RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 MED11Q9P086 117 aa19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 FXYD6-FXYD2A0A087WZ82 144 aa19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 TRBV5-4A0A0C4DH59 114 aa19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 PITPNAQ00169 270 aa19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 KRT78Q8N1N4 520 aa19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 OR1M1Q8NGA1 313 aa19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 OR52N1Q8NH53 320 aa19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 KAT2AQ92830 837 aa19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 TMEM19Q96HH6 336 aa19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 IFT27Q9BW83 186 aa19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 BTBD1Q9H0C5 482 aa19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 FXYD6Q9H0Q3 95 aa19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 KLHL1Q9NR64 748 aa19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 CTPS2Q9NRF8 586 aa19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 ZNF275Q9NSD4 429 aaPredicted RBP19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 ACAD8Q9UKU7 415 aa19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 GPR31O00270 319 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 CKBP12277 381 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 ACP5P13686 325 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 SNRPBP14678 240 aaKnown RBP19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 TBXA2RP21731 343 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 ATP6V1E1P36543 226 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 CCR8P51685 355 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 CCR9P51686 369 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 OC90Q02509 493 aaPredicted RBP19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 MRPL58Q14197 206 aaKnown RBP19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 ZNF613Q6PF04 617 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 HAGHLQ6PII5 290 aaPredicted RBP19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 RSPO2Q6UXX9 243 aaPredicted RBP19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 SLC16A13Q7RTY0 426 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 HDDC3Q8N4P3 179 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 OR10K1Q8NGX5 313 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 PPCDCQ96CD2 204 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 ORAI3Q9BRQ5 295 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 NANSQ9NR45 359 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 MARK1Q9P0L2 795 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 NFKBIL1Q9UBC1 381 aaPredicted RBP19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 RCE1Q9Y256 329 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 SCN8AQ9UQD0 1980 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 M0R3H8 397 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 CLDN7O95471 211 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 GLDNQ6ZMI3 551 aaPredicted RBP19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 COMTD1Q86VU5 262 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 CPXM2Q8N436 756 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 RAB8BQ92930 207 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 RGMAQ96B86 450 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 ELP4Q96EB1 424 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 RRAGCQ9HB90 399 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 ZFYVE1Q9HBF4 777 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 HRASLSQ9HDD0 168 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 EQTNQ9NQ60 294 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 SLC22A11Q9NSA0 550 aa19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 MBD1Q9UIS9 605 aaPredicted RBP19.24■□□□□ 0.67
TMEFF1-201ENST00000374879 CARNS1A5YM72 827 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 VNN2O95498 520 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 FURINP09958 794 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 IFNGR1P15260 489 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 PRMT2P55345 433 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 SMIM11AP58511 58 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 RPS13P62277 151 aaKnown RBP19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 ZC3H14Q6PJT7 736 aaKnown RBP19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 TSPAN33Q86UF1 283 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 LDLRAD3Q86YD5 345 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 CBLN2Q8IUK8 224 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 BBS1Q8NFJ9 593 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 TEX47Q8TBZ9 253 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 ZNF354BQ96LW1 612 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 OR1F2PQ96R84 312 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 SMAD5Q99717 465 aaKnown RBP19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 FN3KQ9H479 309 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 A0A1W2PRB8 838 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 PGRMC2O15173 223 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 SNAPC5O75971 98 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 SNAPINO95295 136 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 C8GP07360 202 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 SPP1P10451 314 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 ANXA7P20073 488 aaKnown RBP19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 PVALBP20472 110 aaPredicted RBP19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 ITGB8P26012 769 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 CSNK1DP48730 415 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 RNF144AP50876 292 aaPredicted RBP19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 NDUFA9Q16795 377 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 ENTPD8Q5MY95 495 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 FAM74A1Q5RGS3 127 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 IER5LQ5T953 404 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 ELP2Q6IA86 826 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 C1orf94Q6P1W5 598 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 LRRN1Q6UXK5 716 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 FAM98AQ8NCA5 519 aaKnown RBP19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 CAMKVQ8NCB2 501 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 SORCS1Q8WY21 1168 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 GCDHQ92947 438 aaPredicted RBP19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 FNDC11Q9BVV2 318 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 MAN2C1Q9NTJ4 1040 aa19.23■□□□□ 0.67
TMEFF1-201ENST00000374879 H3BNC9 293 aa19.22■□□□□ 0.67
TMEFF1-201ENST00000374879 SAP18O00422 153 aaKnown RBP19.22■□□□□ 0.67
TMEFF1-201ENST00000374879 ZDHHC11BP0C7U3 371 aa19.22■□□□□ 0.67
TMEFF1-201ENST00000374879 CPN1P15169 458 aa19.22■□□□□ 0.67
TMEFF1-201ENST00000374879 RFC3P40938 356 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms