RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 ZSWIM3Q96MP5 696 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 TBX5Q99593 518 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 FAIM2Q9BWQ8 316 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 C1QTNF7Q9BXJ2 289 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 CFHR5Q9BXR6 569 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 COPZ2Q9P299 210 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 UBQLN2Q9UHD9 624 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 NTNG1Q9Y2I2 539 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 SLC9B1P1A6NJY1 282 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 GLOD5A6NK44 160 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 KPNA3O00505 521 aaPredicted RBP19.73■□□□□ 0.75
UPF3A-202ENST00000375299 MAN2B1O00754 1011 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 ERAL1O75616 437 aaKnown RBP19.73■□□□□ 0.75
UPF3A-202ENST00000375299 SULT1A3P0DMM9 295 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 SULT1A4P0DMN0 295 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 PEPDP12955 493 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 LAG3P18627 525 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 GCGRP47871 477 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 ZNF81P51508 661 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 CAMK2DQ13557 499 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 ARHGAP19Q14CB8 494 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 ARL9Q6T311 187 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 MBOAT2Q6ZWT7 520 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 KIAA0907Q7Z7F0 614 aaPredicted RBP19.73■□□□□ 0.75
UPF3A-202ENST00000375299 TMEM99Q8N816 258 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 TFGQ92734 400 aaPredicted RBP19.73■□□□□ 0.75
UPF3A-202ENST00000375299 YIPF5Q969M3 257 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 ZG16BQ96DA0 208 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 NXPE2Q96DL1 559 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 OR7D2Q96RA2 312 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 POLMQ9NP87 494 aaPredicted RBP19.73■□□□□ 0.75
UPF3A-202ENST00000375299 SPHK2Q9NRA0 654 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.73■□□□□ 0.75
UPF3A-202ENST00000375299 EVA1BQ9NVM1 165 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 PRKAB1Q9Y478 270 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 PCYT1BQ9Y5K3 369 aaPredicted RBP19.73■□□□□ 0.75
UPF3A-202ENST00000375299 GPR171O14626 319 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 MPC2O95563 127 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 SERPIND1P05546 499 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 TBXA2RP21731 343 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 DNASE1P24855 282 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 MFSD13AQ14CX5 517 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 NIPAL3Q6P499 406 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 PLBD1Q6P4A8 553 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 TMEM65Q6PI78 240 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 ZNF793Q6ZN11 406 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 SIAH3Q8IW03 269 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 OR56A1Q8NGH5 318 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 MSANTD3Q96H12 275 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 CAPNS2Q96L46 248 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 CACNG6Q9BXT2 260 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 CD3GP09693 182 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 CD53P19397 219 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 SSTR2P30874 369 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 AHRP35869 848 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 ST3GAL2Q16842 350 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 GSG1Q2KHT4 349 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 C6orf132Q5T0Z8 1188 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 ANKRD33Q7Z3H0 272 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 GDF7Q7Z4P5 450 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 TMEM255BQ8WV15 326 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 ZFPM2Q8WW38 1151 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 MS4A3Q96HJ5 214 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 ARPC5LQ9BPX5 153 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 PITHD1Q9GZP4 211 aaPredicted RBP19.72■□□□□ 0.75
UPF3A-202ENST00000375299 DLL4Q9NR61 685 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 UCKL1Q9NWZ5 548 aa19.72■□□□□ 0.75
UPF3A-202ENST00000375299 ZC3H12DA2A288 527 aaKnown RBP19.71■□□□□ 0.75
UPF3A-202ENST00000375299 LCMT2O60294 686 aaKnown RBP19.71■□□□□ 0.75
UPF3A-202ENST00000375299 THY1P04216 161 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 RGS8P57771 180 aaPredicted RBP19.71■□□□□ 0.75
UPF3A-202ENST00000375299 POU6F2P78424 691 aaPredicted RBP19.71■□□□□ 0.75
UPF3A-202ENST00000375299 DUSP2Q05923 314 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 TRAM1Q15629 374 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 ZNF750Q32MQ0 723 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 LY6G5CQ5SRR4 150 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 ZNF765Q7L2R6 523 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 ADCK2Q7Z695 626 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 GIMAP1Q8WWP7 306 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 NACC2Q96BF6 587 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 MOAP1Q96BY2 351 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 SLC41A3Q96GZ6 507 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 PCBD2Q9H0N5 130 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 KLHL28Q9NXS3 571 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 TMEM5Q9Y2B1 443 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 DAPL1A0PJW8 107 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 H2AFB2P0C5Z0 115 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 METAP1P53582 386 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 RAG2P55895 527 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 SRP54P61011 504 aaKnown RBP19.71■□□□□ 0.75
UPF3A-202ENST00000375299 DEFB103AP81534 67 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 SLC25A35Q3KQZ1 300 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 RNASE12Q5GAN4 147 aaKnown RBP19.71■□□□□ 0.75
UPF3A-202ENST00000375299 RTL4Q6ZR62 310 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 MEPCEQ7L2J0 689 aaKnown RBP19.71■□□□□ 0.75
UPF3A-202ENST00000375299 CEACAM19Q7Z692 300 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 FGD2Q7Z6J4 655 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 CCDC116Q8IYX3 515 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 PCNPQ8WW12 178 aaKnown RBP19.71■□□□□ 0.75
UPF3A-202ENST00000375299 MCHR1Q99705 422 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms