3-202ENST00000377011 SOCS6O14544 535 aa11.5□□□□□ -0.57
VRK3-202ENST00000377011 MAN1A2O60476 641 aa11.5□□□□□ -0.57
VRK3-202ENST00000377011 RHCEP18577 417 aa11.5□□□□□ -0.57
VRK3-202ENST00000377011 SERPINB1P30740 379 aa11.5□□□□□ -0.57
VRK3-202ENST00000377011 FOLR3P41439 243 aa11.5□□□□□ -0.57
VRK3-202ENST00000377011 PRIM2P49643 509 aa11.5□□□□□ -0.57
VRK3-202ENST00000377011 CCR8P51685 355 aa11.5□□□□□ -0.57
VRK3-202ENST00000377011 RPS15AP62244 130 aaKnown RBP11.5□□□□□ -0.57
VRK3-202ENST00000377011 CDK6Q00534 326 aa11.5□□□□□ -0.57
VRK3-202ENST00000377011 REEP5Q00765 189 aa11.5□□□□□ -0.57
VRK3-202ENST00000377011 TIGD6Q17RP2 521 aa11.5□□□□□ -0.57
VRK3-202ENST00000377011 FAM214AQ32MH5 1076 aa11.5□□□□□ -0.57
VRK3-202ENST00000377011 TIMM50Q3ZCQ8 353 aa11.5□□□□□ -0.57
VRK3-202ENST00000377011 ASPGQ86U10 573 aa11.5□□□□□ -0.57
VRK3-202ENST00000377011 LSM14AQ8ND56 463 aaKnown RBP11.5□□□□□ -0.57
VRK3-202ENST00000377011 PSMA8Q8TAA3 256 aa11.5□□□□□ -0.57
VRK3-202ENST00000377011 GGHQ92820 318 aa11.5□□□□□ -0.57
VRK3-202ENST00000377011 MAL2Q969L2 176 aa11.5□□□□□ -0.57
VRK3-202ENST00000377011 RERGQ96A58 199 aaPredicted RBP11.5□□□□□ -0.57
VRK3-202ENST00000377011 KCNC2Q96PR1 638 aa11.5□□□□□ -0.57
VRK3-202ENST00000377011 NUDT9Q9BW91 350 aa11.5□□□□□ -0.57
VRK3-202ENST00000377011 CDCA4Q9BXL8 241 aa11.5□□□□□ -0.57
VRK3-202ENST00000377011 RBCK1Q9BYM8 510 aa11.5□□□□□ -0.57
VRK3-202ENST00000377011 PCBD2Q9H0N5 130 aa11.5□□□□□ -0.57
VRK3-202ENST00000377011 SLC26A1Q9H2B4 701 aa11.5□□□□□ -0.57
VRK3-202ENST00000377011 ZBTB20Q9HC78 741 aaPredicted RBP11.5□□□□□ -0.57
VRK3-202ENST00000377011 HCN3Q9P1Z3 774 aa11.5□□□□□ -0.57
VRK3-202ENST00000377011 GPN3Q9UHW5 284 aaPredicted RBP11.5□□□□□ -0.57
VRK3-202ENST00000377011 FAM32AQ9Y421 112 aaKnown RBP11.5□□□□□ -0.57
VRK3-202ENST00000377011 TESMINQ9Y4I5 508 aa11.5□□□□□ -0.57
VRK3-202ENST00000377011 ENPP4Q9Y6X5 453 aa11.5□□□□□ -0.57
VRK3-202ENST00000377011 CNTRLQ7Z7A1 2325 aa11.5□□□□□ -0.57
VRK3-202ENST00000377011 M0R082 166 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 RDH16O75452 317 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 SEMA3DO95025 777 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 C6orf47O95873 294 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 RECKO95980 971 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 SERPIND1P05546 499 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 ZGLP1P0C6A0 271 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 PIPP12273 146 aaPredicted RBP11.49□□□□□ -0.57
VRK3-202ENST00000377011 ETFAP13804 333 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 CBLP22681 906 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 UQCRC2P22695 453 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 CDC42P60953 191 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 ZNF45Q02386 682 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 PRKCDQ05655 676 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 Q0VFX4 171 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 FAAH2Q6GMR7 532 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 KIRREL2Q6UWL6 708 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 BTLAQ7Z6A9 289 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 CADM3Q8N126 398 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 FDCSPQ8NFU4 85 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 CREB3L4Q8TEY5 395 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 RHNO1Q9BSD3 238 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 SARGQ9BW04 601 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 YIPF2Q9BWQ6 316 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 SLC25A18Q9H1K4 315 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 IMPAD1Q9NX62 359 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 P4HTMQ9NXG6 502 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 AHSPQ9NZD4 102 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 TRPC4Q9UBN4 977 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 AASSQ9UDR5 926 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 ZNF451Q9Y4E5 1061 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 MYO18BQ8IUG5 2567 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 IGLV3-12A0A075B6K2 115 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 A0A0G2JN53 185 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 TRBC2A0A5B9 178 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 HTR3EA5X5Y0 456 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms